Cow genome map

Conread name: Ss1.1-Ova1-OVRM10135F12.5

Conread position: 6-492
Cow position: chr4:51042814-51042313 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 274

Conread position: 60-465
Cow position: chr4:5926307-5925890 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 273
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 22

Conread position: 66-420
Cow position: chr4:19251994-19252352 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 52, 119

Conread position: 69-467
Cow position: chr4:17093322-17092910 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-468
Cow position: chr4:4416615-4417015 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-487
Cow position: chr4:18337407-18337828 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 299

Conread position: 69-489
Cow position: chr4:14775986-14776433 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 58, 185

Conread position: 69-491
Cow position: chr4:11110720-11110300 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 202

Conread position: 69-491
Cow position: chr4:22473890-22474325 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 298
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 177

Conread position: 71-471
Cow position: chr4:1049718-1049301 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 173

Conread position: 71-483
Cow position: chr4:27300934-27300512 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 71-484
Cow position: chr4:6206142-6206579 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 297
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 9

Conread position: 72-238
Cow position: chr4:29531332-29531167 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 160, 10

Conread position: 72-296
Cow position: chr4:19006009-19005782 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 47, 171

Conread position: 72-308
Cow position: chr4:31669823-31670063 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 190, 0

Conread position: 72-317
Cow position: chr4:34183993-34183746 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 10

Conread position: 72-351
Cow position: chr4:18517446-18517729 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 171

Conread position: 72-373
Cow position: chr4:47254386-47254078 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 172

Conread position: 72-418
Cow position: chr4:33494138-33494495 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 72-465
Cow position: chr4:45298538-45298148 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 72-467
Cow position: chr4:43319095-43318685 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-468
Cow position: chr4:12587880-12588287 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-468
Cow position: chr4:33072273-33071870 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-469
Cow position: chr4:25598948-25598544 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 28

Conread position: 72-471
Cow position: chr4:10882094-10882508 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position: chr4:16360459-16360874 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 222

Conread position: 72-471
Cow position: chr4:31564758-31564345 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 130

Conread position: 72-471
Cow position: chr4:36896920-36897333 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position: chr4:43881653-43882063 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position: chr4:44726144-44726546 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 41

Conread position: 72-471
Cow position: chr4:57984529-57984945 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 393

Conread position: 72-471
Cow position: chr4:67681739-67682153 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 173

Conread position: 72-479
Cow position: chr4:12240663-12240250 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 88

Conread position: 72-482
Cow position: chr4:356457-356879 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 123

Conread position: 72-482
Cow position: chr4:17925414-17924996 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 169

Conread position: 72-483
Cow position: chr4:44924975-44924563 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 278
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 112

Conread position: 72-483
Cow position: chr4:49716223-49716643 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 291
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 49, 151

Conread position: 72-483
Cow position: chr4:60263614-60263188 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 72-489
Cow position: chr4:46665065-46665504 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 191

Conread position: 72-491
Cow position: chr4:28832107-28832536 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 95

Conread position: 73-279
Cow position: chr4:18190943-18191151 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 170

Conread position: 73-467
Cow position: chr4:18423977-18423568 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 133

Conread position: 73-468
Cow position: chr4:603563-603970 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 172

Conread position: 73-468
Cow position: chr4:3126340-3126760 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 122

Conread position: 73-468
Cow position: chr4:5880710-5881112 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 48

Conread position: 73-468
Cow position: chr4:27334261-27334666 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-468
Cow position: chr4:32212717-32213120 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 171

Conread position: 73-470
Cow position: chr4:5444288-5443874 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-483
Cow position: chr4:16057227-16057652 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 74-478
Cow position: chr4:6519322-6519731 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 254
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 64

Conread position: 75-297
Cow position: chr4:3132052-3131830 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 198

Conread position: 76-436
Cow position: chr4:39270851-39270481 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 166

Conread position: 76-468
Cow position: chr4:1930080-1929685 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 103

Conread position: 76-468
Cow position: chr4:44780674-44780269 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 167

Conread position: 76-470
Cow position: chr4:159709-160120 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 167

Conread position: 77-308
Cow position: chr4:48026955-48027187 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 55

Conread position: 77-465
Cow position: chr4:62568984-62569357 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 255
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 134

Conread position: 77-468
Cow position: chr4:529951-530360 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 166

Conread position: 77-471
Cow position: chr4:6489811-6489404 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 167

Conread position: 77-471
Cow position: chr4:13493871-13494289 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 157

Conread position: 77-471
Cow position: chr4:16639163-16639571 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 166

Conread position: 77-479
Cow position: chr4:41333263-41333654 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 20

Conread position: 79-317
Cow position: chr4:47521622-47521857 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 26

Conread position: 80-277
Cow position: chr4:100249-100049 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 163

Conread position: 88-468
Cow position: chr4:4438905-4439285 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 258
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 106

Conread position: 92-487
Cow position: chr4:14820302-14819891 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 154

Conread position: 94-284
Cow position: chr4:41958983-41959176 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 149

Conread position: 94-467
Cow position: chr4:13870583-13870959 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 10

Conread position: 94-467
Cow position: chr4:41955322-41955715 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 149

Conread position: 97-483
Cow position: chr4:30471804-30472204 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 60

Conread position: 98-471
Cow position: chr4:45106031-45106419 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 145

Conread position: 107-471
Cow position: chr4:27294737-27294347 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 136

Conread position: 113-489
Cow position: chr4:20604314-20604706 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 16, 128

Conread position: 114-478
Cow position: chr4:1367562-1367204 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 12

Conread position: 114-486
Cow position: chr4:61713013-61712637 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 258
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 121, 52

Conread position: 115-487
Cow position: chr4:4177864-4178232 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 67

Conread position: 117-419
Cow position: chr4:10093504-10093808 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 115, 75

Conread position: 121-491
Cow position: chr4:50975232-50975606 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 119

Conread position: 122-470
Cow position: chr4:13126193-13125844 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 176, 46

Conread position: 127-468
Cow position: chr4:54969325-54969684 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 104, 58

Conread position: 127-481
Cow position: chr4:38930009-38930375 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 113

Conread position: 135-483
Cow position: chr4:69521177-69521508 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 12

Conread position: 155-488
Cow position: chr4:967447-967100 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 86

Conread position: 175-485
Cow position: chr4:493952-493629 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 13

Conread position: 187-483
Cow position: chr4:9847560-9847242 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 54

Conread position: 200-471
Cow position: chr4:61693836-61693562 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 32, 8

Conread position: 202-483
Cow position: chr4:28149115-28149389 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 108

Conread position: 212-471
Cow position: chr4:26877090-26876821 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 7

Conread position: 224-491
Cow position: chr4:34178537-34178256 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 19

Conread position: 259-487
Cow position: chr4:99482-99236 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 38

Conread position: 310-484
Cow position: chr4:34183822-34183656 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 10

Conread position: 335-487
Cow position: chr4:19005487-19005331 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 118

Conread position: 354-468
Cow position: chr4:48027658-48027773 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 17

Show alignments to all cow chromosomes.