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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10121H06.5
        

               
Conread position:
               
297-460
               

               
Cow position:
               
chr27:26238852-26239015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
297-461
               

               
Cow position:
               
chr27:15003151-15002987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 85
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr27:426796-426961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
297-467
               

               
Cow position:
               
chr27:17397625-17397457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
297-481
               

               
Cow position:
               
chr27:19387845-19388027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
297-481
               

               
Cow position:
               
chr27:21669287-21669106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
297-481
               

               
Cow position:
               
chr27:23560203-23560017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
298-460
               

               
Cow position:
               
chr27:4672842-4673006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
299-456
               

               
Cow position:
               
chr27:30489581-30489424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
299-465
               

               
Cow position:
               
chr27:19508844-19509008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
309-481
               

               
Cow position:
               
chr27:22171140-22171313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
313-461
               

               
Cow position:
               
chr27:7412236-7412384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
340-486
               

               
Cow position:
               
chr27:16625770-16625916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
455-606
               

               
Cow position:
               
chr27:7748464-7748621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
463-672
               

               
Cow position:
               
chr27:26644791-26644579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 154
               

               
Conread position:
               
466-610
               

               
Cow position:
               
chr27:5106646-5106796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
466-665
               

               
Cow position:
               
chr27:1354299-1354100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 141
               

               
Conread position:
               
466-672
               

               
Cow position:
               
chr27:26545224-26545430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
467-665
               

               
Cow position:
               
chr27:23074657-23074454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
470-660
               

               
Cow position:
               
chr27:12282158-12282348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
470-667
               

               
Cow position:
               
chr27:8427330-8427528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
470-670
               

               
Cow position:
               
chr27:5853218-5853419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr27:13198600-13198397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
471-645
               

               
Cow position:
               
chr27:6074828-6074650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 148
               

               
Conread position:
               
471-672
               

               
Cow position:
               
chr27:1081701-1081502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 123
               

               
Conread position:
               
471-672
               

               
Cow position:
               
chr27:8959545-8959342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 146
               

               
Conread position:
               
471-672
               

               
Cow position:
               
chr27:10324458-10324260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
471-672
               

               
Cow position:
               
chr27:21350319-21350520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
471-672
               

               
Cow position:
               
chr27:27291865-27292068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
475-602
               

               
Cow position:
               
chr27:23864113-23863982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
475-659
               

               
Cow position:
               
chr27:19388713-19388528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
475-660
               

               
Cow position:
               
chr27:31268691-31268878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
475-670
               

               
Cow position:
               
chr27:17923386-17923581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
475-672
               

               
Cow position:
               
chr27:537147-536953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
475-672
               

               
Cow position:
               
chr27:6019031-6019229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
475-672
               

               
Cow position:
               
chr27:11470010-11470205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
478-665
               

               
Cow position:
               
chr27:5990571-5990384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
478-672
               

               
Cow position:
               
chr27:13182811-13182614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
478-672
               

               
Cow position:
               
chr27:23454454-23454647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
480-620
               

               
Cow position:
               
chr27:27501669-27501809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
480-668
               

               
Cow position:
               
chr27:4979067-4979252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
480-672
               

               
Cow position:
               
chr27:526392-526585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
480-672
               

               
Cow position:
               
chr27:16076227-16076035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
481-584
               

               
Cow position:
               
chr27:723837-723944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
481-612
               

               
Cow position:
               
chr27:5983548-5983414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
481-622
               

               
Cow position:
               
chr27:18970213-18970356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
481-649
               

               
Cow position:
               
chr27:25472253-25472083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
481-670
               

               
Cow position:
               
chr27:30777237-30777048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:165438-165246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:523502-523696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:724026-724219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:791564-791371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:1481375-1481568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:1521156-1521354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:2001327-2001519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:3649963-3650156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:8187314-8187507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:8743614-8743428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:10579425-10579618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:11095327-11095134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:11651578-11651771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:12006630-12006823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:12147374-12147567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:14297689-14297880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:15100123-15100314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:15272592-15272402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:16030915-16030723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:16045211-16045405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:16260293-16260478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:16787518-16787331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:20001334-20001141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:24260344-24260161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:26551903-26551712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:27527519-27527711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:29035900-29035707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:29374424-29374231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr27:29446623-29446430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
482-671
               

               
Cow position:
               
chr27:13409478-13409670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
485-607
               

               
Cow position:
               
chr27:16110640-16110766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
485-622
               

               
Cow position:
               
chr27:23233476-23233617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
485-662
               

               
Cow position:
               
chr27:16551141-16550967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
485-663
               

               
Cow position:
               
chr27:1141186-1141363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
485-670
               

               
Cow position:
               
chr27:4665162-4664974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 177
               

               
Conread position:
               
485-670
               

               
Cow position:
               
chr27:13695822-13696009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
488-648
               

               
Cow position:
               
chr27:28145793-28145951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
488-663
               

               
Cow position:
               
chr27:22329980-22330157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 127
               

               
Conread position:
               
488-664
               

               
Cow position:
               
chr27:8942013-8942191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
488-668
               

               
Cow position:
               
chr27:25784275-25784093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
488-669
               

               
Cow position:
               
chr27:4509265-4509081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
488-669
               

               
Cow position:
               
chr27:11256198-11256014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
488-670
               

               
Cow position:
               
chr27:30446905-30446724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
488-670
               

               
Cow position:
               
chr27:30677597-30677416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 125
               

               
Conread position:
               
488-671
               

               
Cow position:
               
chr27:22797170-22796985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:3340437-3340251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:11434655-11434837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:13353795-13353980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:14380923-14381109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:15178895-15178709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:15312880-15312694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:19487495-19487309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:23893823-23894009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:28081620-28081802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
488-672
               

               
Cow position:
               
chr27:30177024-30176838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
489-606
               

               
Cow position:
               
chr27:15406112-15406230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
490-672
               

               
Cow position:
               
chr27:4389536-4389714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
495-668
               

               
Cow position:
               
chr27:22400448-22400278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
149, 74
               

               
Conread position:
               
495-672
               

               
Cow position:
               
chr27:10306606-10306777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
497-672
               

               
Cow position:
               
chr27:1884892-1884718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
498-609
               

               
Cow position:
               
chr27:27557300-27557411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
498-656
               

               
Cow position:
               
chr27:24055184-24055342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
498-660
               

               
Cow position:
               
chr27:5914438-5914600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
498-662
               

               
Cow position:
               
chr27:11490123-11490285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
498-670
               

               
Cow position:
               
chr27:25971175-25971004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
498-671
               

               
Cow position:
               
chr27:2332005-2332174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
498-671
               

               
Cow position:
               
chr27:15033389-15033218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
498-671
               

               
Cow position:
               
chr27:26330434-26330601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:1031052-1030879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:1293749-1293922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:2557492-2557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:3232036-3231863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:3653198-3653025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:4331237-4331064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:8201438-8201611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:8202498-8202326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:8262341-8262514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:8972947-8973120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:9333169-9333342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:9989377-9989206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:10383932-10384105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:11481433-11481606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:11606384-11606211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:12190776-12190949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:12549778-12549605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:12751033-12751204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:13422662-13422489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:13901625-13901798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:14669706-14669884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:15349141-15349310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:15871830-15871657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:17476713-17476548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:18740886-18741053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:19300064-19299891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:19523208-19523035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:19932055-19931883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:20810918-20811091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:20828034-20828207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:21451948-21452119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:24295758-24295585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
75, 112
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:25800709-25800536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:26849204-26849029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:26856542-26856715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:28907731-28907560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:30306764-30306591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
498-672
               

               
Cow position:
               
chr27:30921826-30921647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
499-659
               

               
Cow position:
               
chr27:21247072-21246912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
499-662
               

               
Cow position:
               
chr27:30697057-30697213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
499-668
               

               
Cow position:
               
chr27:5836324-5836492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
499-671
               

               
Cow position:
               
chr27:26598544-26598372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
499-672
               

               
Cow position:
               
chr27:344427-344256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
500-648
               

               
Cow position:
               
chr27:30036380-30036529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
44, 115
               

               
Conread position:
               
500-665
               

               
Cow position:
               
chr27:25112670-25112834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
500-672
               

               
Cow position:
               
chr27:28984269-28984441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
501-672
               

               
Cow position:
               
chr27:12277613-12277781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
502-670
               

               
Cow position:
               
chr27:16581669-16581504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
502-672
               

               
Cow position:
               
chr27:1145235-1145405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
502-672
               

               
Cow position:
               
chr27:4829015-4829181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
502-672
               

               
Cow position:
               
chr27:8291355-8291520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
502-672
               

               
Cow position:
               
chr27:27683369-27683538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
72, 111
               

               
Conread position:
               
503-672
               

               
Cow position:
               
chr27:1636288-1636455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
505-671
               

               
Cow position:
               
chr27:4768829-4768994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
508-631
               

               
Cow position:
               
chr27:4982872-4982994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 105
               

               
Conread position:
               
508-662
               

               
Cow position:
               
chr27:16331978-16331824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 104
               

               
Conread position:
               
508-672
               

               
Cow position:
               
chr27:15316154-15315984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
511-672
               

               
Cow position:
               
chr27:27063801-27063960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
511-672
               

               
Cow position:
               
chr27:28008411-28008571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
513-671
               

               
Cow position:
               
chr27:12006164-12006007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
517-672
               

               
Cow position:
               
chr27:4719252-4719405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
518-645
               

               
Cow position:
               
chr27:4824323-4824449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
520-672
               

               
Cow position:
               
chr27:1502017-1502168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
521-672
               

               
Cow position:
               
chr27:23079610-23079761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
524-672
               

               
Cow position:
               
chr27:3235258-3235406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
524-672
               

               
Cow position:
               
chr27:12098234-12098088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
524-672
               

               
Cow position:
               
chr27:13273081-13273227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
524-672
               

               
Cow position:
               
chr27:22559718-22559574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
529-669
               

               
Cow position:
               
chr27:6523750-6523611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
529-672
               

               
Cow position:
               
chr27:19326156-19326014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 85
               

               
Conread position:
               
534-672
               

               
Cow position:
               
chr27:5861838-5861701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
534-672
               

               
Cow position:
               
chr27:17403529-17403392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
534-672
               

               
Cow position:
               
chr27:29492931-29493066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
535-672
               

               
Cow position:
               
chr27:815996-815861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
539-672
               

               
Cow position:
               
chr27:30418288-30418155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
545-672
               

               
Cow position:
               
chr27:7958217-7958344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
550-672
               

               
Cow position:
               
chr27:4882224-4882104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
559-665
               

               
Cow position:
               
chr27:20757458-20757563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 55
               
Show alignments to all cow chromosomes.