Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
| Conread position: | 28-487 |
| Cow position: | |
| Alignm length: | 475 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 49-483 |
| Cow position: | |
| Alignm length: | 438 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 68-468 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 175 |
| Conread position: | 68-483 |
| Cow position: | |
| Alignm length: | 435 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 175 |
| Conread position: | 69-244 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-248 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 54, 110 |
| Conread position: | 69-255 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-280 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-289 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 174 |
| Conread position: | 69-360 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-469 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 173 |
| Conread position: | 69-481 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 120 |
| Conread position: | 69-483 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-483 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 71-473 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 72-239 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 72-280 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 72-306 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 216 |
| Conread position: | 72-363 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 171 |
| Conread position: | 72-365 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 72-431 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 201, 53 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 62 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 227 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 164 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 164 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 61 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 53 |
| Conread position: | 72-479 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 72-483 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 72-483 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 53 |
| Conread position: | 72-491 |
| Cow position: | |
| Alignm length: | 454 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 148 |
| Conread position: | 73-467 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-467 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 138 |
| Conread position: | 73-468 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 171 |
| Conread position: | 73-468 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 171 |
| Conread position: | 73-468 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-483 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 170 |
| Conread position: | 73-487 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 169 |
| Conread position: | 73-487 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-487 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-487 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 179 |
| Conread position: | 73-490 |
| Cow position: | |
| Alignm length: | 451 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 171 |
| Conread position: | 74-471 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 76-238 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 135 |
| Conread position: | 76-442 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 76-468 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 76-471 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 76-487 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 76-487 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 199 |
| Conread position: | 76-491 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 226 |
| Conread position: | 77-272 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 46, 167 |
| Conread position: | 77-471 |
| Cow position: | |
| Alignm length: | 412 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 166 |
| Conread position: | 77-471 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 154 |
| Conread position: | 77-471 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 143 |
| Conread position: | 77-489 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 78-483 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 78-489 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 134 |
| Conread position: | 88-474 |
| Cow position: | |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 15, 119 |
| Conread position: | 88-492 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 161 |
| Conread position: | 92-468 |
| Cow position: | |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 140, 148 |
| Conread position: | 93-483 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 150 |
| Conread position: | 97-480 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 97-487 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 194 |
| Conread position: | 99-471 |
| Cow position: | |
| Alignm length: | 391 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 103-491 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 107-492 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 114-471 |
| Cow position: | |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 118 |
| Conread position: | 114-491 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 205, 100 |
| Conread position: | 115-487 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 162, 106 |
| Conread position: | 119-384 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 202, 119 |
| Conread position: | 122-487 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 127-479 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 144, 110 |
| Conread position: | 144-487 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 96 |
| Conread position: | 152-308 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 169-483 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 102, 223 |
| Conread position: | 175-483 |
| Cow position: | |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 178-487 |
| Cow position: | |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 120, 16 |
| Conread position: | 188-483 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 89, 19 |
| Conread position: | 193-483 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 199-483 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 77, 9 |
| Conread position: | 200-483 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 88 |
| Conread position: | 204-483 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 206-484 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 214-471 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 107, 57 |
| Conread position: | 234-471 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 274-491 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 307-483 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 5 |
| Conread position: | 348-471 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 357-479 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.