Cow genome map

Conread name: Ss1.1-Ova1-OVRM10135F12.5

Conread position: 1-483
Cow position:
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 336

Conread position: 1-485
Cow position:
Alignm length: 526
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 189

Conread position: 12-471
Cow position:
Alignm length: 493
Alignm identity: 331
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 240

Conread position: 46-468
Cow position:
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 23

Conread position: 69-280
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 142

Conread position: 69-346
Cow position:
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 174

Conread position: 69-360
Cow position:
Alignm length: 298
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 174

Conread position: 69-427
Cow position:
Alignm length: 373
Alignm identity: 251
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 174

Conread position: 69-468
Cow position:
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 182

Conread position: 69-468
Cow position:
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 182

Conread position: 69-471
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 175

Conread position: 69-483
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 69-483
Cow position:
Alignm length: 434
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 69-483
Cow position:
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-487
Cow position:
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 174

Conread position: 70-474
Cow position:
Alignm length: 423
Alignm identity: 280
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 103

Conread position: 70-483
Cow position:
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 71-471
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 71-483
Cow position:
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 172

Conread position: 72-249
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 55, 49

Conread position: 72-272
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 171

Conread position: 72-273
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 55, 172

Conread position: 72-297
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 163, 55

Conread position: 72-303
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 99

Conread position: 72-318
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 50, 84

Conread position: 72-345
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 107

Conread position: 72-424
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-463
Cow position:
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 53

Conread position: 72-468
Cow position:
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 60

Conread position: 72-468
Cow position:
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 172

Conread position: 72-468
Cow position:
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 122

Conread position: 72-471
Cow position:
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 167

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 72-471
Cow position:
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 205

Conread position: 72-471
Cow position:
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 176

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 164

Conread position: 72-471
Cow position:
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 124

Conread position: 72-471
Cow position:
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 246

Conread position: 72-471
Cow position:
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 172

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 162

Conread position: 72-471
Cow position:
Alignm length: 406
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 283

Conread position: 72-471
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 168

Conread position: 72-479
Cow position:
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 72-482
Cow position:
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 175

Conread position: 72-483
Cow position:
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 72-487
Cow position:
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 46

Conread position: 72-489
Cow position:
Alignm length: 437
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 72-491
Cow position:
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 90

Conread position: 73-270
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 18

Conread position: 73-277
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 50, 171

Conread position: 73-467
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-467
Cow position:
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 71

Conread position: 73-468
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 118

Conread position: 73-468
Cow position:
Alignm length: 413
Alignm identity: 285
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 171

Conread position: 73-468
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 173

Conread position: 73-468
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-469
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 170

Conread position: 73-471
Cow position:
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 175

Conread position: 73-474
Cow position:
Alignm length: 419
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 169

Conread position: 73-483
Cow position:
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-487
Cow position:
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 106

Conread position: 73-490
Cow position:
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 173

Conread position: 76-483
Cow position:
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 185

Conread position: 77-277
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 57

Conread position: 77-279
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 174

Conread position: 77-471
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 122

Conread position: 77-471
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 69

Conread position: 77-471
Cow position:
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 156

Conread position: 77-471
Cow position:
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 166

Conread position: 78-360
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 7

Conread position: 78-471
Cow position:
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 153

Conread position: 78-482
Cow position:
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 112

Conread position: 78-487
Cow position:
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 164

Conread position: 80-490
Cow position:
Alignm length: 448
Alignm identity: 300
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 165

Conread position: 81-471
Cow position:
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 138

Conread position: 83-328
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 160

Conread position: 84-454
Cow position:
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 159

Conread position: 84-469
Cow position:
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 215

Conread position: 86-355
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 83

Conread position: 86-482
Cow position:
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 162

Conread position: 88-471
Cow position:
Alignm length: 389
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 98, 41

Conread position: 88-472
Cow position:
Alignm length: 387
Alignm identity: 247
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 294, 44

Conread position: 89-487
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 98

Conread position: 92-353
Cow position:
Alignm length: 266
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 140

Conread position: 93-483
Cow position:
Alignm length: 427
Alignm identity: 296
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 9, 40

Conread position: 102-484
Cow position:
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 103

Conread position: 106-437
Cow position:
Alignm length: 345
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 79

Conread position: 106-448
Cow position:
Alignm length: 353
Alignm identity: 225
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 39

Conread position: 109-447
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 102

Conread position: 114-504
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 119, 98

Conread position: 122-471
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 47

Conread position: 122-471
Cow position:
Alignm length: 367
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 176, 53

Conread position: 127-471
Cow position:
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 14

Conread position: 127-492
Cow position:
Alignm length: 373
Alignm identity: 242
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 109, 114

Conread position: 132-488
Cow position:
Alignm length: 392
Alignm identity: 267
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 36

Conread position: 133-444
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 99, 106

Conread position: 134-483
Cow position:
Alignm length: 375
Alignm identity: 265
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 44

Conread position: 135-469
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 96

Conread position: 138-467
Cow position:
Alignm length: 341
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 102

Conread position: 143-471
Cow position:
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 90

Conread position: 149-488
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 22

Conread position: 151-471
Cow position:
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 90

Conread position: 155-483
Cow position:
Alignm length: 346
Alignm identity: 240
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 77, 85

Conread position: 173-471
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 62, 68

Conread position: 173-471
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 67

Conread position: 191-483
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 50

Conread position: 192-483
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 16

Conread position: 205-471
Cow position:
Alignm length: 279
Alignm identity: 202
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 38

Conread position: 220-468
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 23

Conread position: 233-471
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 7

Conread position: 239-483
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 248-483
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 48

Conread position: 259-471
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 143

Conread position: 259-483
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 22

Conread position: 288-471
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 8

Conread position: 342-489
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 15

Conread position: 343-483
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 47

Conread position: 365-468
Cow position:
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.