Cow genome map

Conread name: Ss1.1-Ova1-OVRM10135F12.5

Conread position: 1-467
Cow position:
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 63

Conread position: 49-323
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 12

Conread position: 57-468
Cow position:
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 22

Conread position: 69-248
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 175

Conread position: 69-289
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 175

Conread position: 69-360
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 173

Conread position: 69-448
Cow position:
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-465
Cow position:
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 173

Conread position: 69-468
Cow position:
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-468
Cow position:
Alignm length: 420
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 211

Conread position: 69-471
Cow position:
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 24

Conread position: 69-483
Cow position:
Alignm length: 432
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-490
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 184

Conread position: 70-483
Cow position:
Alignm length: 425
Alignm identity: 294
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 33, 134

Conread position: 72-254
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 162

Conread position: 72-260
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 162

Conread position: 72-261
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 77

Conread position: 72-283
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 108

Conread position: 72-319
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 179

Conread position: 72-385
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 50, 41

Conread position: 72-442
Cow position:
Alignm length: 379
Alignm identity: 236
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 61

Conread position: 72-458
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 9

Conread position: 72-465
Cow position:
Alignm length: 409
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-468
Cow position:
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 160

Conread position: 72-471
Cow position:
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 53

Conread position: 72-471
Cow position:
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 171

Conread position: 72-471
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 157

Conread position: 72-471
Cow position:
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 161

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 72-471
Cow position:
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 159

Conread position: 72-471
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 159

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 133

Conread position: 72-471
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 72-471
Cow position:
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 123

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 151

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 172

Conread position: 72-474
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 163

Conread position: 72-482
Cow position:
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 117

Conread position: 72-482
Cow position:
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 108

Conread position: 72-483
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 218

Conread position: 72-483
Cow position:
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 188

Conread position: 72-483
Cow position:
Alignm length: 419
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-483
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 72-489
Cow position:
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 87

Conread position: 72-490
Cow position:
Alignm length: 438
Alignm identity: 294
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 19, 175

Conread position: 72-491
Cow position:
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 171

Conread position: 72-491
Cow position:
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 73-247
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 170

Conread position: 73-260
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 73-467
Cow position:
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 169

Conread position: 73-468
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-468
Cow position:
Alignm length: 415
Alignm identity: 284
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 189

Conread position: 73-468
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 172

Conread position: 73-468
Cow position:
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-468
Cow position:
Alignm length: 405
Alignm identity: 266
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 51, 170

Conread position: 73-468
Cow position:
Alignm length: 409
Alignm identity: 263
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 297

Conread position: 73-470
Cow position:
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 170

Conread position: 73-471
Cow position:
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 173

Conread position: 73-483
Cow position:
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 73-483
Cow position:
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-483
Cow position:
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-483
Cow position:
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 142

Conread position: 73-483
Cow position:
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 171

Conread position: 73-483
Cow position:
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 174

Conread position: 73-483
Cow position:
Alignm length: 422
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 243

Conread position: 73-487
Cow position:
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 74-262
Cow position:
Alignm length: 190
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 59

Conread position: 76-270
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 167

Conread position: 76-283
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 166

Conread position: 76-304
Cow position:
Alignm length: 232
Alignm identity: 178
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 164

Conread position: 76-358
Cow position:
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 167

Conread position: 76-360
Cow position:
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 77

Conread position: 76-405
Cow position:
Alignm length: 353
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 169

Conread position: 76-468
Cow position:
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 167

Conread position: 76-483
Cow position:
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 61

Conread position: 77-468
Cow position:
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 70

Conread position: 77-471
Cow position:
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 77-471
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 157

Conread position: 78-243
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 102

Conread position: 79-438
Cow position:
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 164

Conread position: 80-327
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 41, 162

Conread position: 81-444
Cow position:
Alignm length: 372
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 103

Conread position: 82-487
Cow position:
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 84

Conread position: 83-359
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 38, 161

Conread position: 83-487
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 92

Conread position: 86-471
Cow position:
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 139

Conread position: 92-283
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 48

Conread position: 92-456
Cow position:
Alignm length: 379
Alignm identity: 260
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 12, 101

Conread position: 92-474
Cow position:
Alignm length: 402
Alignm identity: 276
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 163

Conread position: 92-483
Cow position:
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 181

Conread position: 93-471
Cow position:
Alignm length: 400
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 51

Conread position: 94-487
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 83

Conread position: 107-489
Cow position:
Alignm length: 392
Alignm identity: 259
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 95, 365

Conread position: 110-471
Cow position:
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 10

Conread position: 113-478
Cow position:
Alignm length: 370
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 185, 77

Conread position: 113-483
Cow position:
Alignm length: 389
Alignm identity: 266
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 63, 37

Conread position: 113-488
Cow position:
Alignm length: 391
Alignm identity: 266
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 119, 68

Conread position: 114-290
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 114-471
Cow position:
Alignm length: 368
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 129, 115

Conread position: 114-488
Cow position:
Alignm length: 389
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 158, 13

Conread position: 114-489
Cow position:
Alignm length: 393
Alignm identity: 263
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 184

Conread position: 116-483
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 67

Conread position: 117-375
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 58, 66

Conread position: 121-487
Cow position:
Alignm length: 374
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 107, 88

Conread position: 122-303
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 117, 110

Conread position: 122-489
Cow position:
Alignm length: 381
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 113, 83

Conread position: 127-437
Cow position:
Alignm length: 320
Alignm identity: 208
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 171, 141

Conread position: 133-483
Cow position:
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 108

Conread position: 133-483
Cow position:
Alignm length: 365
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 107

Conread position: 139-471
Cow position:
Alignm length: 348
Alignm identity: 251
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 11, 87

Conread position: 158-487
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 83

Conread position: 178-483
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 54, 62

Conread position: 198-483
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 43

Conread position: 199-468
Cow position:
Alignm length: 280
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 44

Conread position: 204-483
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 137

Conread position: 205-487
Cow position:
Alignm length: 292
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 36

Conread position: 208-487
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 72

Conread position: 214-491
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 18, 29

Conread position: 255-471
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 258-491
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 54

Conread position: 271-471
Cow position:
Alignm length: 203
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 123

Conread position: 283-488
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 48

Conread position: 342-467
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 353-479
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.