Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10148B09.5 |
| Conread position: | 1-216 |
| Cow position: | chr12:24029173-24029384 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 150, 5 |
| Conread position: | 1-221 |
| Cow position: | chr12:21497586-21497802 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-221 |
| Cow position: | chr12:41288641-41288421 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 5 |
| Conread position: | 1-227 |
| Cow position: | chr12:250011-250228 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-227 |
| Cow position: | chr12:3716964-3717189 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-227 |
| Cow position: | chr12:10164654-10164873 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-227 |
| Cow position: | chr12:25096956-25097181 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-228 |
| Cow position: | chr12:11101557-11101332 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:10931394-10931168 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:12754847-12755074 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:18585982-18585755 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:27506340-27506567 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:27929482-27929709 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:27994410-27994183 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:42232619-42232392 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-229 |
| Cow position: | chr12:42856221-42856449 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 101, 5 |
| Conread position: | 1-231 |
| Cow position: | chr12:551505-551734 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-231 |
| Cow position: | chr12:2242678-2242906 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-231 |
| Cow position: | chr12:21718868-21719096 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-231 |
| Cow position: | chr12:41337923-41338152 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 2-134 |
| Cow position: | chr12:19868523-19868390 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 2-165 |
| Cow position: | chr12:7885577-7885741 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 2-194 |
| Cow position: | chr12:23159197-23159384 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 2-214 |
| Cow position: | chr12:15821032-15820828 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 171, 38 |
| Conread position: | 2-227 |
| Cow position: | chr12:1774615-1774834 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 2-227 |
| Cow position: | chr12:4830526-4830302 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 2-227 |
| Cow position: | chr12:19198341-19198127 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-228 |
| Cow position: | chr12:20847444-20847222 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 2-231 |
| Cow position: | chr12:8841749-8841975 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 103 |
| Conread position: | 2-231 |
| Cow position: | chr12:12928601-12928826 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 2-231 |
| Cow position: | chr12:15925444-15925671 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-236 |
| Cow position: | chr12:48416436-48416669 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 56, 36 |
| Conread position: | 5-140 |
| Cow position: | chr12:19496067-19496203 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-164 |
| Cow position: | chr12:15720256-15720415 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 153 |
| Conread position: | 5-221 |
| Cow position: | chr12:21223205-21223424 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-227 |
| Cow position: | chr12:14568508-14568730 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-227 |
| Cow position: | chr12:19155553-19155775 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 5-229 |
| Cow position: | chr12:8674760-8674983 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 5-229 |
| Cow position: | chr12:28737831-28737608 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-229 |
| Cow position: | chr12:30501946-30501723 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 5-229 |
| Cow position: | chr12:35367710-35367488 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 5-231 |
| Cow position: | chr12:24981026-24980802 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 5-231 |
| Cow position: | chr12:32105946-32105719 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-231 |
| Cow position: | chr12:39930475-39930249 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-161 |
| Cow position: | chr12:13042936-13043091 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 6-172 |
| Cow position: | chr12:36445692-36445527 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 6-174 |
| Cow position: | chr12:2228876-2228707 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 6-177 |
| Cow position: | chr12:7961441-7961607 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 70 |
| Conread position: | 6-183 |
| Cow position: | chr12:23294539-23294363 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-193 |
| Cow position: | chr12:22979588-22979773 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 6-194 |
| Cow position: | chr12:15760346-15760158 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 161 |
| Conread position: | 6-195 |
| Cow position: | chr12:18936134-18935946 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 6-203 |
| Cow position: | chr12:41973467-41973665 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 6-205 |
| Cow position: | chr12:1408123-1407932 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 6-209 |
| Cow position: | chr12:5165687-5165485 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 121, 42 |
| Conread position: | 6-214 |
| Cow position: | chr12:36213583-36213376 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 6-215 |
| Cow position: | chr12:36569038-36569247 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 11, 203 |
| Conread position: | 6-218 |
| Cow position: | chr12:10075964-10075755 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-226 |
| Cow position: | chr12:21452672-21452892 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-226 |
| Cow position: | chr12:21904664-21904452 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 6-226 |
| Cow position: | chr12:25313408-25313627 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 6-227 |
| Cow position: | chr12:19871518-19871296 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 6-227 |
| Cow position: | chr12:32656854-32656633 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-229 |
| Cow position: | chr12:1476356-1476577 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 6-229 |
| Cow position: | chr12:15797221-15797013 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 6-229 |
| Cow position: | chr12:23520856-23521080 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 6-229 |
| Cow position: | chr12:28012926-28013149 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-229 |
| Cow position: | chr12:33296935-33296715 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-229 |
| Cow position: | chr12:36453243-36453462 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 6-230 |
| Cow position: | chr12:8839559-8839335 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-230 |
| Cow position: | chr12:35547823-35548045 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:61902-62127 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:259035-258810 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:1007322-1007096 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:1056203-1056427 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:1405754-1405529 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:1438214-1437990 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:1511458-1511683 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:3094318-3094551 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 79, 160 |
| Conread position: | 6-231 |
| Cow position: | chr12:5107363-5107138 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:5110759-5110980 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:6106049-6106268 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:7674207-7673982 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:8773969-8773746 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 145, 41 |
| Conread position: | 6-231 |
| Cow position: | chr12:10359001-10358776 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:11582465-11582250 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:14423655-14423430 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:15231340-15231115 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:16302033-16302258 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:17718606-17718381 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:20994461-20994684 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:21075141-21074917 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:21212089-21211864 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:21251009-21251231 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:21665441-21665216 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:21888737-21888962 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:22517547-22517771 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:22594075-22593846 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 6-231 |
| Cow position: | chr12:22748521-22748295 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:23138023-23138248 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:25148313-25148537 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:25266028-25266252 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:27958220-27958445 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:30687047-30686821 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:31027515-31027739 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:31829144-31829369 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:32011472-32011697 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:32147324-32147547 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:32339951-32340176 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 6-231 |
| Cow position: | chr12:32758002-32757777 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:32848869-32848653 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 56, 36 |
| Conread position: | 6-231 |
| Cow position: | chr12:33925392-33925617 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:34176670-34176445 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:36287710-36287932 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:37562310-37562090 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 203, 73 |
| Conread position: | 6-231 |
| Cow position: | chr12:38893669-38893444 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:42604878-42605095 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:43681310-43681085 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:45145358-45145133 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-231 |
| Cow position: | chr12:46111812-46112037 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-247 |
| Cow position: | chr12:42795227-42794987 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 99, 152 |
| Conread position: | 6-979 |
| Cow position: | chr12:21432646-21431672 (view UCSC Genome Browser custom track) |
| Alignm length: | 975 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-221 |
| Cow position: | chr12:23378433-23378222 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 7-229 |
| Cow position: | chr12:21610907-21610686 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 7-229 |
| Cow position: | chr12:27852637-27852862 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 7-231 |
| Cow position: | chr12:3180713-3180495 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 7-231 |
| Cow position: | chr12:17981704-17981490 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-231 |
| Cow position: | chr12:21484714-21484492 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 7-231 |
| Cow position: | chr12:21862124-21862347 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 7-231 |
| Cow position: | chr12:24557882-24557660 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 8-127 |
| Cow position: | chr12:29412935-29413054 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-229 |
| Cow position: | chr12:20459416-20459636 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 8-231 |
| Cow position: | chr12:5713267-5713044 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-231 |
| Cow position: | chr12:9988382-9988606 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 9-229 |
| Cow position: | chr12:21314128-21314347 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 38 |
| Conread position: | 10-229 |
| Cow position: | chr12:36341137-36341351 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 11-214 |
| Cow position: | chr12:40306599-40306396 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-214 |
| Cow position: | chr12:28571683-28571482 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 12-231 |
| Cow position: | chr12:15939566-15939781 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 17-227 |
| Cow position: | chr12:35311618-35311828 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 194, 74 |
| Conread position: | 17-231 |
| Cow position: | chr12:47803465-47803252 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 52 |
| Conread position: | 18-227 |
| Cow position: | chr12:758714-758505 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 29 |
| Conread position: | 53-189 |
| Cow position: | chr12:4800819-4800955 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-236 |
| Cow position: | chr12:21391769-21391947 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 61-226 |
| Cow position: | chr12:22566285-22566121 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 61-231 |
| Cow position: | chr12:29128112-29128281 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 66-231 |
| Cow position: | chr12:19040859-19040694 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-231 |
| Cow position: | chr12:23511932-23512098 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 66-231 |
| Cow position: | chr12:27614661-27614496 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-229 |
| Cow position: | chr12:6441599-6441759 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 69-231 |
| Cow position: | chr12:1491409-1491247 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-231 |
| Cow position: | chr12:1789402-1789564 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-231 |
| Cow position: | chr12:5327668-5327829 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 69-231 |
| Cow position: | chr12:5776887-5777049 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-231 |
| Cow position: | chr12:21010236-21010398 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 136 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-231 |
| Cow position: | chr12:32901034-32900872 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-231 |
| Cow position: | chr12:35161851-35161688 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 69-231 |
| Cow position: | chr12:35163007-35162844 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 70-232 |
| Cow position: | chr12:29486229-29486392 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 128 |
| Conread position: | 76-231 |
| Cow position: | chr12:21303664-21303509 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-231 |
| Cow position: | chr12:32088503-32088347 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 80-227 |
| Cow position: | chr12:1343685-1343538 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 80-231 |
| Cow position: | chr12:17969219-17969069 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 121-231 |
| Cow position: | chr12:34514461-34514571 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.