Cow genome map

Conread name: Ss1.1-Ova1-OVRM10117D04.5

Conread position: 3-268
Cow position: chrX:24288067-24287805 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 104, 53

Conread position: 3-341
Cow position: chrX:917506-917169 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 23

Conread position: 5-279
Cow position: chrX:25207983-25207718 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 21

Conread position: 5-280
Cow position: chrX:5872177-5872457 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 9-279
Cow position: chrX:27509156-27508887 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 23

Conread position: 21-279
Cow position: chrX:17725850-17726115 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 8

Conread position: 22-187
Cow position: chrX:42994490-42994660 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 22-279
Cow position: chrX:48385485-48385230 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 116

Conread position: 23-189
Cow position: chrX:20752131-20752304 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 23-213
Cow position: chrX:6234576-6234376 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 84, 0

Conread position: 23-279
Cow position: chrX:878500-878241 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 118, 33

Conread position: 23-279
Cow position: chrX:6407424-6407682 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 35

Conread position: 23-279
Cow position: chrX:8730963-8731232 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 191

Conread position: 23-279
Cow position: chrX:9425863-9425614 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 33

Conread position: 23-279
Cow position: chrX:29601953-29601689 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 33

Conread position: 23-279
Cow position: chrX:40035565-40035301 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 33

Conread position: 23-279
Cow position: chrX:43527380-43527647 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 34, 124

Conread position: 24-168
Cow position: chrX:30832969-30832824 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 32

Conread position: 24-174
Cow position: chrX:17908408-17908254 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 83, 32

Conread position: 24-225
Cow position: chrX:13265747-13265542 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 34

Conread position: 24-249
Cow position: chrX:29876192-29875967 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 32

Conread position: 24-277
Cow position: chrX:34315403-34315658 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 24-277
Cow position: chrX:37910324-37910581 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 32

Conread position: 24-279
Cow position: chrX:4043974-4043728 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 24-279
Cow position: chrX:7178781-7179033 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 19

Conread position: 24-279
Cow position: chrX:14973863-14973607 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 159

Conread position: 24-279
Cow position: chrX:17541840-17542098 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 9, 43

Conread position: 24-279
Cow position: chrX:24331655-24331915 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 7, 113

Conread position: 24-279
Cow position: chrX:35268760-35269000 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 124, 32

Conread position: 24-279
Cow position: chrX:35288537-35288794 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 74, 6

Conread position: 24-279
Cow position: chrX:41068599-41068864 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 70, 14

Conread position: 24-279
Cow position: chrX:42247307-42247043 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 47

Conread position: 24-284
Cow position: chrX:44961624-44961894 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 268

Conread position: 24-329
Cow position: chrX:37574729-37575033 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 259, 32

Conread position: 24-332
Cow position: chrX:23497792-23497477 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 34

Conread position: 25-279
Cow position: chrX:42873271-42873524 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 30, 15

Conread position: 26-232
Cow position: chrX:11844367-11844149 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 26-232
Cow position: chrX:46722857-46722642 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 26-242
Cow position: chrX:22921196-22921423 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 26-273
Cow position: chrX:40480989-40480734 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 108

Conread position: 26-279
Cow position: chrX:13382209-13382464 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 75, 176

Conread position: 26-279
Cow position: chrX:42235650-42235385 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 12, 39

Conread position: 27-232
Cow position: chrX:34662969-34662754 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 111

Conread position: 27-245
Cow position: chrX:44873680-44873456 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 178

Conread position: 27-252
Cow position: chrX:38936581-38936812 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 29

Conread position: 27-272
Cow position: chrX:4768625-4768864 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 74, 29

Conread position: 27-272
Cow position: chrX:40269369-40269624 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 29

Conread position: 27-278
Cow position: chrX:27394138-27393888 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 29

Conread position: 27-279
Cow position: chrX:6260277-6260010 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 55, 183

Conread position: 27-293
Cow position: chrX:5680054-5679777 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 27-366
Cow position: chrX:39558471-39558129 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 37

Conread position: 28-167
Cow position: chrX:23970266-23970406 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 28

Conread position: 28-185
Cow position: chrX:17497967-17498130 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 79, 28

Conread position: 28-188
Cow position: chrX:34270283-34270450 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 28-191
Cow position: chrX:35681220-35681393 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 28-192
Cow position: chrX:41743793-41743969 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 28-196
Cow position: chrX:40647869-40648044 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 11

Conread position: 28-205
Cow position: chrX:40116303-40116485 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 28

Conread position: 28-207
Cow position: chrX:14900840-14900666 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 28-218
Cow position: chrX:24105508-24105702 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 36, 98

Conread position: 28-221
Cow position: chrX:19003182-19003374 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 28

Conread position: 28-225
Cow position: chrX:29723623-29723825 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 125

Conread position: 28-227
Cow position: chrX:20709957-20710161 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 29

Conread position: 28-230
Cow position: chrX:12405505-12405291 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 28-230
Cow position: chrX:27946177-27945964 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 28-230
Cow position: chrX:29542337-29542127 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 28

Conread position: 28-232
Cow position: chrX:15814969-15815176 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 34

Conread position: 28-232
Cow position: chrX:16996385-16996584 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 54

Conread position: 28-232
Cow position: chrX:18111272-18111470 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 54

Conread position: 28-232
Cow position: chrX:21642596-21642390 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 50

Conread position: 28-232
Cow position: chrX:27514754-27514950 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 63

Conread position: 28-238
Cow position: chrX:26440897-26440687 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 71, 104

Conread position: 28-240
Cow position: chrX:7571786-7572005 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 81, 28

Conread position: 28-240
Cow position: chrX:22812946-22813162 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 153

Conread position: 28-241
Cow position: chrX:2467765-2467985 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 28-242
Cow position: chrX:22454210-22453996 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 11

Conread position: 28-242
Cow position: chrX:40320287-40320508 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 107

Conread position: 28-243
Cow position: chrX:45005512-45005727 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 54

Conread position: 28-244
Cow position: chrX:13912961-13913179 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 28

Conread position: 28-244
Cow position: chrX:27680281-27680502 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 56, 28

Conread position: 28-260
Cow position: chrX:21004564-21004803 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 35

Conread position: 28-268
Cow position: chrX:34532403-34532648 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 28

Conread position: 28-270
Cow position: chrX:19690103-19690345 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 78

Conread position: 28-271
Cow position: chrX:1514525-1514288 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 112

Conread position: 28-272
Cow position: chrX:27432032-27431786 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 28

Conread position: 28-272
Cow position: chrX:36067899-36068147 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 20

Conread position: 28-272
Cow position: chrX:38853080-38853329 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 28

Conread position: 28-272
Cow position: chrX:40557799-40557547 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 79, 28

Conread position: 28-274
Cow position: chrX:19273841-19273573 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 29

Conread position: 28-274
Cow position: chrX:23514133-23513887 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 28-274
Cow position: chrX:36778293-36778532 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 92

Conread position: 28-274
Cow position: chrX:37836470-37836712 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 107

Conread position: 28-275
Cow position: chrX:616380-616124 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 79, 28

Conread position: 28-275
Cow position: chrX:15007268-15007015 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 245

Conread position: 28-275
Cow position: chrX:38218593-38218851 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 28

Conread position: 28-275
Cow position: chrX:42171414-42171162 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 34

Conread position: 28-276
Cow position: chrX:619122-618873 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 81, 28

Conread position: 28-277
Cow position: chrX:11085175-11084928 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 119

Conread position: 28-277
Cow position: chrX:31311911-31312166 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 28

Conread position: 28-277
Cow position: chrX:34543668-34543921 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 74

Conread position: 28-278
Cow position: chrX:3654490-3654746 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 28

Conread position: 28-278
Cow position: chrX:5679684-5679434 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 113

Conread position: 28-278
Cow position: chrX:27228005-27228265 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 126

Conread position: 28-278
Cow position: chrX:36355997-36356243 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 66, 28

Conread position: 28-278
Cow position: chrX:41992164-41991906 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 176

Conread position: 28-279
Cow position: chrX:1176097-1175851 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 64, 35

Conread position: 28-279
Cow position: chrX:1616162-1615909 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 73, 28

Conread position: 28-279
Cow position: chrX:3579826-3580083 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 117

Conread position: 28-279
Cow position: chrX:4279229-4278979 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 83

Conread position: 28-279
Cow position: chrX:4403196-4403456 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 28-279
Cow position: chrX:4825943-4825697 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 24

Conread position: 28-279
Cow position: chrX:5118620-5118359 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 89, 28

Conread position: 28-279
Cow position: chrX:6278620-6278359 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 28-279
Cow position: chrX:7695630-7695887 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 64, 79

Conread position: 28-279
Cow position: chrX:9416811-9416545 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 79, 28

Conread position: 28-279
Cow position: chrX:9635299-9635052 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 112, 28

Conread position: 28-279
Cow position: chrX:10831611-10831349 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 36

Conread position: 28-279
Cow position: chrX:11633560-11633821 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 28-279
Cow position: chrX:12309503-12309247 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 15

Conread position: 28-279
Cow position: chrX:12979945-12979695 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 112, 28

Conread position: 28-279
Cow position: chrX:13177583-13177337 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 159, 28

Conread position: 28-279
Cow position: chrX:13647903-13647646 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 28

Conread position: 28-279
Cow position: chrX:14599415-14599671 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 28

Conread position: 28-279
Cow position: chrX:16762648-16762913 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 71

Conread position: 28-279
Cow position: chrX:20677254-20677506 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 15

Conread position: 28-279
Cow position: chrX:21593169-21593426 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 114

Conread position: 28-279
Cow position: chrX:21986410-21986152 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 34

Conread position: 28-279
Cow position: chrX:22387361-22387111 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 79, 122

Conread position: 28-279
Cow position: chrX:22821933-22822185 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 34

Conread position: 28-279
Cow position: chrX:25816018-25815763 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 28

Conread position: 28-279
Cow position: chrX:27145505-27145743 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 28-279
Cow position: chrX:27446572-27446825 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 121

Conread position: 28-279
Cow position: chrX:29680378-29680122 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 28-279
Cow position: chrX:31252300-31252546 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 79, 28

Conread position: 28-279
Cow position: chrX:31294675-31294433 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 28

Conread position: 28-279
Cow position: chrX:31442940-31442690 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 64

Conread position: 28-279
Cow position: chrX:31729325-31729581 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 81, 42

Conread position: 28-279
Cow position: chrX:32820910-32821167 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 108

Conread position: 28-279
Cow position: chrX:33493660-33493915 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 28

Conread position: 28-279
Cow position: chrX:34238602-34238860 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 57

Conread position: 28-279
Cow position: chrX:34401880-34402145 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 76, 28

Conread position: 28-279
Cow position: chrX:34505165-34504910 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 77, 28

Conread position: 28-279
Cow position: chrX:35383134-35382898 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 28

Conread position: 28-279
Cow position: chrX:36283231-36283478 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 92

Conread position: 28-279
Cow position: chrX:37489608-37489857 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 113

Conread position: 28-279
Cow position: chrX:37781229-37780970 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 28

Conread position: 28-279
Cow position: chrX:38006882-38006632 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 28

Conread position: 28-279
Cow position: chrX:38094641-38094381 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 118

Conread position: 28-279
Cow position: chrX:38549334-38549586 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 35

Conread position: 28-279
Cow position: chrX:38642143-38642388 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 28

Conread position: 28-279
Cow position: chrX:38963987-38964247 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 24

Conread position: 28-279
Cow position: chrX:40685449-40685189 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 38

Conread position: 28-279
Cow position: chrX:41870955-41871206 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 110, 34

Conread position: 28-279
Cow position: chrX:42492633-42492385 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 105

Conread position: 28-279
Cow position: chrX:43115033-43115289 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 29

Conread position: 28-279
Cow position: chrX:46433368-46433630 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 28, 0

Conread position: 28-279
Cow position: chrX:46532624-46532356 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 28-280
Cow position: chrX:38728619-38728874 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 135

Conread position: 28-282
Cow position: chrX:9365793-9365534 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 34

Conread position: 28-284
Cow position: chrX:15147307-15147053 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 35, 116

Conread position: 28-288
Cow position: chrX:34502804-34503068 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 28-290
Cow position: chrX:7161942-7162207 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 28

Conread position: 28-329
Cow position: chrX:11939045-11938736 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 34

Conread position: 28-332
Cow position: chrX:5638283-5637959 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 48, 28

Conread position: 28-332
Cow position: chrX:30543405-30543088 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 28

Conread position: 28-333
Cow position: chrX:35542777-35543076 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 79, 28

Conread position: 28-342
Cow position: chrX:6488458-6488795 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 110

Conread position: 28-344
Cow position: chrX:11073306-11072987 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 15

Conread position: 28-347
Cow position: chrX:29120928-29121254 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 28-348
Cow position: chrX:10412103-10411785 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 28-350
Cow position: chrX:4399011-4399357 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 28

Conread position: 28-350
Cow position: chrX:7646138-7646471 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 79, 28

Conread position: 28-350
Cow position: chrX:20584206-20584550 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 28

Conread position: 28-351
Cow position: chrX:7721871-7722214 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 28

Conread position: 28-352
Cow position: chrX:40692869-40692533 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 249

Conread position: 28-362
Cow position: chrX:22624366-22624710 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 28

Conread position: 28-366
Cow position: chrX:25713679-25714029 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 28

Conread position: 28-367
Cow position: chrX:8925583-8925933 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 73, 28

Conread position: 28-413
Cow position: chrX:1499547-1499964 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 29-167
Cow position: chrX:38439361-38439508 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 27

Conread position: 29-188
Cow position: chrX:15139662-15139499 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 27

Conread position: 29-196
Cow position: chrX:9855187-9855354 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 97, 72

Conread position: 29-196
Cow position: chrX:9954028-9954195 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 119, 72

Conread position: 29-203
Cow position: chrX:39938637-39938460 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 29-232
Cow position: chrX:23563910-23563699 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 106

Conread position: 29-232
Cow position: chrX:47166003-47165794 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 32, 48

Conread position: 29-240
Cow position: chrX:15596924-15597127 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 65

Conread position: 29-240
Cow position: chrX:34454547-34454757 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 104

Conread position: 29-242
Cow position: chrX:48646717-48646504 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 68

Conread position: 29-246
Cow position: chrX:36061038-36061266 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 29-259
Cow position: chrX:21566285-21566526 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 29-272
Cow position: chrX:47481683-47481928 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 125

Conread position: 29-278
Cow position: chrX:23785540-23785785 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 82

Conread position: 29-279
Cow position: chrX:5919379-5919636 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 27

Conread position: 29-279
Cow position: chrX:11655975-11656220 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 0

Conread position: 29-279
Cow position: chrX:26881685-26881424 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 27

Conread position: 29-279
Cow position: chrX:27705464-27705725 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 26, 101

Conread position: 29-279
Cow position: chrX:34411727-34411985 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 19

Conread position: 29-279
Cow position: chrX:34554607-34554862 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 97

Conread position: 29-279
Cow position: chrX:38227212-38226971 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 122

Conread position: 29-279
Cow position: chrX:41879049-41878795 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 73, 27

Conread position: 29-279
Cow position: chrX:45598717-45598466 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 80, 23

Conread position: 29-279
Cow position: chrX:45976803-45977065 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 259

Conread position: 29-286
Cow position: chrX:11082731-11082477 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 27

Conread position: 29-327
Cow position: chrX:25338066-25338379 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 27

Conread position: 29-332
Cow position: chrX:17964636-17964326 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 27

Conread position: 29-345
Cow position: chrX:41733305-41732987 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 14

Conread position: 29-351
Cow position: chrX:6563403-6563739 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 26

Conread position: 29-371
Cow position: chrX:39126216-39126561 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 80, 26

Conread position: 29-373
Cow position: chrX:39415484-39415135 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 33

Conread position: 30-192
Cow position: chrX:42461861-42461692 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 34

Conread position: 30-340
Cow position: chrX:17662709-17662391 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 26

Conread position: 32-195
Cow position: chrX:36961525-36961696 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 115

Conread position: 32-197
Cow position: chrX:42874867-42875040 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 32-200
Cow position: chrX:41167079-41166902 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 32-219
Cow position: chrX:11589702-11589509 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 75, 0

Conread position: 32-232
Cow position: chrX:37843606-37843809 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 109

Conread position: 32-245
Cow position: chrX:27685133-27685354 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 75, 0

Conread position: 32-267
Cow position: chrX:27516414-27516646 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 160

Conread position: 32-270
Cow position: chrX:4269181-4268934 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 124

Conread position: 32-271
Cow position: chrX:6265711-6265468 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 18

Conread position: 32-272
Cow position: chrX:23091767-23092003 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 78, 24

Conread position: 32-272
Cow position: chrX:23561762-23561990 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 183, 46

Conread position: 32-272
Cow position: chrX:37232299-37232539 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 24

Conread position: 32-274
Cow position: chrX:20151732-20151990 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 185

Conread position: 32-277
Cow position: chrX:42927933-42927687 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 30

Conread position: 32-279
Cow position: chrX:4632966-4632716 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 35, 104

Conread position: 32-279
Cow position: chrX:7351185-7351436 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 184

Conread position: 32-279
Cow position: chrX:9201436-9201687 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 77, 24

Conread position: 32-279
Cow position: chrX:11717898-11717644 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 73, 31

Conread position: 32-279
Cow position: chrX:14275848-14275604 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 107, 24

Conread position: 32-279
Cow position: chrX:16416396-16416638 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 58

Conread position: 32-279
Cow position: chrX:20340002-20339755 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 82, 18

Conread position: 32-279
Cow position: chrX:22074686-22074939 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 24

Conread position: 32-279
Cow position: chrX:27174881-27175137 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 75, 163

Conread position: 32-279
Cow position: chrX:30962988-30962737 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 101

Conread position: 32-279
Cow position: chrX:33466497-33466763 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 38

Conread position: 32-279
Cow position: chrX:34565169-34565422 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 69, 24

Conread position: 32-279
Cow position: chrX:34792422-34792174 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 24

Conread position: 32-279
Cow position: chrX:35885844-35885588 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 32-279
Cow position: chrX:37986119-37986364 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 31

Conread position: 32-279
Cow position: chrX:41027043-41027298 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 32-279
Cow position: chrX:42381216-42380973 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 53

Conread position: 32-279
Cow position: chrX:47342013-47342254 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 31

Conread position: 32-295
Cow position: chrX:13853508-13853775 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 11

Conread position: 32-311
Cow position: chrX:44396905-44397183 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 69, 24

Conread position: 33-160
Cow position: chrX:32747570-32747703 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 33-205
Cow position: chrX:19188824-19188996 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 106

Conread position: 33-209
Cow position: chrX:20790808-20790982 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 23

Conread position: 33-232
Cow position: chrX:842043-842249 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 131

Conread position: 33-268
Cow position: chrX:18695036-18694803 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 76, 23

Conread position: 33-271
Cow position: chrX:35413507-35413741 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 32

Conread position: 33-271
Cow position: chrX:42470054-42469810 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 23

Conread position: 33-279
Cow position: chrX:7710656-7710400 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 0

Conread position: 33-279
Cow position: chrX:9651138-9650885 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 23

Conread position: 33-279
Cow position: chrX:12437365-12437133 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 115, 23

Conread position: 33-279
Cow position: chrX:17888527-17888284 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 33-279
Cow position: chrX:21672442-21672699 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 108

Conread position: 33-279
Cow position: chrX:28866112-28865867 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 29

Conread position: 33-279
Cow position: chrX:29289467-29289717 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 44

Conread position: 33-279
Cow position: chrX:38654543-38654302 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 23

Conread position: 33-279
Cow position: chrX:45113504-45113760 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 31, 112

Conread position: 33-332
Cow position: chrX:32431511-32431819 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 23

Conread position: 33-340
Cow position: chrX:1503225-1503537 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 68, 23

Conread position: 33-350
Cow position: chrX:10959510-10959180 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 68, 23

Conread position: 33-385
Cow position: chrX:33539052-33539424 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 59, 23

Conread position: 34-272
Cow position: chrX:45670115-45670354 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 22

Conread position: 35-279
Cow position: chrX:17231620-17231875 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 36-225
Cow position: chrX:4992126-4991928 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 101

Conread position: 36-232
Cow position: chrX:17949600-17949401 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 103

Conread position: 36-232
Cow position: chrX:45403940-45403733 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 36-242
Cow position: chrX:46546987-46546773 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 36-253
Cow position: chrX:12249693-12249931 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 20

Conread position: 36-257
Cow position: chrX:26625780-26625554 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 94, 20

Conread position: 36-272
Cow position: chrX:6544146-6544386 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 20

Conread position: 36-274
Cow position: chrX:44054692-44054936 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 23, 99

Conread position: 36-277
Cow position: chrX:8797142-8797386 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 164

Conread position: 36-277
Cow position: chrX:34441562-34441317 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 133

Conread position: 36-277
Cow position: chrX:45099012-45099265 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 87

Conread position: 36-279
Cow position: chrX:8869512-8869262 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 20

Conread position: 36-279
Cow position: chrX:15545783-15546021 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 87

Conread position: 36-279
Cow position: chrX:29194124-29194369 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 70, 20

Conread position: 36-279
Cow position: chrX:29544988-29544738 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 52, 101

Conread position: 36-279
Cow position: chrX:31436368-31436614 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 84, 20

Conread position: 36-279
Cow position: chrX:41526631-41526390 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 20

Conread position: 36-279
Cow position: chrX:41884524-41884273 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 20

Conread position: 36-279
Cow position: chrX:44657073-44656818 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 141

Conread position: 36-279
Cow position: chrX:45502042-45502285 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 109, 28

Conread position: 36-279
Cow position: chrX:46587707-46587961 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 36-305
Cow position: chrX:43567812-43568081 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 65, 20

Conread position: 36-315
Cow position: chrX:34222600-34222889 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 210

Conread position: 36-317
Cow position: chrX:32420109-32420388 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 20

Conread position: 36-329
Cow position: chrX:11856318-11856619 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 218

Conread position: 36-340
Cow position: chrX:11614589-11614904 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 109

Conread position: 36-340
Cow position: chrX:23940135-23939844 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 20

Conread position: 36-347
Cow position: chrX:20801665-20801973 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 203
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 20

Conread position: 37-271
Cow position: chrX:10865977-10865742 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 99

Conread position: 37-271
Cow position: chrX:28013557-28013312 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 235

Conread position: 37-272
Cow position: chrX:29229901-29230131 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 19

Conread position: 37-273
Cow position: chrX:7277810-7278044 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 37-279
Cow position: chrX:8917287-8917532 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 107

Conread position: 37-279
Cow position: chrX:24424497-24424262 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 37-295
Cow position: chrX:41122958-41123216 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 135

Conread position: 38-224
Cow position: chrX:47657276-47657470 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 56

Conread position: 38-332
Cow position: chrX:30421037-30420747 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 239, 18

Conread position: 38-351
Cow position: chrX:35224189-35224513 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 7

Conread position: 39-203
Cow position: chrX:35848454-35848627 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 130

Conread position: 39-232
Cow position: chrX:27119592-27119789 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 93

Conread position: 39-268
Cow position: chrX:47186428-47186199 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 105

Conread position: 39-279
Cow position: chrX:151795-152039 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 24, 85

Conread position: 39-279
Cow position: chrX:13923764-13924003 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 102

Conread position: 39-279
Cow position: chrX:20697713-20697470 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 20, 93

Conread position: 39-279
Cow position: chrX:37955726-37955986 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 59, 17

Conread position: 39-279
Cow position: chrX:43730325-43730085 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 17

Conread position: 39-279
Cow position: chrX:45875284-45875531 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 85

Conread position: 39-279
Cow position: chrX:46072927-46072678 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 17

Conread position: 39-290
Cow position: chrX:40567496-40567771 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 39-293
Cow position: chrX:37072301-37072545 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 234, 17

Conread position: 39-295
Cow position: chrX:37119488-37119746 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 16

Conread position: 39-326
Cow position: chrX:30133429-30133134 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 98

Conread position: 40-278
Cow position: chrX:6690363-6690122 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 49

Conread position: 40-279
Cow position: chrX:169646-169407 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 104

Conread position: 40-279
Cow position: chrX:5017520-5017283 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 61, 16

Conread position: 40-279
Cow position: chrX:18204569-18204324 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 102

Conread position: 40-279
Cow position: chrX:33639865-33640114 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 41-271
Cow position: chrX:14955870-14955639 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 111

Conread position: 42-278
Cow position: chrX:24365931-24365685 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 204

Conread position: 43-200
Cow position: chrX:12018187-12018352 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 94

Conread position: 43-217
Cow position: chrX:29488105-29487931 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 13

Conread position: 43-240
Cow position: chrX:31949039-31948835 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 43-242
Cow position: chrX:40826857-40826649 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 95

Conread position: 43-273
Cow position: chrX:27301767-27302009 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 187

Conread position: 43-277
Cow position: chrX:17794880-17795118 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 13

Conread position: 43-277
Cow position: chrX:34376844-34377079 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 13

Conread position: 43-278
Cow position: chrX:48044617-48044378 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 109

Conread position: 43-279
Cow position: chrX:12290623-12290858 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 68

Conread position: 43-279
Cow position: chrX:23583459-23583700 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 40

Conread position: 43-279
Cow position: chrX:28878274-28878035 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 76

Conread position: 43-279
Cow position: chrX:33000800-33001045 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 13

Conread position: 43-279
Cow position: chrX:36975846-36976090 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 138

Conread position: 43-279
Cow position: chrX:41674006-41674244 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 101

Conread position: 43-279
Cow position: chrX:46032825-46032588 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 104

Conread position: 44-195
Cow position: chrX:28845728-28845888 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 44-278
Cow position: chrX:16348672-16348434 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 14, 162

Conread position: 44-278
Cow position: chrX:34313927-34314162 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 20

Conread position: 44-279
Cow position: chrX:7718754-7718971 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 12

Conread position: 45-251
Cow position: chrX:45993118-45993340 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 120

Conread position: 45-279
Cow position: chrX:21327802-21328052 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 46-242
Cow position: chrX:15231758-15231558 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 47-277
Cow position: chrX:45968061-45968285 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 47-279
Cow position: chrX:10516157-10516392 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 9

Conread position: 48-271
Cow position: chrX:40283027-40283252 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 158

Conread position: 50-265
Cow position: chrX:47246843-47246632 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 12

Conread position: 50-279
Cow position: chrX:12095870-12095633 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 81

Conread position: 50-279
Cow position: chrX:29549644-29549412 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 162

Conread position: 50-279
Cow position: chrX:37129172-37129408 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 42, 46

Conread position: 50-279
Cow position: chrX:40108608-40108379 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 68

Conread position: 50-293
Cow position: chrX:34837150-34836910 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 6

Conread position: 51-279
Cow position: chrX:161317-161550 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 50, 70

Conread position: 51-291
Cow position: chrX:43779942-43779699 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 107

Conread position: 52-279
Cow position: chrX:27261093-27261331 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 46

Conread position: 53-279
Cow position: chrX:31250293-31250527 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 47, 83

Conread position: 55-287
Cow position: chrX:28134253-28134484 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 43, 82

Conread position: 56-225
Cow position: chrX:42507728-42507563 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 56-229
Cow position: chrX:1572228-1572050 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 82

Conread position: 56-232
Cow position: chrX:4296910-4296733 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 100

Conread position: 56-279
Cow position: chrX:1466070-1466301 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 56-279
Cow position: chrX:5900378-5900601 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 96

Conread position: 56-279
Cow position: chrX:17966257-17966480 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 12

Conread position: 56-279
Cow position: chrX:20168467-20168696 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 51, 212

Conread position: 56-279
Cow position: chrX:20887730-20887501 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 50

Conread position: 56-279
Cow position: chrX:29050156-29050387 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 150

Conread position: 56-279
Cow position: chrX:33654932-33654705 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 36, 81

Conread position: 56-279
Cow position: chrX:44192534-44192305 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 36

Conread position: 56-283
Cow position: chrX:25035470-25035238 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 96

Conread position: 56-286
Cow position: chrX:13868612-13868849 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 123

Conread position: 57-274
Cow position: chrX:31515079-31515308 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 57-279
Cow position: chrX:42855365-42855597 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 58-193
Cow position: chrX:41199018-41199161 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 58-279
Cow position: chrX:31489431-31489659 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 58-279
Cow position: chrX:45884064-45883832 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 58-329
Cow position: chrX:33205053-33204776 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 50, 90

Conread position: 59-279
Cow position: chrX:9252250-9252024 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 102

Conread position: 59-279
Cow position: chrX:40680523-40680753 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 0

Conread position: 59-333
Cow position: chrX:20882025-20881740 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 148

Conread position: 60-279
Cow position: chrX:6559532-6559318 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 65

Conread position: 60-279
Cow position: chrX:36514981-36514753 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 61-279
Cow position: chrX:23562549-23562771 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 73

Conread position: 62-224
Cow position: chrX:47159602-47159436 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 29

Conread position: 63-279
Cow position: chrX:23113194-23113423 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 225

Conread position: 64-279
Cow position: chrX:16575040-16575251 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 35, 69

Conread position: 64-279
Cow position: chrX:41238434-41238216 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 140

Conread position: 66-295
Cow position: chrX:41192627-41192862 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 78, 42

Conread position: 66-299
Cow position: chrX:4289366-4289605 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 23

Conread position: 67-277
Cow position: chrX:39220000-39220216 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 68-278
Cow position: chrX:46771038-46770825 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 197

Conread position: 68-279
Cow position: chrX:36866092-36866311 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 187

Conread position: 69-279
Cow position: chrX:4515606-4515830 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 176

Conread position: 69-295
Cow position: chrX:4153113-4152873 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 70-349
Cow position: chrX:3130498-3130776 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 70

Conread position: 72-268
Cow position: chrX:19469575-19469378 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 75-279
Cow position: chrX:27511360-27511567 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 11, 58

Conread position: 75-279
Cow position: chrX:32978143-32977947 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 78-279
Cow position: chrX:42893854-42894065 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 79-279
Cow position: chrX:48121259-48121058 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 21

Conread position: 84-284
Cow position: chrX:11326159-11325954 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 168

Conread position: 98-290
Cow position: chrX:42499092-42498897 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 114

Conread position: 100-278
Cow position: chrX:18046356-18046534 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 10

Conread position: 100-279
Cow position: chrX:23188818-23188645 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 100-280
Cow position: chrX:48558706-48558886 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 48

Conread position: 101-229
Cow position: chrX:43973504-43973634 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 58

Conread position: 101-271
Cow position: chrX:19394512-19394684 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 101-277
Cow position: chrX:22115356-22115180 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 27

Conread position: 101-278
Cow position: chrX:21665280-21665103 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 47

Conread position: 101-279
Cow position: chrX:126729-126906 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 74

Conread position: 101-284
Cow position: chrX:41271037-41270841 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 101-329
Cow position: chrX:43426252-43426487 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 101-332
Cow position: chrX:2003916-2003689 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 181

Conread position: 101-346
Cow position: chrX:13359459-13359231 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 233, 17

Conread position: 101-366
Cow position: chrX:39352740-39353027 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 82

Conread position: 101-383
Cow position: chrX:2523718-2523448 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 43

Conread position: 103-251
Cow position: chrX:41111683-41111827 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 103-271
Cow position: chrX:29115673-29115837 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 156, 35

Conread position: 103-272
Cow position: chrX:25788934-25788773 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 29

Conread position: 103-278
Cow position: chrX:18964863-18964691 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 146
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 42, 93

Conread position: 103-279
Cow position: chrX:4109152-4109323 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 103-279
Cow position: chrX:19097260-19097080 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 42

Conread position: 103-279
Cow position: chrX:25036949-25037126 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 103-279
Cow position: chrX:29553247-29553424 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 145
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 13

Conread position: 103-279
Cow position: chrX:31627019-31626839 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 108

Conread position: 103-279
Cow position: chrX:32623529-32623709 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 166

Conread position: 103-279
Cow position: chrX:44339362-44339186 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 98

Conread position: 103-281
Cow position: chrX:19943275-19943095 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 35, 120

Conread position: 103-367
Cow position: chrX:27306414-27306695 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 104-279
Cow position: chrX:44703109-44702927 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 48

Conread position: 104-279
Cow position: chrX:46429859-46429680 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 104-285
Cow position: chrX:15820560-15820739 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 105-278
Cow position: chrX:4645948-4645775 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 105-279
Cow position: chrX:28940210-28940384 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 14

Conread position: 105-366
Cow position: chrX:23088828-23089080 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 179, 37

Conread position: 106-280
Cow position: chrX:17956660-17956830 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 107-278
Cow position: chrX:22393020-22392847 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 160

Conread position: 107-279
Cow position: chrX:22915071-22914903 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 107-279
Cow position: chrX:40532078-40531904 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 107-279
Cow position: chrX:42432546-42432370 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 81, 23

Conread position: 109-279
Cow position: chrX:41941594-41941762 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 109-330
Cow position: chrX:35759971-35759738 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 110-279
Cow position: chrX:23498709-23498541 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 98

Conread position: 110-350
Cow position: chrX:10305379-10305132 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 89

Conread position: 114-279
Cow position: chrX:20743575-20743743 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 114-279
Cow position: chrX:32318276-32318445 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 118-290
Cow position: chrX:38967870-38968039 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 20

Conread position: 120-279
Cow position: chrX:25411886-25412044 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 142

Conread position: 120-287
Cow position: chrX:16324032-16323872 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 123-271
Cow position: chrX:48278248-48278392 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 123-306
Cow position: chrX:42836166-42836348 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 172, 7

Conread position: 124-279
Cow position: chrX:42282559-42282715 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 61

Conread position: 124-279
Cow position: chrX:42450033-42449875 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 124-306
Cow position: chrX:27075066-27074884 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 157, 21

Conread position: 125-278
Cow position: chrX:35275969-35276123 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 48

Conread position: 126-295
Cow position: chrX:4037188-4037020 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 22, 118

Conread position: 130-279
Cow position: chrX:3806672-3806821 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 126
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 18, 9

Conread position: 130-279
Cow position: chrX:20678150-20678003 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 60

Conread position: 130-279
Cow position: chrX:29733602-29733453 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 134-278
Cow position: chrX:38587851-38587705 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 134-279
Cow position: chrX:11653759-11653909 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 11

Conread position: 134-332
Cow position: chrX:35278323-35278530 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 203

Conread position: 135-274
Cow position: chrX:16830217-16830354 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 55

Conread position: 135-279
Cow position: chrX:11763005-11762862 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 135-295
Cow position: chrX:46070178-46070014 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 9

Conread position: 135-351
Cow position: chrX:24054668-24054900 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 9

Conread position: 136-279
Cow position: chrX:16984639-16984779 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 137-279
Cow position: chrX:38725804-38725947 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 55

Conread position: 138-279
Cow position: chrX:27668961-27668819 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 138-279
Cow position: chrX:34420732-34420873 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 139-277
Cow position: chrX:6223131-6222991 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 139-279
Cow position: chrX:26205449-26205309 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 139-279
Cow position: chrX:29478722-29478862 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 77

Conread position: 139-279
Cow position: chrX:31829462-31829322 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 139-279
Cow position: chrX:35658801-35658935 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 139-279
Cow position: chrX:42506229-42506094 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 69

Conread position: 144-279
Cow position: chrX:24170725-24170591 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 145-259
Cow position: chrX:6213875-6213989 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 145-279
Cow position: chrX:10075978-10076110 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 145-279
Cow position: chrX:32910109-32910238 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 147-268
Cow position: chrX:37665698-37665819 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 147-279
Cow position: chrX:1122536-1122408 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 147-279
Cow position: chrX:17524377-17524245 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 99

Conread position: 147-279
Cow position: chrX:19018824-19018692 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 147-279
Cow position: chrX:31744998-31744865 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 147-279
Cow position: chrX:38301816-38301948 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 148-279
Cow position: chrX:4559747-4559872 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 148-279
Cow position: chrX:35285181-35285312 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 148-279
Cow position: chrX:39180225-39180095 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 148-332
Cow position: chrX:38722129-38722317 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 148-348
Cow position: chrX:25459726-25459518 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 93, 58

Conread position: 150-279
Cow position: chrX:29501871-29501745 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 30

Conread position: 151-345
Cow position: chrX:46700836-46700637 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 126, 44

Conread position: 153-279
Cow position: chrX:753165-753295 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 154-278
Cow position: chrX:20957252-20957376 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 154-284
Cow position: chrX:23266429-23266559 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 154-348
Cow position: chrX:4466981-4467187 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 143, 0

Conread position: 156-279
Cow position: chrX:20583682-20583805 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 158-279
Cow position: chrX:28098344-28098465 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 159-279
Cow position: chrX:27667444-27667564 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 159-279
Cow position: chrX:32877356-32877236 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 159-279
Cow position: chrX:41810149-41810029 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 159-284
Cow position: chrX:18637508-18637636 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 164-279
Cow position: chrX:37062561-37062445 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 168-277
Cow position: chrX:40648924-40649032 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 22

Conread position: 171-278
Cow position: chrX:23860963-23860856 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 171-279
Cow position: chrX:2314588-2314480 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 89

Conread position: 171-279
Cow position: chrX:4612851-4612744 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 171-279
Cow position: chrX:17908119-17908011 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 171-295
Cow position: chrX:2551122-2551248 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 172-279
Cow position: chrX:48822310-48822203 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 172-352
Cow position: chrX:27666241-27666065 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 25

Conread position: 176-279
Cow position: chrX:23574691-23574792 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 182-278
Cow position: chrX:46068717-46068621 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 186-279
Cow position: chrX:30831287-30831194 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 335-521
Cow position: chrX:18799228-18799041 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 75

Conread position: 343-528
Cow position: chrX:19657038-19656858 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 343-530
Cow position: chrX:20654719-20654902 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 110, 16

Show alignments to all cow chromosomes.