Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
Conread position: | 31-471 |
Cow position: | chr13:35757825-35758289 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 49-483 |
Cow position: | chr13:5625436-5624967 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 12 |
Conread position: | 61-466 |
Cow position: | chr13:44653230-44652816 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 263 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 140, 215 |
Conread position: | 69-269 |
Cow position: | chr13:30238829-30239030 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 158 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 54, 14 |
Conread position: | 69-279 |
Cow position: | chr13:58118319-58118107 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 54, 206 |
Conread position: | 69-360 |
Cow position: | chr13:52646285-52645989 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 208 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 54, 174 |
Conread position: | 69-423 |
Cow position: | chr13:60700076-60699707 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 252 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 57, 229 |
Conread position: | 69-426 |
Cow position: | chr13:34424352-34424724 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 258 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 54, 174 |
Conread position: | 69-465 |
Cow position: | chr13:34049329-34049741 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 279 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 48, 116 |
Conread position: | 69-471 |
Cow position: | chr13:31556139-31555734 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 272 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 104, 56 |
Conread position: | 69-483 |
Cow position: | chr13:17309063-17309489 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 174 |
Conread position: | 69-483 |
Cow position: | chr13:60466919-60467347 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 18 |
Conread position: | 69-487 |
Cow position: | chr13:11798120-11797695 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 154 |
Conread position: | 72-261 |
Cow position: | chr13:34910272-34910083 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 141 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 49, 126 |
Conread position: | 72-360 |
Cow position: | chr13:3056542-3056249 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 202 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 51, 264 |
Conread position: | 72-360 |
Cow position: | chr13:28670669-28670378 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 194 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 46, 171 |
Conread position: | 72-382 |
Cow position: | chr13:19441162-19441474 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 212 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 27, 135 |
Conread position: | 72-389 |
Cow position: | chr13:20541450-20541134 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 240 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 43, 16 |
Conread position: | 72-468 |
Cow position: | chr13:9045371-9045770 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 48 |
Conread position: | 72-468 |
Cow position: | chr13:34041740-34041334 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 140 |
Conread position: | 72-470 |
Cow position: | chr13:12633162-12633551 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 273 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 49, 101 |
Conread position: | 72-471 |
Cow position: | chr13:1592558-1592147 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 262 |
Conread position: | 72-471 |
Cow position: | chr13:3653726-3653312 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 172 |
Conread position: | 72-471 |
Cow position: | chr13:4484391-4484796 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 61 |
Conread position: | 72-471 |
Cow position: | chr13:6667539-6667125 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 81 |
Conread position: | 72-471 |
Cow position: | chr13:15519913-15519514 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 173 |
Conread position: | 72-471 |
Cow position: | chr13:15543135-15543548 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 161 |
Conread position: | 72-471 |
Cow position: | chr13:15923786-15923375 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 172 |
Conread position: | 72-471 |
Cow position: | chr13:17331169-17330756 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 279 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 51, 98 |
Conread position: | 72-471 |
Cow position: | chr13:30303877-30304301 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 164 |
Conread position: | 72-471 |
Cow position: | chr13:31611713-31611303 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 174 |
Conread position: | 72-471 |
Cow position: | chr13:31730281-31729888 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 273 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 55, 157 |
Conread position: | 72-478 |
Cow position: | chr13:13900462-13900882 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 162 |
Conread position: | 72-483 |
Cow position: | chr13:16254790-16254365 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 41 |
Conread position: | 72-483 |
Cow position: | chr13:21696845-21697272 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 171 |
Conread position: | 72-491 |
Cow position: | chr13:57024292-57024721 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 284 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 50, 136 |
Conread position: | 73-248 |
Cow position: | chr13:677612-677789 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 51, 36 |
Conread position: | 73-259 |
Cow position: | chr13:30244086-30243898 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 145 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 50, 127 |
Conread position: | 73-465 |
Cow position: | chr13:47229410-47228999 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 73-468 |
Cow position: | chr13:21839605-21839190 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 174 |
Conread position: | 73-471 |
Cow position: | chr13:2388220-2387801 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 73-483 |
Cow position: | chr13:42218330-42217892 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 304 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 50, 185 |
Conread position: | 73-483 |
Cow position: | chr13:49974271-49974684 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 254 |
Conread position: | 74-279 |
Cow position: | chr13:34030006-34030214 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 26, 8 |
Conread position: | 74-492 |
Cow position: | chr13:15450531-15450091 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 154 |
Conread position: | 75-487 |
Cow position: | chr13:43982499-43982079 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 5 |
Conread position: | 76-471 |
Cow position: | chr13:14178240-14177836 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 279 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 46, 143 |
Conread position: | 76-483 |
Cow position: | chr13:30278217-30278633 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 270 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 49, 102 |
Conread position: | 76-490 |
Cow position: | chr13:50110049-50110483 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 135 |
Conread position: | 77-278 |
Cow position: | chr13:33335717-33335511 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 160 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 50, 157 |
Conread position: | 77-424 |
Cow position: | chr13:26844627-26844969 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 132 |
Conread position: | 77-468 |
Cow position: | chr13:32737225-32736821 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 222 |
Conread position: | 77-487 |
Cow position: | chr13:32545979-32546418 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 167 |
Conread position: | 78-485 |
Cow position: | chr13:34324960-34324533 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 226 |
Conread position: | 79-489 |
Cow position: | chr13:25692285-25692702 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 283 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 42, 132 |
Conread position: | 80-423 |
Cow position: | chr13:30654779-30654420 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 166 |
Conread position: | 88-468 |
Cow position: | chr13:32984741-32984339 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 155 |
Conread position: | 89-453 |
Cow position: | chr13:34154150-34153769 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 154 |
Conread position: | 89-484 |
Cow position: | chr13:34938075-34938469 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 154 |
Conread position: | 91-487 |
Cow position: | chr13:5628195-5627809 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 263 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 151, 58 |
Conread position: | 107-471 |
Cow position: | chr13:4942017-4942390 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 49 |
Conread position: | 133-297 |
Cow position: | chr13:35031781-35031945 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 130 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 99, 107 |
Conread position: | 133-468 |
Cow position: | chr13:31733232-31732886 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 107 |
Conread position: | 147-471 |
Cow position: | chr13:14402426-14402090 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 149 |
Conread position: | 147-488 |
Cow position: | chr13:42202569-42202217 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 233 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 26, 11 |
Conread position: | 150-491 |
Cow position: | chr13:43590006-43590362 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 146 |
Conread position: | 156-472 |
Cow position: | chr13:57823988-57823681 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 213 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 7, 17 |
Conread position: | 177-468 |
Cow position: | chr13:13325622-13325932 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 221 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 55, 66 |
Conread position: | 193-471 |
Cow position: | chr13:31506352-31506623 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 190 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 121, 12 |
Conread position: | 239-471 |
Cow position: | chr13:23002248-23002001 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 49, 77 |
Conread position: | 287-483 |
Cow position: | chr13:48358455-48358661 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 149 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 34, 9 |
Conread position: | 343-489 |
Cow position: | chr13:50661180-50661327 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 44, 14 |
Show alignments to all cow chromosomes.