Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
Conread position: | 20-471 |
Cow position: | chr24:17371123-17370661 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 307 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 57, 153 |
Conread position: | 56-385 |
Cow position: | chr24:16097440-16097770 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 219 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 67, 25 |
Conread position: | 61-469 |
Cow position: | chr24:40655939-40656354 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 271 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 60, 210 |
Conread position: | 69-248 |
Cow position: | chr24:12484421-12484238 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 139 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 69-468 |
Cow position: | chr24:6328135-6327720 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 174 |
Conread position: | 69-468 |
Cow position: | chr24:12699920-12699509 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 183 |
Conread position: | 69-471 |
Cow position: | chr24:12334862-12334445 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 164 |
Conread position: | 69-471 |
Cow position: | chr24:23504968-23504551 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 174 |
Conread position: | 69-483 |
Cow position: | chr24:9187837-9187418 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 175 |
Conread position: | 69-483 |
Cow position: | chr24:29305424-29304989 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 290 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 69-483 |
Cow position: | chr24:44018430-44018832 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 278 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 54, 75 |
Conread position: | 69-487 |
Cow position: | chr24:14871417-14870995 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 115 |
Conread position: | 69-488 |
Cow position: | chr24:9091165-9090722 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 42 |
Conread position: | 72-230 |
Cow position: | chr24:40193412-40193573 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 72-269 |
Cow position: | chr24:29183050-29183250 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 49, 170 |
Conread position: | 72-297 |
Cow position: | chr24:11866349-11866123 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 167 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 54, 171 |
Conread position: | 72-430 |
Cow position: | chr24:6059799-6060169 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 249 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 103, 53 |
Conread position: | 72-468 |
Cow position: | chr24:147710-147301 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 162 |
Conread position: | 72-468 |
Cow position: | chr24:4414632-4414225 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 100 |
Conread position: | 72-468 |
Cow position: | chr24:12129168-12128754 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 154 |
Conread position: | 72-471 |
Cow position: | chr24:6406929-6407346 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 171 |
Conread position: | 72-471 |
Cow position: | chr24:7090071-7089656 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 298 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 26, 10 |
Conread position: | 72-471 |
Cow position: | chr24:9544964-9545366 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 101 |
Conread position: | 72-471 |
Cow position: | chr24:12087106-12087520 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 60 |
Conread position: | 72-471 |
Cow position: | chr24:19834291-19834708 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 174 |
Conread position: | 72-471 |
Cow position: | chr24:22971990-22972404 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 162 |
Conread position: | 72-471 |
Cow position: | chr24:29188190-29188604 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 162 |
Conread position: | 72-471 |
Cow position: | chr24:33934272-33934700 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 171 |
Conread position: | 72-471 |
Cow position: | chr24:34494258-34493870 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 276 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 56, 171 |
Conread position: | 72-479 |
Cow position: | chr24:17696083-17695658 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 172 |
Conread position: | 72-487 |
Cow position: | chr24:6675508-6675937 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 277 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 49, 284 |
Conread position: | 72-489 |
Cow position: | chr24:36558872-36558435 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 7 |
Conread position: | 72-491 |
Cow position: | chr24:6337285-6337725 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 316 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 50, 176 |
Conread position: | 73-221 |
Cow position: | chr24:16083939-16084090 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 73-276 |
Cow position: | chr24:43814664-43814870 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 152 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 73-467 |
Cow position: | chr24:5992327-5991918 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 73-467 |
Cow position: | chr24:6435379-6435790 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 159 |
Conread position: | 73-468 |
Cow position: | chr24:6024203-6023797 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 202, 48 |
Conread position: | 73-468 |
Cow position: | chr24:13233152-13233566 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 73-468 |
Cow position: | chr24:19702385-19702806 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 138 |
Conread position: | 73-484 |
Cow position: | chr24:6084969-6085388 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 97 |
Conread position: | 73-488 |
Cow position: | chr24:6659591-6659168 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 52 |
Conread position: | 76-221 |
Cow position: | chr24:14383689-14383543 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 42, 122 |
Conread position: | 76-360 |
Cow position: | chr24:12205404-12205114 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 208 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 39, 105 |
Conread position: | 76-468 |
Cow position: | chr24:13189075-13189495 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 283 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 30, 207 |
Conread position: | 76-471 |
Cow position: | chr24:6332791-6332385 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 168 |
Conread position: | 76-471 |
Cow position: | chr24:12238200-12238603 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 148 |
Conread position: | 76-492 |
Cow position: | chr24:38638442-38638868 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 201 |
Conread position: | 77-308 |
Cow position: | chr24:12162815-12163053 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 178 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 35, 166 |
Conread position: | 77-375 |
Cow position: | chr24:36709268-36709582 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 215 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 21, 173 |
Conread position: | 77-385 |
Cow position: | chr24:12143432-12143129 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 207 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 44, 137 |
Conread position: | 77-471 |
Cow position: | chr24:14389638-14389222 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 75 |
Conread position: | 86-471 |
Cow position: | chr24:6129748-6130138 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 39 |
Conread position: | 88-471 |
Cow position: | chr24:8151350-8150976 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 269 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 189, 74 |
Conread position: | 88-471 |
Cow position: | chr24:14754587-14754998 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 155 |
Conread position: | 96-483 |
Cow position: | chr24:6142018-6142408 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 68 |
Conread position: | 102-384 |
Cow position: | chr24:31114578-31114860 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 196 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 19, 141 |
Conread position: | 113-428 |
Cow position: | chr24:25467674-25467360 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 214 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 126, 41 |
Conread position: | 113-430 |
Cow position: | chr24:31006483-31006166 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 217 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 222, 24 |
Conread position: | 115-328 |
Cow position: | chr24:6049491-6049709 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 60, 67 |
Conread position: | 133-468 |
Cow position: | chr24:12109742-12109395 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 107 |
Conread position: | 133-483 |
Cow position: | chr24:13044668-13044317 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 107 |
Conread position: | 133-487 |
Cow position: | chr24:17321667-17322040 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 264 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 99, 107 |
Conread position: | 133-493 |
Cow position: | chr24:12150350-12149979 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 108 |
Conread position: | 161-491 |
Cow position: | chr24:1450421-1450753 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 241 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 78, 35 |
Conread position: | 175-484 |
Cow position: | chr24:37320582-37320265 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 217 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 11, 146 |
Conread position: | 181-491 |
Cow position: | chr24:6668795-6668484 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 224 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 140, 47 |
Conread position: | 197-487 |
Cow position: | chr24:35869528-35869232 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 218 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 42, 36 |
Conread position: | 198-471 |
Cow position: | chr24:6353185-6353454 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 196 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 80, 92 |
Conread position: | 209-473 |
Cow position: | chr24:6064710-6064445 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 180 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 6, 33 |
Conread position: | 214-491 |
Cow position: | chr24:17409522-17409809 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 194 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 78, 276 |
Conread position: | 249-471 |
Cow position: | chr24:14383560-14383322 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 18 |
Show alignments to all cow chromosomes.