Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
Conread position: | 60-471 |
Cow position: | chr18:16721224-16720825 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 282 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 112 |
Conread position: | 69-278 |
Cow position: | chr18:33952675-33952462 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 54, 173 |
Conread position: | 69-308 |
Cow position: | chr18:4946961-4947199 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 176 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 43, 71 |
Conread position: | 69-468 |
Cow position: | chr18:11274201-11273798 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 142 |
Conread position: | 69-468 |
Cow position: | chr18:47742409-47742821 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 34 |
Conread position: | 69-489 |
Cow position: | chr18:19405657-19405235 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 271 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 128, 44 |
Conread position: | 69-489 |
Cow position: | chr18:54023229-54022790 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 174 |
Conread position: | 71-361 |
Cow position: | chr18:32768565-32768855 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 197 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 50, 141 |
Conread position: | 71-471 |
Cow position: | chr18:14131300-14131715 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 172 |
Conread position: | 72-254 |
Cow position: | chr18:25351664-25351849 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 46, 171 |
Conread position: | 72-271 |
Cow position: | chr18:33750921-33751120 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 153 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 57, 11 |
Conread position: | 72-308 |
Cow position: | chr18:54170627-54170385 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 171 |
Conread position: | 72-361 |
Cow position: | chr18:32653125-32653420 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 171 |
Conread position: | 72-431 |
Cow position: | chr18:36509247-36509624 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 165 |
Conread position: | 72-471 |
Cow position: | chr18:16175708-16175297 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 164 |
Conread position: | 72-471 |
Cow position: | chr18:23798557-23798968 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 171 |
Conread position: | 72-471 |
Cow position: | chr18:27837402-27836988 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 171 |
Conread position: | 72-471 |
Cow position: | chr18:28972976-28972566 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 164 |
Conread position: | 72-471 |
Cow position: | chr18:40479297-40479715 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 77 |
Conread position: | 72-471 |
Cow position: | chr18:41839900-41839496 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 180 |
Conread position: | 72-471 |
Cow position: | chr18:52651820-52652231 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 218 |
Conread position: | 72-479 |
Cow position: | chr18:14416893-14417309 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 162 |
Conread position: | 72-484 |
Cow position: | chr18:16869335-16869749 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 286 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 50, 102 |
Conread position: | 72-489 |
Cow position: | chr18:37506869-37507297 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 162 |
Conread position: | 73-226 |
Cow position: | chr18:51462180-51462024 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 115 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 73-468 |
Cow position: | chr18:16079576-16079989 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 73-483 |
Cow position: | chr18:51661250-51661675 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 74-481 |
Cow position: | chr18:40081496-40081080 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 272 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 13, 83 |
Conread position: | 75-467 |
Cow position: | chr18:51342596-51343003 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 168 |
Conread position: | 76-467 |
Cow position: | chr18:15856157-15856539 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 254 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 156, 135 |
Conread position: | 77-468 |
Cow position: | chr18:54005258-54004853 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 165 |
Conread position: | 77-471 |
Cow position: | chr18:16089054-16089441 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 274 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 50, 101 |
Conread position: | 77-471 |
Cow position: | chr18:51481800-51482191 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 77-483 |
Cow position: | chr18:19353272-19353698 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 166 |
Conread position: | 80-293 |
Cow position: | chr18:26245374-26245585 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 156 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 32, 56 |
Conread position: | 86-472 |
Cow position: | chr18:27988113-27988506 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 291 |
Conread position: | 89-279 |
Cow position: | chr18:33269746-33269939 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 153 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 33, 154 |
Conread position: | 91-466 |
Cow position: | chr18:25364132-25364521 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 259 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 26, 154 |
Conread position: | 94-483 |
Cow position: | chr18:29073925-29074320 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 261 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 23, 96 |
Conread position: | 97-471 |
Cow position: | chr18:36255975-36255603 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 253 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 25, 151 |
Conread position: | 109-487 |
Cow position: | chr18:18842653-18842278 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 247 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 59, 10 |
Conread position: | 114-474 |
Cow position: | chr18:51275091-51274722 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 258 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 207, 141 |
Conread position: | 132-483 |
Cow position: | chr18:54271467-54271811 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 251 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 165, 12 |
Conread position: | 133-289 |
Cow position: | chr18:45946875-45946718 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 142, 0 |
Conread position: | 133-465 |
Cow position: | chr18:15850408-15850734 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 224 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 140, 53 |
Conread position: | 133-491 |
Cow position: | chr18:29237876-29238242 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 163 |
Conread position: | 134-456 |
Cow position: | chr18:15821846-15821523 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 220 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 98, 105 |
Conread position: | 134-482 |
Cow position: | chr18:38343297-38342959 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 249 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 30, 64 |
Conread position: | 154-484 |
Cow position: | chr18:56013569-56013912 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 243 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 128, 12 |
Conread position: | 199-491 |
Cow position: | chr18:46867857-46867561 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 202 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 78, 41 |
Conread position: | 233-468 |
Cow position: | chr18:51461980-51461734 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 172 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 58, 9 |
Conread position: | 239-483 |
Cow position: | chr18:18528172-18528431 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 178 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 82, 34 |
Conread position: | 252-482 |
Cow position: | chr18:25352347-25352590 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 182 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 29, 42 |
Conread position: | 258-487 |
Cow position: | chr18:33751360-33751596 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 174 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 30, 61 |
Conread position: | 269-489 |
Cow position: | chr18:33270060-33270283 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 15, 67 |
Conread position: | 287-468 |
Cow position: | chr18:29865485-29865292 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 13, 26 |
Conread position: | 350-489 |
Cow position: | chr18:54170311-54170170 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 37, 21 |
Conread position: | 354-486 |
Cow position: | chr18:37663548-37663682 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 101 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.