Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
| Conread position: | 20-471 |
| Cow position: | |
| Alignm length: | 473 |
| Alignm identity: | 307 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 153 |
| Conread position: | 56-385 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 61-469 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 210 |
| Conread position: | 69-248 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 69-468 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-468 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 183 |
| Conread position: | 69-471 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 164 |
| Conread position: | 69-471 |
| Cow position: | |
| Alignm length: | 419 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-483 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 69-483 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 69-483 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 75 |
| Conread position: | 69-487 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 115 |
| Conread position: | 69-488 |
| Cow position: | |
| Alignm length: | 446 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 72-230 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 72-269 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 49, 170 |
| Conread position: | 72-297 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 54, 171 |
| Conread position: | 72-430 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 103, 53 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 100 |
| Conread position: | 72-468 |
| Cow position: | |
| Alignm length: | 417 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 154 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 171 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 426 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 26, 10 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 101 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 60 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 420 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 174 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 162 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 162 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 171 |
| Conread position: | 72-471 |
| Cow position: | |
| Alignm length: | 406 |
| Alignm identity: | 276 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 56, 171 |
| Conread position: | 72-479 |
| Cow position: | |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-487 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 49, 284 |
| Conread position: | 72-489 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 72-491 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 50, 176 |
| Conread position: | 73-221 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 73-276 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-467 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-467 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 159 |
| Conread position: | 73-468 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 48 |
| Conread position: | 73-468 |
| Cow position: | |
| Alignm length: | 418 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-468 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 73-484 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 97 |
| Conread position: | 73-488 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 76-221 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 76-360 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 39, 105 |
| Conread position: | 76-468 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 207 |
| Conread position: | 76-471 |
| Cow position: | |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 168 |
| Conread position: | 76-471 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 148 |
| Conread position: | 76-492 |
| Cow position: | |
| Alignm length: | 433 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 201 |
| Conread position: | 77-308 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 35, 166 |
| Conread position: | 77-375 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 173 |
| Conread position: | 77-385 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 137 |
| Conread position: | 77-471 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 86-471 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 39 |
| Conread position: | 88-471 |
| Cow position: | |
| Alignm length: | 390 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 189, 74 |
| Conread position: | 88-471 |
| Cow position: | |
| Alignm length: | 415 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 155 |
| Conread position: | 96-483 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 68 |
| Conread position: | 102-384 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 113-428 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 126, 41 |
| Conread position: | 113-430 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 222, 24 |
| Conread position: | 115-328 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 67 |
| Conread position: | 133-468 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 133-483 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 133-487 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 133-493 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 108 |
| Conread position: | 161-491 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 175-484 |
| Cow position: | |
| Alignm length: | 324 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 181-491 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 140, 47 |
| Conread position: | 197-487 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 198-471 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 80, 92 |
| Conread position: | 209-473 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 214-491 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 276 |
| Conread position: | 249-471 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 18 |
Show alignments to all cow chromosomes.