Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
| Conread position: | 31-471 |
| Cow position: | |
| Alignm length: | 469 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 49-483 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 61-466 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 140, 215 |
| Conread position: | 69-269 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 69-279 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 54, 206 |
| Conread position: | 69-360 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-423 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 229 |
| Conread position: | 69-426 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-465 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 69-471 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 56 |
| Conread position: | 69-483 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-483 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 69-487 |
| Cow position: | |
| Alignm length: | 437 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 72-261 |
| Cow position: | |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 72-360 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 264 |
| Conread position: | 72-360 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 171 |
| Conread position: | 72-382 |
| Cow position: | |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 27, 135 |
| Conread position: | 72-389 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 48 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 140 |
| Conread position: | 72-470 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 262 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 172 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 173 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 51, 98 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 164 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 174 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 273 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 157 |
| Conread position: | 72-478 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 72-483 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 72-483 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 171 |
| Conread position: | 72-491 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 50, 136 |
| Conread position: | 73-248 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 73-259 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 73-465 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-468 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 174 |
| Conread position: | 73-471 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-483 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 304 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 73-483 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 254 |
| Conread position: | 74-279 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 74-492 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 154 |
| Conread position: | 75-487 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 5 |
| Conread position: | 76-471 |
| Cow position: | |
| Alignm length: | 410 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 76-483 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 102 |
| Conread position: | 76-490 |
| Cow position: | |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 77-278 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 157 |
| Conread position: | 77-424 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 132 |
| Conread position: | 77-468 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 222 |
| Conread position: | 77-487 |
| Cow position: | |
| Alignm length: | 441 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 167 |
| Conread position: | 78-485 |
| Cow position: | |
| Alignm length: | 429 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 226 |
| Conread position: | 79-489 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 132 |
| Conread position: | 80-423 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 166 |
| Conread position: | 88-468 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 155 |
| Conread position: | 89-453 |
| Cow position: | |
| Alignm length: | 386 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 89-484 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 154 |
| Conread position: | 91-487 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 151, 58 |
| Conread position: | 107-471 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 49 |
| Conread position: | 133-297 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 133-468 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 147-471 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 149 |
| Conread position: | 147-488 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 150-491 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 146 |
| Conread position: | 156-472 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 177-468 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 55, 66 |
| Conread position: | 193-471 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 239-471 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 287-483 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 343-489 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 14 |
Show alignments to all cow chromosomes.