Cow genome map

Conread name: Ss1.1-Ova1-OVRM10135F12.5

Conread position: 7-483
Cow position:
Alignm length: 499
Alignm identity: 323
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 82, 61

Conread position: 43-483
Cow position:
Alignm length: 451
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 201

Conread position: 46-480
Cow position:
Alignm length: 449
Alignm identity: 276
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 75

Conread position: 51-442
Cow position:
Alignm length: 412
Alignm identity: 280
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 10

Conread position: 57-491
Cow position:
Alignm length: 449
Alignm identity: 289
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 163

Conread position: 60-484
Cow position:
Alignm length: 430
Alignm identity: 274
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 76

Conread position: 69-238
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 69-291
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 174

Conread position: 69-355
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 174

Conread position: 69-360
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 176

Conread position: 69-483
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 433
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 69-487
Cow position:
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-487
Cow position:
Alignm length: 453
Alignm identity: 310
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 54, 181

Conread position: 69-491
Cow position:
Alignm length: 438
Alignm identity: 292
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 163, 121

Conread position: 70-471
Cow position:
Alignm length: 412
Alignm identity: 273
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 30

Conread position: 70-483
Cow position:
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 62

Conread position: 71-488
Cow position:
Alignm length: 442
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 172

Conread position: 72-208
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 72-254
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 171

Conread position: 72-265
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 171

Conread position: 72-287
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 140

Conread position: 72-360
Cow position:
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 96

Conread position: 72-360
Cow position:
Alignm length: 297
Alignm identity: 200
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 118

Conread position: 72-468
Cow position:
Alignm length: 412
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 94

Conread position: 72-468
Cow position:
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 170

Conread position: 72-469
Cow position:
Alignm length: 412
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 220

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 162

Conread position: 72-471
Cow position:
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 186

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 173

Conread position: 72-471
Cow position:
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 172

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 69

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 162

Conread position: 72-471
Cow position:
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 164

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 0

Conread position: 72-479
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-482
Cow position:
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-487
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 173

Conread position: 72-487
Cow position:
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 172

Conread position: 73-247
Cow position:
Alignm length: 181
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 140

Conread position: 73-271
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 73-293
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 171

Conread position: 73-361
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 179

Conread position: 73-467
Cow position:
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-468
Cow position:
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 73-468
Cow position:
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 174

Conread position: 73-468
Cow position:
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-468
Cow position:
Alignm length: 412
Alignm identity: 275
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 143

Conread position: 73-468
Cow position:
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 173

Conread position: 73-471
Cow position:
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 54

Conread position: 73-472
Cow position:
Alignm length: 415
Alignm identity: 285
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 46, 9

Conread position: 73-483
Cow position:
Alignm length: 437
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 247

Conread position: 73-483
Cow position:
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 171

Conread position: 73-483
Cow position:
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-487
Cow position:
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 66

Conread position: 73-487
Cow position:
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 71

Conread position: 73-491
Cow position:
Alignm length: 456
Alignm identity: 319
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 52, 140

Conread position: 75-487
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 146

Conread position: 76-378
Cow position:
Alignm length: 316
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 167

Conread position: 76-468
Cow position:
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 76-468
Cow position:
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 84

Conread position: 76-470
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 76-482
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 165

Conread position: 76-483
Cow position:
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 167

Conread position: 76-489
Cow position:
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 76-491
Cow position:
Alignm length: 442
Alignm identity: 298
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 35

Conread position: 77-437
Cow position:
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 157

Conread position: 77-471
Cow position:
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 133

Conread position: 77-471
Cow position:
Alignm length: 407
Alignm identity: 262
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 169

Conread position: 77-471
Cow position:
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 78-319
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 131

Conread position: 80-281
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 92

Conread position: 82-491
Cow position:
Alignm length: 417
Alignm identity: 273
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 97

Conread position: 85-355
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 93

Conread position: 88-463
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 53

Conread position: 92-471
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 204

Conread position: 92-491
Cow position:
Alignm length: 413
Alignm identity: 283
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 20, 155

Conread position: 94-487
Cow position:
Alignm length: 412
Alignm identity: 257
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 101

Conread position: 97-483
Cow position:
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 311

Conread position: 103-346
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 102

Conread position: 114-384
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 62

Conread position: 115-385
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 125

Conread position: 116-360
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 124

Conread position: 122-450
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 192, 101

Conread position: 133-471
Cow position:
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 108

Conread position: 133-483
Cow position:
Alignm length: 359
Alignm identity: 242
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 144, 77

Conread position: 147-471
Cow position:
Alignm length: 349
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 11

Conread position: 159-487
Cow position:
Alignm length: 350
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 163

Conread position: 174-490
Cow position:
Alignm length: 343
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 147, 122

Conread position: 178-487
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 176, 0

Conread position: 178-489
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 111

Conread position: 178-491
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 62

Conread position: 208-483
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 33

Conread position: 225-483
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 71

Conread position: 228-483
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 93, 68

Conread position: 233-470
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 9

Conread position: 234-468
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 95

Conread position: 234-471
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 6

Conread position: 248-479
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 49

Conread position: 249-491
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 38

Conread position: 250-491
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 46

Conread position: 253-471
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 41

Conread position: 260-470
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 9

Conread position: 260-470
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 9

Conread position: 275-486
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 20

Conread position: 295-491
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 35

Conread position: 342-487
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 349-483
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 29

Conread position: 354-489
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.