Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
| Conread position: | 45-487 |
| Cow position: | chr26:1626837-1627298 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 69-360 |
| Cow position: | chr26:15143886-15143590 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 69-465 |
| Cow position: | chr26:1087576-1087158 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 287 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 69-483 |
| Cow position: | chr26:8919706-8920137 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 72-221 |
| Cow position: | chr26:4333422-4333271 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 72-466 |
| Cow position: | chr26:11031044-11031433 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 72-471 |
| Cow position: | chr26:6848565-6848152 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 72-471 |
| Cow position: | chr26:9561902-9561496 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 164 |
| Conread position: | 72-471 |
| Cow position: | chr26:14894822-14895233 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 160 |
| Conread position: | 72-471 |
| Cow position: | chr26:17396034-17395620 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-471 |
| Cow position: | chr26:19350635-19350229 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 73-307 |
| Cow position: | chr26:8870754-8870988 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 73-468 |
| Cow position: | chr26:12587687-12587273 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-483 |
| Cow position: | chr26:2351484-2351052 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 172 |
| Conread position: | 76-471 |
| Cow position: | chr26:18853102-18853512 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 76-483 |
| Cow position: | chr26:2199508-2199937 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 167 |
| Conread position: | 76-483 |
| Cow position: | chr26:21825803-21825381 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 77-468 |
| Cow position: | chr26:30783632-30784047 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 46, 172 |
| Conread position: | 77-485 |
| Cow position: | chr26:9844019-9843595 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 78-479 |
| Cow position: | chr26:30588483-30588067 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 80-481 |
| Cow position: | chr26:8614333-8613934 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 110 |
| Conread position: | 82-352 |
| Cow position: | chr26:4604294-4604016 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 98 |
| Conread position: | 92-434 |
| Cow position: | chr26:20264591-20264930 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 122-483 |
| Cow position: | chr26:11287212-11287571 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 113, 117 |
| Conread position: | 136-471 |
| Cow position: | chr26:2274575-2274251 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 139, 53 |
| Conread position: | 156-386 |
| Cow position: | chr26:6806121-6805893 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 120, 85 |
| Conread position: | 187-483 |
| Cow position: | chr26:3029851-3029542 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 198-471 |
| Cow position: | chr26:17325077-17325360 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 208-471 |
| Cow position: | chr26:5676124-5676398 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 326-487 |
| Cow position: | chr26:6805920-6805756 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 11, 32 |
Show alignments to all cow chromosomes.