Cow genome map

Conread name: Ss1.1-Ova1-OVRM10135F12.5

Conread position: 60-471
Cow position: chr18:16721224-16720825 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 282
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 112

Conread position: 69-278
Cow position: chr18:33952675-33952462 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 173

Conread position: 69-308
Cow position: chr18:4946961-4947199 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 71

Conread position: 69-468
Cow position: chr18:11274201-11273798 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 69-468
Cow position: chr18:47742409-47742821 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 34

Conread position: 69-489
Cow position: chr18:19405657-19405235 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 271
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 44

Conread position: 69-489
Cow position: chr18:54023229-54022790 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 174

Conread position: 71-361
Cow position: chr18:32768565-32768855 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 141

Conread position: 71-471
Cow position: chr18:14131300-14131715 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 172

Conread position: 72-254
Cow position: chr18:25351664-25351849 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 171

Conread position: 72-271
Cow position: chr18:33750921-33751120 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 11

Conread position: 72-308
Cow position: chr18:54170627-54170385 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 171

Conread position: 72-361
Cow position: chr18:32653125-32653420 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-431
Cow position: chr18:36509247-36509624 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 165

Conread position: 72-471
Cow position: chr18:16175708-16175297 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 164

Conread position: 72-471
Cow position: chr18:23798557-23798968 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position: chr18:27837402-27836988 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 171

Conread position: 72-471
Cow position: chr18:28972976-28972566 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 164

Conread position: 72-471
Cow position: chr18:40479297-40479715 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 77

Conread position: 72-471
Cow position: chr18:41839900-41839496 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 180

Conread position: 72-471
Cow position: chr18:52651820-52652231 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 218

Conread position: 72-479
Cow position: chr18:14416893-14417309 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-484
Cow position: chr18:16869335-16869749 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 286
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 50, 102

Conread position: 72-489
Cow position: chr18:37506869-37507297 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 73-226
Cow position: chr18:51462180-51462024 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 73-468
Cow position: chr18:16079576-16079989 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-483
Cow position: chr18:51661250-51661675 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 74-481
Cow position: chr18:40081496-40081080 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 272
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 83

Conread position: 75-467
Cow position: chr18:51342596-51343003 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 168

Conread position: 76-467
Cow position: chr18:15856157-15856539 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 156, 135

Conread position: 77-468
Cow position: chr18:54005258-54004853 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 165

Conread position: 77-471
Cow position: chr18:16089054-16089441 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 101

Conread position: 77-471
Cow position: chr18:51481800-51482191 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 77-483
Cow position: chr18:19353272-19353698 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 166

Conread position: 80-293
Cow position: chr18:26245374-26245585 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 56

Conread position: 86-472
Cow position: chr18:27988113-27988506 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 291

Conread position: 89-279
Cow position: chr18:33269746-33269939 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 154

Conread position: 91-466
Cow position: chr18:25364132-25364521 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 259
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 26, 154

Conread position: 94-483
Cow position: chr18:29073925-29074320 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 96

Conread position: 97-471
Cow position: chr18:36255975-36255603 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 151

Conread position: 109-487
Cow position: chr18:18842653-18842278 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 247
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 10

Conread position: 114-474
Cow position: chr18:51275091-51274722 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 207, 141

Conread position: 132-483
Cow position: chr18:54271467-54271811 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 165, 12

Conread position: 133-289
Cow position: chr18:45946875-45946718 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 142, 0

Conread position: 133-465
Cow position: chr18:15850408-15850734 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 53

Conread position: 133-491
Cow position: chr18:29237876-29238242 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 163

Conread position: 134-456
Cow position: chr18:15821846-15821523 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 98, 105

Conread position: 134-482
Cow position: chr18:38343297-38342959 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 30, 64

Conread position: 154-484
Cow position: chr18:56013569-56013912 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 128, 12

Conread position: 199-491
Cow position: chr18:46867857-46867561 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 41

Conread position: 233-468
Cow position: chr18:51461980-51461734 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 9

Conread position: 239-483
Cow position: chr18:18528172-18528431 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 34

Conread position: 252-482
Cow position: chr18:25352347-25352590 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 42

Conread position: 258-487
Cow position: chr18:33751360-33751596 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 61

Conread position: 269-489
Cow position: chr18:33270060-33270283 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 67

Conread position: 287-468
Cow position: chr18:29865485-29865292 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 26

Conread position: 350-489
Cow position: chr18:54170311-54170170 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 21

Conread position: 354-486
Cow position: chr18:37663548-37663682 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.