Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
Conread position: | 35-481 |
Cow position: | chr21:16693180-16693629 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 283 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 25, 33 |
Conread position: | 69-280 |
Cow position: | chr21:46916658-46916873 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 164 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 54, 174 |
Conread position: | 69-316 |
Cow position: | chr21:11452674-11452423 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 152 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 69-348 |
Cow position: | chr21:13313742-13314022 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 103 |
Conread position: | 69-360 |
Cow position: | chr21:37935807-37936103 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 212 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 54, 174 |
Conread position: | 69-468 |
Cow position: | chr21:2511824-2512242 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 178 |
Conread position: | 69-468 |
Cow position: | chr21:21519614-21519995 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 269 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 46, 101 |
Conread position: | 69-468 |
Cow position: | chr21:39426046-39426456 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 19 |
Conread position: | 69-471 |
Cow position: | chr21:12055021-12054619 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 139 |
Conread position: | 69-480 |
Cow position: | chr21:37149016-37149442 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 278 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 53, 179 |
Conread position: | 71-421 |
Cow position: | chr21:21943778-21943416 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 231 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 47, 9 |
Conread position: | 71-471 |
Cow position: | chr21:27069982-27069566 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 33 |
Conread position: | 71-491 |
Cow position: | chr21:360628-361095 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 72-279 |
Cow position: | chr21:21222982-21222770 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 146 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 49, 118 |
Conread position: | 72-279 |
Cow position: | chr21:37719034-37718823 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 166 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 49, 159 |
Conread position: | 72-303 |
Cow position: | chr21:10567662-10567884 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 176 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 167, 53 |
Conread position: | 72-319 |
Cow position: | chr21:6624758-6625006 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 187 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 55, 107 |
Conread position: | 72-388 |
Cow position: | chr21:37046608-37046928 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 224 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 51, 105 |
Conread position: | 72-468 |
Cow position: | chr21:5840278-5839868 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 170 |
Conread position: | 72-469 |
Cow position: | chr21:1287232-1286810 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 257 |
Conread position: | 72-471 |
Cow position: | chr21:146915-147324 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 162 |
Conread position: | 72-471 |
Cow position: | chr21:1192746-1193153 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 60 |
Conread position: | 72-471 |
Cow position: | chr21:2711952-2712334 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 16 |
Conread position: | 72-471 |
Cow position: | chr21:26402502-26402090 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 172 |
Conread position: | 72-471 |
Cow position: | chr21:28985103-28985504 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 271 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 50, 172 |
Conread position: | 72-471 |
Cow position: | chr21:31515342-31514918 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 165 |
Conread position: | 72-471 |
Cow position: | chr21:33253162-33253580 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 132 |
Conread position: | 72-471 |
Cow position: | chr21:35144743-35145157 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 162 |
Conread position: | 72-471 |
Cow position: | chr21:40270686-40270275 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 61 |
Conread position: | 72-473 |
Cow position: | chr21:20743597-20743211 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 278 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 26, 136 |
Conread position: | 72-491 |
Cow position: | chr21:9892877-9893312 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 216 |
Conread position: | 73-468 |
Cow position: | chr21:11506584-11507007 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 294 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 50, 177 |
Conread position: | 73-489 |
Cow position: | chr21:28256420-28256842 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 156 |
Conread position: | 73-492 |
Cow position: | chr21:34001687-34001249 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 293 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 50, 148 |
Conread position: | 76-420 |
Cow position: | chr21:25782630-25782985 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 234 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 176, 37 |
Conread position: | 76-468 |
Cow position: | chr21:37372227-37372633 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 167 |
Conread position: | 76-483 |
Cow position: | chr21:18817564-18817137 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 169 |
Conread position: | 76-483 |
Cow position: | chr21:34823223-34822801 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 33 |
Conread position: | 76-488 |
Cow position: | chr21:4184894-4185336 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 415 |
Conread position: | 77-244 |
Cow position: | chr21:27566634-27566799 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 77-318 |
Cow position: | chr21:5018104-5018347 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 179 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 77-465 |
Cow position: | chr21:2882747-2882346 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 167 |
Conread position: | 77-479 |
Cow position: | chr21:3779759-3780178 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 22 |
Conread position: | 77-482 |
Cow position: | chr21:10851071-10851494 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 165 |
Conread position: | 79-489 |
Cow position: | chr21:2417209-2417631 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 174 |
Conread position: | 80-272 |
Cow position: | chr21:26637209-26637010 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 35, 154 |
Conread position: | 81-483 |
Cow position: | chr21:21915681-21916099 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 45 |
Conread position: | 82-266 |
Cow position: | chr21:4077829-4078014 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 39, 105 |
Conread position: | 82-484 |
Cow position: | chr21:218047-218437 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 281 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 39, 90 |
Conread position: | 82-487 |
Cow position: | chr21:42914361-42914780 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 161 |
Conread position: | 90-492 |
Cow position: | chr21:30081-30492 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 153 |
Conread position: | 92-458 |
Cow position: | chr21:2540071-2539717 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 104 |
Conread position: | 95-483 |
Cow position: | chr21:467877-468267 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 134 |
Conread position: | 96-270 |
Cow position: | chr21:28613105-28613281 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 98-481 |
Cow position: | chr21:4588982-4588568 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 293 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 16, 117 |
Conread position: | 117-360 |
Cow position: | chr21:48292483-48292729 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 169 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 160, 106 |
Conread position: | 117-483 |
Cow position: | chr21:26835924-26836307 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 123 |
Conread position: | 118-441 |
Cow position: | chr21:36979878-36979548 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 222 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 57, 64 |
Conread position: | 121-471 |
Cow position: | chr21:30598436-30598082 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 11 |
Conread position: | 123-492 |
Cow position: | chr21:45782521-45782903 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 117 |
Conread position: | 127-483 |
Cow position: | chr21:45786389-45786022 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 247 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 17, 28 |
Conread position: | 132-471 |
Cow position: | chr21:27284501-27284866 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 108 |
Conread position: | 133-481 |
Cow position: | chr21:3169446-3169798 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 230 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 165, 188 |
Conread position: | 137-483 |
Cow position: | chr21:2673953-2673591 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 102 |
Conread position: | 142-407 |
Cow position: | chr21:29625685-29625418 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 189 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 90, 98 |
Conread position: | 143-483 |
Cow position: | chr21:27036341-27035988 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 245 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 89, 97 |
Conread position: | 160-483 |
Cow position: | chr21:47942024-47942358 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 238 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 72, 80 |
Conread position: | 188-466 |
Cow position: | chr21:28736278-28736568 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 203 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 52, 84 |
Conread position: | 190-483 |
Cow position: | chr21:40683339-40683034 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 207 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 42, 51 |
Conread position: | 197-468 |
Cow position: | chr21:47646455-47646724 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 184 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 28, 55 |
Conread position: | 205-471 |
Cow position: | chr21:11452424-11452154 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 183 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 27, 36 |
Conread position: | 208-489 |
Cow position: | chr21:26849896-26849601 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 201 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 91, 17 |
Conread position: | 224-483 |
Cow position: | chr21:7063653-7063913 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 176 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 19 |
Conread position: | 239-444 |
Cow position: | chr21:30562639-30562849 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 73, 57 |
Conread position: | 288-483 |
Cow position: | chr21:4077988-4078187 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 156 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 33, 8 |
Conread position: | 354-471 |
Cow position: | chr21:10567982-10568101 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.