Cow genome map

Conread name: Ss1.1-Ova1-OVRM10135F12.5

Conread position: 61-471
Cow position:
Alignm length: 446
Alignm identity: 309
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 171, 39

Conread position: 66-289
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 179

Conread position: 69-242
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 54, 154

Conread position: 69-270
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 174

Conread position: 69-289
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 54, 174

Conread position: 69-328
Cow position:
Alignm length: 263
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 15

Conread position: 69-428
Cow position:
Alignm length: 379
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 112

Conread position: 69-471
Cow position:
Alignm length: 433
Alignm identity: 292
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 189

Conread position: 69-483
Cow position:
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 177

Conread position: 69-483
Cow position:
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-487
Cow position:
Alignm length: 435
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 143

Conread position: 69-487
Cow position:
Alignm length: 435
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 69-489
Cow position:
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 46

Conread position: 69-490
Cow position:
Alignm length: 429
Alignm identity: 279
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 139

Conread position: 70-310
Cow position:
Alignm length: 244
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 70-466
Cow position:
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 174

Conread position: 72-267
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 144

Conread position: 72-279
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 163, 167

Conread position: 72-288
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 49, 171

Conread position: 72-301
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 171

Conread position: 72-305
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 99

Conread position: 72-354
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 72-402
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 176

Conread position: 72-437
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 72-464
Cow position:
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 162

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 245

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 427
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 284

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 133

Conread position: 72-471
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 161

Conread position: 72-471
Cow position:
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 163

Conread position: 72-471
Cow position:
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 54

Conread position: 72-471
Cow position:
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 72-479
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 72-479
Cow position:
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 162

Conread position: 72-480
Cow position:
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-483
Cow position:
Alignm length: 420
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 98

Conread position: 72-483
Cow position:
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 172

Conread position: 72-483
Cow position:
Alignm length: 424
Alignm identity: 276
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 167, 53

Conread position: 72-487
Cow position:
Alignm length: 440
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 72

Conread position: 72-489
Cow position:
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 132

Conread position: 72-490
Cow position:
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 112

Conread position: 72-491
Cow position:
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 230

Conread position: 72-492
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 73-220
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 131

Conread position: 73-360
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 132, 48

Conread position: 73-439
Cow position:
Alignm length: 394
Alignm identity: 263
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 177

Conread position: 73-467
Cow position:
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 172

Conread position: 73-468
Cow position:
Alignm length: 421
Alignm identity: 287
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 172

Conread position: 73-468
Cow position:
Alignm length: 406
Alignm identity: 278
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 48, 25

Conread position: 73-468
Cow position:
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 175

Conread position: 73-471
Cow position:
Alignm length: 418
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 36

Conread position: 73-483
Cow position:
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 183

Conread position: 73-483
Cow position:
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-487
Cow position:
Alignm length: 435
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 170

Conread position: 73-491
Cow position:
Alignm length: 447
Alignm identity: 298
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 185

Conread position: 74-483
Cow position:
Alignm length: 444
Alignm identity: 304
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 49, 172

Conread position: 76-471
Cow position:
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 166

Conread position: 76-473
Cow position:
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 76-473
Cow position:
Alignm length: 408
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 159

Conread position: 76-488
Cow position:
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 137

Conread position: 76-491
Cow position:
Alignm length: 430
Alignm identity: 279
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 199

Conread position: 77-471
Cow position:
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 157

Conread position: 77-471
Cow position:
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 157

Conread position: 77-471
Cow position:
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 166

Conread position: 78-491
Cow position:
Alignm length: 433
Alignm identity: 290
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 147

Conread position: 79-308
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 45, 31

Conread position: 79-479
Cow position:
Alignm length: 429
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 47

Conread position: 80-465
Cow position:
Alignm length: 399
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 169

Conread position: 80-490
Cow position:
Alignm length: 427
Alignm identity: 269
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 163

Conread position: 81-489
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 162

Conread position: 82-423
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 62

Conread position: 82-471
Cow position:
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 160

Conread position: 82-483
Cow position:
Alignm length: 421
Alignm identity: 285
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 111

Conread position: 82-483
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 196

Conread position: 85-435
Cow position:
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 208

Conread position: 86-308
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 146, 91

Conread position: 86-316
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 47

Conread position: 88-487
Cow position:
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 155

Conread position: 90-483
Cow position:
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 200

Conread position: 94-483
Cow position:
Alignm length: 404
Alignm identity: 267
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 89

Conread position: 94-489
Cow position:
Alignm length: 403
Alignm identity: 278
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 15

Conread position: 100-386
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 34

Conread position: 106-468
Cow position:
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 119

Conread position: 109-469
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 131

Conread position: 114-487
Cow position:
Alignm length: 398
Alignm identity: 263
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 12

Conread position: 117-488
Cow position:
Alignm length: 385
Alignm identity: 255
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 160, 75

Conread position: 117-491
Cow position:
Alignm length: 389
Alignm identity: 253
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 118, 124

Conread position: 122-270
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 56

Conread position: 126-441
Cow position:
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 117

Conread position: 129-483
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 103, 111

Conread position: 133-491
Cow position:
Alignm length: 376
Alignm identity: 255
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 140, 104

Conread position: 134-464
Cow position:
Alignm length: 334
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 88

Conread position: 136-483
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 31

Conread position: 137-491
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 57

Conread position: 143-483
Cow position:
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 96

Conread position: 144-474
Cow position:
Alignm length: 342
Alignm identity: 224
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 46

Conread position: 146-465
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 131, 87

Conread position: 166-467
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 73, 67

Conread position: 167-483
Cow position:
Alignm length: 331
Alignm identity: 225
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 65, 41

Conread position: 178-483
Cow position:
Alignm length: 313
Alignm identity: 213
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 54, 62

Conread position: 181-384
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 61

Conread position: 182-468
Cow position:
Alignm length: 307
Alignm identity: 205
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 58

Conread position: 190-483
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 43

Conread position: 202-483
Cow position:
Alignm length: 301
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 30, 37

Conread position: 205-468
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 7, 39

Conread position: 220-483
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 242-491
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 31

Conread position: 250-491
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 31

Conread position: 277-487
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 19

Conread position: 335-468
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 349-471
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 15

Conread position: 355-483
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.