Cow genome map

Conread name: Ss1.1-Ova1-OVRM10135F12.5

Conread position: 1-486
Cow position:
Alignm length: 505
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 83

Conread position: 43-471
Cow position:
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 28

Conread position: 55-465
Cow position:
Alignm length: 418
Alignm identity: 263
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 159

Conread position: 61-332
Cow position:
Alignm length: 278
Alignm identity: 205
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 162

Conread position: 61-483
Cow position:
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 207

Conread position: 69-266
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 176

Conread position: 69-280
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 176

Conread position: 69-289
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 54, 174

Conread position: 69-468
Cow position:
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 178

Conread position: 69-468
Cow position:
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 173

Conread position: 69-471
Cow position:
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 175

Conread position: 69-471
Cow position:
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 179

Conread position: 69-482
Cow position:
Alignm length: 432
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 165

Conread position: 69-483
Cow position:
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 128

Conread position: 69-483
Cow position:
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 174

Conread position: 69-483
Cow position:
Alignm length: 440
Alignm identity: 292
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 149

Conread position: 70-454
Cow position:
Alignm length: 396
Alignm identity: 263
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 20, 171

Conread position: 70-483
Cow position:
Alignm length: 433
Alignm identity: 289
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 53, 140

Conread position: 71-483
Cow position:
Alignm length: 432
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 175

Conread position: 71-489
Cow position:
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 72-288
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 55, 162

Conread position: 72-302
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 55, 61

Conread position: 72-319
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 160, 54

Conread position: 72-352
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 170

Conread position: 72-360
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 248, 61

Conread position: 72-402
Cow position:
Alignm length: 348
Alignm identity: 242
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 165

Conread position: 72-437
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 97

Conread position: 72-449
Cow position:
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 235

Conread position: 72-465
Cow position:
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-466
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 127

Conread position: 72-471
Cow position:
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 72-471
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 72-471
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 164

Conread position: 72-471
Cow position:
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 159

Conread position: 72-471
Cow position:
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 172

Conread position: 72-471
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 171

Conread position: 72-471
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 72-471
Cow position:
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 41

Conread position: 72-476
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 175

Conread position: 72-480
Cow position:
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 173

Conread position: 72-481
Cow position:
Alignm length: 432
Alignm identity: 287
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 172

Conread position: 72-482
Cow position:
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 161

Conread position: 72-483
Cow position:
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 63

Conread position: 72-487
Cow position:
Alignm length: 442
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 213

Conread position: 72-489
Cow position:
Alignm length: 433
Alignm identity: 279
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 172

Conread position: 72-491
Cow position:
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 37

Conread position: 72-491
Cow position:
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 130

Conread position: 73-435
Cow position:
Alignm length: 385
Alignm identity: 269
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 170

Conread position: 73-448
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 169

Conread position: 73-468
Cow position:
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-468
Cow position:
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 73-468
Cow position:
Alignm length: 413
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 170

Conread position: 73-468
Cow position:
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 170

Conread position: 73-468
Cow position:
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 122

Conread position: 73-468
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 170

Conread position: 73-492
Cow position:
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 76-289
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 102

Conread position: 76-471
Cow position:
Alignm length: 442
Alignm identity: 311
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 93

Conread position: 76-487
Cow position:
Alignm length: 436
Alignm identity: 293
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 14

Conread position: 76-489
Cow position:
Alignm length: 435
Alignm identity: 300
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 45, 34

Conread position: 76-491
Cow position:
Alignm length: 439
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 60

Conread position: 76-491
Cow position:
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 168

Conread position: 77-423
Cow position:
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 77-467
Cow position:
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 171

Conread position: 77-482
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 167

Conread position: 78-479
Cow position:
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 163

Conread position: 78-479
Cow position:
Alignm length: 422
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 5

Conread position: 79-471
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 31

Conread position: 80-479
Cow position:
Alignm length: 407
Alignm identity: 248
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 29

Conread position: 81-359
Cow position:
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 150, 40

Conread position: 85-471
Cow position:
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 158

Conread position: 86-471
Cow position:
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 47

Conread position: 88-491
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 152

Conread position: 89-483
Cow position:
Alignm length: 420
Alignm identity: 293
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 200

Conread position: 91-481
Cow position:
Alignm length: 406
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 134

Conread position: 91-491
Cow position:
Alignm length: 414
Alignm identity: 269
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 94

Conread position: 93-471
Cow position:
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 150

Conread position: 97-487
Cow position:
Alignm length: 411
Alignm identity: 280
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 146

Conread position: 98-464
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 64

Conread position: 98-483
Cow position:
Alignm length: 413
Alignm identity: 270
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 86

Conread position: 100-471
Cow position:
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 101-442
Cow position:
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 190, 19

Conread position: 102-460
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 23

Conread position: 106-426
Cow position:
Alignm length: 350
Alignm identity: 234
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 136

Conread position: 114-489
Cow position:
Alignm length: 380
Alignm identity: 251
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 86, 161

Conread position: 114-491
Cow position:
Alignm length: 396
Alignm identity: 259
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 196, 125

Conread position: 121-487
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 122-472
Cow position:
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 111

Conread position: 126-442
Cow position:
Alignm length: 330
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 117

Conread position: 127-475
Cow position:
Alignm length: 357
Alignm identity: 236
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 64

Conread position: 127-487
Cow position:
Alignm length: 368
Alignm identity: 240
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 43

Conread position: 132-416
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 55

Conread position: 133-289
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 99, 15

Conread position: 133-468
Cow position:
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 107

Conread position: 136-478
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 104

Conread position: 137-383
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 95, 103

Conread position: 141-483
Cow position:
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 46

Conread position: 145-487
Cow position:
Alignm length: 355
Alignm identity: 229
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 76, 152

Conread position: 149-483
Cow position:
Alignm length: 349
Alignm identity: 237
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 83, 91

Conread position: 154-318
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 54

Conread position: 155-468
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 83, 171

Conread position: 178-490
Cow position:
Alignm length: 324
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 157

Conread position: 181-486
Cow position:
Alignm length: 313
Alignm identity: 204
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 131, 117

Conread position: 186-471
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 55

Conread position: 192-384
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 45

Conread position: 198-483
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 10

Conread position: 199-450
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 42

Conread position: 199-483
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 99

Conread position: 200-457
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 42

Conread position: 257-487
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 9

Conread position: 261-483
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 36

Conread position: 335-469
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 343-483
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 127, 14

Conread position: 366-486
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.