Cow genome map

Conread name: Ss1.1-Ova1-OVRM10148B09.5

Conread position: 1-125
Cow position: chr16:48371476-48371599 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 110
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 1-176
Cow position: chr16:5488498-5488324 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 1-218
Cow position: chr16:49530030-49529815 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 1-226
Cow position: chr16:25263228-25263015 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 5

Conread position: 1-227
Cow position: chr16:4461685-4461909 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-227
Cow position: chr16:19671616-19671832 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 5

Conread position: 1-227
Cow position: chr16:23533372-23533597 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 34, 5

Conread position: 1-227
Cow position: chr16:25344606-25344380 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 5

Conread position: 1-228
Cow position: chr16:12018394-12018168 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 20, 5

Conread position: 1-228
Cow position: chr16:54322796-54323017 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:417522-417295 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:1563761-1563988 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:1734366-1734139 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 165, 0

Conread position: 1-229
Cow position: chr16:2724597-2724824 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:3769384-3769610 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:4426717-4426491 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:5435452-5435225 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:7673834-7674061 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:8813478-8813702 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 39, 5

Conread position: 1-229
Cow position: chr16:12160656-12160880 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:14662481-14662708 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:15187691-15187468 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:15495081-15494858 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:21018186-21017959 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 5

Conread position: 1-229
Cow position: chr16:23985940-23985712 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 216, 5

Conread position: 1-229
Cow position: chr16:24240773-24241000 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:26666331-26666104 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:27730754-27730981 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:31586073-31586296 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:37446072-37446298 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:41033926-41033700 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:42711286-42711513 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:43894635-43894862 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:46101992-46102217 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:48411262-48411035 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:52524918-52524694 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr16:52526858-52526633 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr16:7467239-7467011 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr16:14352057-14352283 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr16:15979751-15979980 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr16:28206484-28206713 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr16:41036399-41036628 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr16:42176527-42176298 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 5

Conread position: 1-234
Cow position: chr16:2480522-2480753 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-236
Cow position: chr16:40293544-40293777 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 2-139
Cow position: chr16:34506353-34506215 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 2-175
Cow position: chr16:4722105-4721938 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 2-184
Cow position: chr16:5833425-5833246 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 152
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 0

Conread position: 2-229
Cow position: chr16:1958100-1958319 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 2-229
Cow position: chr16:15570397-15570169 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 2-229
Cow position: chr16:18694345-18694572 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 64

Conread position: 2-229
Cow position: chr16:20201699-20201474 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 135

Conread position: 2-229
Cow position: chr16:23065636-23065406 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 65, 31

Conread position: 2-231
Cow position: chr16:13422296-13422524 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 204, 15

Conread position: 2-231
Cow position: chr16:13777538-13777308 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 190

Conread position: 2-231
Cow position: chr16:16540036-16539807 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 48

Conread position: 2-231
Cow position: chr16:23875913-23876132 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 163, 0

Conread position: 2-231
Cow position: chr16:45704170-45704394 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 2-235
Cow position: chr16:16095826-16095593 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-229
Cow position: chr16:45816491-45816715 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 28

Conread position: 4-177
Cow position: chr16:25168861-25168689 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 5-108
Cow position: chr16:23737317-23737214 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-161
Cow position: chr16:49473167-49473012 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 5-221
Cow position: chr16:30052569-30052357 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 5-229
Cow position: chr16:5763466-5763246 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 5-229
Cow position: chr16:28468499-28468723 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 5-229
Cow position: chr16:43770529-43770751 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 5-229
Cow position: chr16:44049296-44049524 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 5-229
Cow position: chr16:45550766-45550546 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 85

Conread position: 5-229
Cow position: chr16:50874215-50874441 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 35

Conread position: 5-230
Cow position: chr16:45754998-45755213 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 5-231
Cow position: chr16:15349526-15349749 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 5-231
Cow position: chr16:15804929-15804704 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 64

Conread position: 5-231
Cow position: chr16:15904592-15904806 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 37

Conread position: 5-231
Cow position: chr16:20634591-20634819 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 12

Conread position: 5-231
Cow position: chr16:34532918-34532692 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 5-231
Cow position: chr16:44256509-44256725 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 5-231
Cow position: chr16:49511177-49511401 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 5-231
Cow position: chr16:51041171-51040950 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 5-232
Cow position: chr16:47772888-47772658 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 165

Conread position: 5-236
Cow position: chr16:49127067-49127296 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 24

Conread position: 6-139
Cow position: chr16:42751774-42751640 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 6-147
Cow position: chr16:16680972-16681113 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-147
Cow position: chr16:49516158-49516302 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 83

Conread position: 6-156
Cow position: chr16:7385388-7385238 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-170
Cow position: chr16:29093747-29093587 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 134

Conread position: 6-175
Cow position: chr16:27013020-27012856 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 30

Conread position: 6-194
Cow position: chr16:2960302-2960114 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-194
Cow position: chr16:18212572-18212760 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-199
Cow position: chr16:15485413-15485222 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 6-204
Cow position: chr16:54179741-54179939 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-212
Cow position: chr16:7457359-7457565 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-212
Cow position: chr16:41575866-41575671 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 169
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 6-217
Cow position: chr16:43783-43574 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 25, 46

Conread position: 6-218
Cow position: chr16:24925674-24925462 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 75

Conread position: 6-219
Cow position: chr16:24445063-24444851 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 80, 0

Conread position: 6-220
Cow position: chr16:237102-236904 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 211, 22

Conread position: 6-221
Cow position: chr16:23711664-23711879 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-221
Cow position: chr16:28268093-28268307 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 6-221
Cow position: chr16:29158240-29158030 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 41

Conread position: 6-221
Cow position: chr16:37442914-37443128 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 6-221
Cow position: chr16:53225697-53225912 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-223
Cow position: chr16:25893131-25892918 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 152, 0

Conread position: 6-224
Cow position: chr16:3332526-3332313 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 36

Conread position: 6-225
Cow position: chr16:34482785-34482559 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 58

Conread position: 6-227
Cow position: chr16:3819990-3819767 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 56, 41

Conread position: 6-227
Cow position: chr16:5416653-5416866 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 0

Conread position: 6-227
Cow position: chr16:8481997-8482218 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 6-227
Cow position: chr16:24209775-24209996 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-227
Cow position: chr16:36247093-36246876 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 6-227
Cow position: chr16:45654958-45655188 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 218

Conread position: 6-228
Cow position: chr16:2394985-2394764 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 41

Conread position: 6-228
Cow position: chr16:46365179-46365397 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 187, 0

Conread position: 6-229
Cow position: chr16:3148417-3148630 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 6-229
Cow position: chr16:4972902-4973125 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chr16:10440862-10440639 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chr16:14569574-14569796 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 190, 0

Conread position: 6-229
Cow position: chr16:24061883-24062099 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 6-229
Cow position: chr16:25444499-25444278 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 6-229
Cow position: chr16:25454838-25455061 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 205, 93

Conread position: 6-229
Cow position: chr16:26654285-26654067 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 6-229
Cow position: chr16:27010802-27010581 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 32

Conread position: 6-229
Cow position: chr16:41164151-41164371 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 6-229
Cow position: chr16:41683677-41683904 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 6-229
Cow position: chr16:42074275-42074498 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 147

Conread position: 6-229
Cow position: chr16:44127233-44127456 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chr16:49742906-49743123 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 41, 34

Conread position: 6-230
Cow position: chr16:3011461-3011237 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-230
Cow position: chr16:12244418-12244642 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-230
Cow position: chr16:25088232-25088007 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 6-231
Cow position: chr16:41157-40932 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:193313-193537 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 10, 74

Conread position: 6-231
Cow position: chr16:701884-701659 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:2233103-2233328 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:3349631-3349413 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chr16:4343283-4343505 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 6-231
Cow position: chr16:4756646-4756423 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 6-231
Cow position: chr16:5525476-5525706 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 120, 0

Conread position: 6-231
Cow position: chr16:6264354-6264579 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:6677344-6677118 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 201, 0

Conread position: 6-231
Cow position: chr16:6706092-6706317 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:7303379-7303154 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:8871819-8872033 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 152, 54

Conread position: 6-231
Cow position: chr16:10859704-10859927 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 170, 0

Conread position: 6-231
Cow position: chr16:11054614-11054387 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 49, 43

Conread position: 6-231
Cow position: chr16:12485677-12485902 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 64

Conread position: 6-231
Cow position: chr16:12651551-12651326 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:13602013-13602240 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 15, 38

Conread position: 6-231
Cow position: chr16:13721966-13722192 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 211, 0

Conread position: 6-231
Cow position: chr16:14040048-14039824 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 141, 0

Conread position: 6-231
Cow position: chr16:14100475-14100250 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:15311904-15311681 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 106, 0

Conread position: 6-231
Cow position: chr16:16150125-16150349 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position: chr16:17142026-17141804 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 121, 0

Conread position: 6-231
Cow position: chr16:18975491-18975267 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 190, 0

Conread position: 6-231
Cow position: chr16:19081675-19081450 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:20278463-20278238 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:22799081-22799306 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:24407533-24407308 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:24615442-24615667 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:25075216-25074991 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:25157777-25157995 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 6-231
Cow position: chr16:25879939-25879714 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:26388545-26388767 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 6-231
Cow position: chr16:26627375-26627150 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:26990317-26990542 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:27593199-27593424 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:28022443-28022649 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 6-231
Cow position: chr16:28167696-28167920 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 15, 0

Conread position: 6-231
Cow position: chr16:28193677-28193902 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:31425681-31425448 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 29, 74

Conread position: 6-231
Cow position: chr16:32326484-32326262 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 40, 80

Conread position: 6-231
Cow position: chr16:37053661-37053436 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:37058390-37058611 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chr16:37146600-37146375 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:37454861-37455079 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 6-231
Cow position: chr16:39615845-39615622 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 43

Conread position: 6-231
Cow position: chr16:40879215-40878990 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:41515755-41515530 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:42211119-42210894 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:45465294-45465519 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:45534085-45533860 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:46555045-46554820 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:47018127-47018350 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 6-231
Cow position: chr16:47367609-47367395 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 167, 103

Conread position: 6-231
Cow position: chr16:47404003-47403780 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chr16:49387911-49387687 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 186, 0

Conread position: 6-231
Cow position: chr16:49780327-49780552 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:50712816-50713041 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr16:51087406-51087182 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 6-231
Cow position: chr16:53612425-53612203 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 6-231
Cow position: chr16:53991578-53991358 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 51

Conread position: 6-231
Cow position: chr16:54287161-54286943 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 123

Conread position: 6-231
Cow position: chr16:55682127-55681912 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 6-231
Cow position: chr16:56913615-56913834 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 6-236
Cow position: chr16:7155227-7154993 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 142, 159

Conread position: 6-236
Cow position: chr16:18650961-18651189 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 6-236
Cow position: chr16:20204626-20204397 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 43

Conread position: 6-236
Cow position: chr16:20643111-20642884 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 6-236
Cow position: chr16:37486633-37486863 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 40, 159

Conread position: 6-243
Cow position: chr16:24987881-24988118 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 6-426
Cow position: chr16:18426029-18425606 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 162

Conread position: 7-162
Cow position: chr16:23810143-23809988 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 40

Conread position: 7-215
Cow position: chr16:2304984-2304774 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 7-218
Cow position: chr16:5665723-5665509 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 173, 0

Conread position: 7-229
Cow position: chr16:11633222-11633444 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 7-231
Cow position: chr16:21189880-21189656 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 7-231
Cow position: chr16:25173862-25173644 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 7-231
Cow position: chr16:25964531-25964309 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 7-231
Cow position: chr16:37478239-37478462 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 122, 0

Conread position: 7-231
Cow position: chr16:39475450-39475228 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 19

Conread position: 7-236
Cow position: chr16:12736903-12736672 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 7-236
Cow position: chr16:16993788-16993569 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 7-244
Cow position: chr16:54293571-54293345 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 49

Conread position: 8-231
Cow position: chr16:15812689-15812466 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 9-217
Cow position: chr16:18745410-18745618 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 9-229
Cow position: chr16:13042859-13042641 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 37

Conread position: 10-229
Cow position: chr16:2408275-2408494 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 10-229
Cow position: chr16:44147874-44147653 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 127, 79

Conread position: 10-231
Cow position: chr16:10372815-10373036 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 11-177
Cow position: chr16:49142455-49142621 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 137
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 11-229
Cow position: chr16:26656697-26656477 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 111, 106

Conread position: 11-231
Cow position: chr16:27710586-27710801 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 12-120
Cow position: chr16:24147275-24147166 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 12-215
Cow position: chr16:20378068-20377867 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 12-229
Cow position: chr16:340395-340182 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 12-229
Cow position: chr16:600041-599824 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 37

Conread position: 12-229
Cow position: chr16:839894-839681 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 12-229
Cow position: chr16:4398876-4398649 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 12-229
Cow position: chr16:12535331-12535538 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 154, 0

Conread position: 12-229
Cow position: chr16:19722573-19722355 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 187

Conread position: 12-229
Cow position: chr16:42118360-42118152 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 114, 0

Conread position: 12-229
Cow position: chr16:43562778-43562995 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 12-229
Cow position: chr16:49253628-49253840 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 12-230
Cow position: chr16:25042670-25042452 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 163

Conread position: 12-231
Cow position: chr16:658577-658359 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 28

Conread position: 12-231
Cow position: chr16:45609032-45608813 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-231
Cow position: chr16:49219329-49219551 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 14-230
Cow position: chr16:41624065-41624281 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 42

Conread position: 14-262
Cow position: chr16:7084315-7084070 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 17-231
Cow position: chr16:46224021-46224233 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 18-231
Cow position: chr16:10812676-10812461 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 18-231
Cow position: chr16:11006575-11006786 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 19-215
Cow position: chr16:43801975-43801774 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 25-231
Cow position: chr16:42080013-42080215 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 165
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 26-231
Cow position: chr16:37670890-37671099 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 100, 12

Conread position: 28-221
Cow position: chr16:48104686-48104493 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 146

Conread position: 35-230
Cow position: chr16:48495542-48495737 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 103

Conread position: 51-229
Cow position: chr16:14440950-14440772 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 58-230
Cow position: chr16:28433504-28433675 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 8

Conread position: 63-231
Cow position: chr16:5844499-5844328 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 19

Conread position: 66-183
Cow position: chr16:7341187-7341304 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 66-229
Cow position: chr16:25260686-25260524 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 66-231
Cow position: chr16:24988154-24988319 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position: chr16:29036437-29036275 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 19

Conread position: 69-172
Cow position: chr16:28159286-28159183 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 69-231
Cow position: chr16:7022459-7022299 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 69-231
Cow position: chr16:26317271-26317109 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 69-231
Cow position: chr16:54479766-54479604 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 71-231
Cow position: chr16:55591422-55591580 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 148, 0

Conread position: 72-231
Cow position: chr16:13538867-13539026 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 76-231
Cow position: chr16:712913-712758 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 129
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 85-231
Cow position: chr16:49230742-49230883 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 87-231
Cow position: chr16:35042-34898 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 99-231
Cow position: chr16:6945790-6945658 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 113-231
Cow position: chr16:819464-819346 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 118-231
Cow position: chr16:9431559-9431672 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 125-231
Cow position: chr16:17111756-17111650 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.