Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10135F12.5 |
| Conread position: | 1-467 |
| Cow position: | chr3:64027454-64026989 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 63 |
| Conread position: | 49-323 |
| Cow position: | chr3:53411888-53412167 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 57-468 |
| Cow position: | chr3:7169927-7170350 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 69-248 |
| Cow position: | chr3:30331748-30331565 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 69-289 |
| Cow position: | chr3:24315206-24315431 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 44, 175 |
| Conread position: | 69-360 |
| Cow position: | chr3:31420075-31420373 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 173 |
| Conread position: | 69-448 |
| Cow position: | chr3:63915378-63914983 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-465 |
| Cow position: | chr3:19879392-19879790 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 173 |
| Conread position: | 69-468 |
| Cow position: | chr3:7157987-7157573 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-468 |
| Cow position: | chr3:12679105-12678695 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 211 |
| Conread position: | 69-471 |
| Cow position: | chr3:36863725-36863308 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-483 |
| Cow position: | chr3:4286822-4287252 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-483 |
| Cow position: | chr3:38493974-38494405 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 69-483 |
| Cow position: | chr3:47177535-47177105 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-483 |
| Cow position: | chr3:57753533-57753963 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 174 |
| Conread position: | 69-490 |
| Cow position: | chr3:64822834-64823278 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 184 |
| Conread position: | 70-483 |
| Cow position: | chr3:3057569-3057971 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 294 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 33, 134 |
| Conread position: | 72-254 |
| Cow position: | chr3:23213336-23213151 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 72-260 |
| Cow position: | chr3:7480488-7480299 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 162 |
| Conread position: | 72-261 |
| Cow position: | chr3:42432962-42433148 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 72-283 |
| Cow position: | chr3:45894810-45894599 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 72-319 |
| Cow position: | chr3:56098958-56099213 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 179 |
| Conread position: | 72-385 |
| Cow position: | chr3:18541400-18541075 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 72-442 |
| Cow position: | chr3:69100733-69100361 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 72-458 |
| Cow position: | chr3:50126892-50126469 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 72-465 |
| Cow position: | chr3:6686550-6686955 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 162 |
| Conread position: | 72-468 |
| Cow position: | chr3:72630816-72631212 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 160 |
| Conread position: | 72-471 |
| Cow position: | chr3:648765-648380 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 72-471 |
| Cow position: | chr3:2918203-2918617 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 171 |
| Conread position: | 72-471 |
| Cow position: | chr3:5884284-5884686 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 157 |
| Conread position: | 72-471 |
| Cow position: | chr3:5953440-5953044 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 161 |
| Conread position: | 72-471 |
| Cow position: | chr3:5994348-5993935 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-471 |
| Cow position: | chr3:10240397-10240813 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 171 |
| Conread position: | 72-471 |
| Cow position: | chr3:19756208-19755782 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 72-471 |
| Cow position: | chr3:21181960-21181544 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 72-471 |
| Cow position: | chr3:23289594-23289181 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 171 |
| Conread position: | 72-471 |
| Cow position: | chr3:24445338-24444923 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 72-471 |
| Cow position: | chr3:30315304-30315711 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 159 |
| Conread position: | 72-471 |
| Cow position: | chr3:40824132-40824543 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 159 |
| Conread position: | 72-471 |
| Cow position: | chr3:42447848-42448261 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 72-471 |
| Cow position: | chr3:45975243-45975649 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 171 |
| Conread position: | 72-471 |
| Cow position: | chr3:46503287-46503708 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 123 |
| Conread position: | 72-471 |
| Cow position: | chr3:49544469-49544055 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 151 |
| Conread position: | 72-471 |
| Cow position: | chr3:56339678-56339266 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 171 |
| Conread position: | 72-471 |
| Cow position: | chr3:59862113-59862531 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 162 |
| Conread position: | 72-471 |
| Cow position: | chr3:75040420-75040007 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 172 |
| Conread position: | 72-474 |
| Cow position: | chr3:53516352-53516757 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 163 |
| Conread position: | 72-482 |
| Cow position: | chr3:48058614-48058199 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 117 |
| Conread position: | 72-482 |
| Cow position: | chr3:66620924-66621345 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 108 |
| Conread position: | 72-483 |
| Cow position: | chr3:2710128-2709705 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 218 |
| Conread position: | 72-483 |
| Cow position: | chr3:2907030-2906608 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 188 |
| Conread position: | 72-483 |
| Cow position: | chr3:34030164-34029762 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 171 |
| Conread position: | 72-483 |
| Cow position: | chr3:63002803-63002381 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 171 |
| Conread position: | 72-489 |
| Cow position: | chr3:64016623-64016201 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 72-490 |
| Cow position: | chr3:56397926-56398353 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 19, 175 |
| Conread position: | 72-491 |
| Cow position: | chr3:19944970-19945410 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 72-491 |
| Cow position: | chr3:77424375-77424792 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 73-247 |
| Cow position: | chr3:40339371-40339194 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-260 |
| Cow position: | chr3:18462828-18462638 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 73-467 |
| Cow position: | chr3:47080671-47080264 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 169 |
| Conread position: | 73-468 |
| Cow position: | chr3:18860154-18860564 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-468 |
| Cow position: | chr3:19939634-19940039 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 284 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 51, 189 |
| Conread position: | 73-468 |
| Cow position: | chr3:30618184-30617773 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 172 |
| Conread position: | 73-468 |
| Cow position: | chr3:37969783-37970193 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-468 |
| Cow position: | chr3:68699222-68698826 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 266 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 51, 170 |
| Conread position: | 73-468 |
| Cow position: | chr3:68873012-68872608 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 297 |
| Conread position: | 73-470 |
| Cow position: | chr3:3523763-3524173 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 170 |
| Conread position: | 73-471 |
| Cow position: | chr3:46860560-46860140 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 173 |
| Conread position: | 73-483 |
| Cow position: | chr3:2869521-2869951 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 73-483 |
| Cow position: | chr3:27919164-27919590 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-483 |
| Cow position: | chr3:29330540-29330126 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 73-483 |
| Cow position: | chr3:32622301-32621877 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 142 |
| Conread position: | 73-483 |
| Cow position: | chr3:48842991-48843417 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 171 |
| Conread position: | 73-483 |
| Cow position: | chr3:64651370-64651800 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 174 |
| Conread position: | 73-483 |
| Cow position: | chr3:66890222-66889804 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 243 |
| Conread position: | 73-487 |
| Cow position: | chr3:45033489-45033913 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 170 |
| Conread position: | 74-262 |
| Cow position: | chr3:83232500-83232314 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 76-270 |
| Cow position: | chr3:36118407-36118604 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 76-283 |
| Cow position: | chr3:24589022-24588812 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 45, 166 |
| Conread position: | 76-304 |
| Cow position: | chr3:49678546-49678773 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 76-358 |
| Cow position: | chr3:20381287-20381574 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 76-360 |
| Cow position: | chr3:46680174-46680462 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 76-405 |
| Cow position: | chr3:3841066-3840716 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 169 |
| Conread position: | 76-468 |
| Cow position: | chr3:19800432-19800025 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 167 |
| Conread position: | 76-483 |
| Cow position: | chr3:50916082-50916507 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 77-468 |
| Cow position: | chr3:6783114-6783515 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 70 |
| Conread position: | 77-471 |
| Cow position: | chr3:57483981-57483577 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 77-471 |
| Cow position: | chr3:78026674-78026259 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 157 |
| Conread position: | 78-243 |
| Cow position: | chr3:34845893-34846061 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 79-438 |
| Cow position: | chr3:24346716-24347079 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 164 |
| Conread position: | 80-327 |
| Cow position: | chr3:42144114-42143863 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 162 |
| Conread position: | 81-444 |
| Cow position: | chr3:83294161-83293798 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 82-487 |
| Cow position: | chr3:29579376-29579795 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 83-359 |
| Cow position: | chr3:58948367-58948660 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 38, 161 |
| Conread position: | 83-487 |
| Cow position: | chr3:6877420-6877003 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 86-471 |
| Cow position: | chr3:18812263-18812651 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 139 |
| Conread position: | 92-283 |
| Cow position: | chr3:18355510-18355325 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 92-456 |
| Cow position: | chr3:24353666-24354037 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 260 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 92-474 |
| Cow position: | chr3:24643995-24644388 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 26, 163 |
| Conread position: | 92-483 |
| Cow position: | chr3:64357034-64356635 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 93-471 |
| Cow position: | chr3:11198793-11198397 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 94-487 |
| Cow position: | chr3:48229716-48229305 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 107-489 |
| Cow position: | chr3:42994894-42994506 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 95, 365 |
| Conread position: | 110-471 |
| Cow position: | chr3:49136776-49136419 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 10 |
| Conread position: | 113-478 |
| Cow position: | chr3:54771652-54772011 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 185, 77 |
| Conread position: | 113-483 |
| Cow position: | chr3:70887922-70888303 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 113-488 |
| Cow position: | chr3:79431920-79431540 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 119, 68 |
| Conread position: | 114-290 |
| Cow position: | chr3:34090589-34090416 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 114-471 |
| Cow position: | chr3:16075281-16075645 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 129, 115 |
| Conread position: | 114-488 |
| Cow position: | chr3:63200398-63200779 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 158, 13 |
| Conread position: | 114-489 |
| Cow position: | chr3:40342905-40343295 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 184 |
| Conread position: | 116-483 |
| Cow position: | chr3:15181153-15181518 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 67 |
| Conread position: | 117-375 |
| Cow position: | chr3:4028961-4029221 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 121-487 |
| Cow position: | chr3:4737076-4736715 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 88 |
| Conread position: | 122-303 |
| Cow position: | chr3:36877891-36877712 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 117, 110 |
| Conread position: | 122-489 |
| Cow position: | chr3:37953202-37952828 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 127-437 |
| Cow position: | chr3:24458366-24458057 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 171, 141 |
| Conread position: | 133-483 |
| Cow position: | chr3:2368526-2368174 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 133-483 |
| Cow position: | chr3:34506543-34506180 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 107 |
| Conread position: | 139-471 |
| Cow position: | chr3:56146131-56146466 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 158-487 |
| Cow position: | chr3:52653817-52653476 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 66, 83 |
| Conread position: | 178-483 |
| Cow position: | chr3:67164134-67164453 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 198-483 |
| Cow position: | chr3:25499807-25499518 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 43 |
| Conread position: | 199-468 |
| Cow position: | chr3:74058408-74058678 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 204-483 |
| Cow position: | chr3:55892285-55892578 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 137 |
| Conread position: | 205-487 |
| Cow position: | chr3:19124461-19124749 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 208-487 |
| Cow position: | chr3:77444346-77444616 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 113, 72 |
| Conread position: | 214-491 |
| Cow position: | chr3:18942929-18943205 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 255-471 |
| Cow position: | chr3:7478997-7478769 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 258-491 |
| Cow position: | chr3:15054743-15054509 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 271-471 |
| Cow position: | chr3:595087-595287 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 123 |
| Conread position: | 283-488 |
| Cow position: | chr3:53412092-53412298 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 48 |
| Conread position: | 342-467 |
| Cow position: | chr3:20382047-20382174 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 353-479 |
| Cow position: | chr3:36877626-36877496 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.