Cow genome map

Conread name: Ss1.1-Ova1-OVRM10148B09.5

Conread position: 1-171
Cow position: chr20:23802529-23802360 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 1-172
Cow position: chr20:5958766-5958936 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-174
Cow position: chr20:15240656-15240827 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 1-226
Cow position: chr20:31846449-31846677 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 5

Conread position: 1-227
Cow position: chr20:17657853-17658078 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 168, 5

Conread position: 1-227
Cow position: chr20:23466270-23466496 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 127, 5

Conread position: 1-229
Cow position: chr20:3676999-3677222 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 50

Conread position: 1-229
Cow position: chr20:6550619-6550846 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr20:12435021-12435245 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr20:12567937-12568164 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr20:15089993-15090220 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr20:28725138-28724909 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 114, 5

Conread position: 1-231
Cow position: chr20:9410744-9410514 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 39

Conread position: 1-231
Cow position: chr20:10921546-10921772 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr20:21719936-21719708 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr20:38000867-38000640 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 1-234
Cow position: chr20:22209000-22208768 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-234
Cow position: chr20:41111043-41111273 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 1-235
Cow position: chr20:25845246-25845477 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-236
Cow position: chr20:13766270-13766038 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 5

Conread position: 1-236
Cow position: chr20:33181119-33181353 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-238
Cow position: chr20:14512075-14511838 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 5

Conread position: 2-118
Cow position: chr20:22064699-22064815 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-170
Cow position: chr20:3468760-3468592 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 2-172
Cow position: chr20:35112410-35112240 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 46

Conread position: 2-180
Cow position: chr20:32085073-32085253 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 2-191
Cow position: chr20:16515702-16515514 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 164, 0

Conread position: 2-228
Cow position: chr20:5795153-5794927 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 96, 49

Conread position: 2-229
Cow position: chr20:9339392-9339176 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 2-229
Cow position: chr20:10494570-10494351 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 2-229
Cow position: chr20:39445433-39445201 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 182

Conread position: 2-231
Cow position: chr20:4205028-4204804 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 2-231
Cow position: chr20:7810463-7810690 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 102, 0

Conread position: 2-231
Cow position: chr20:9707750-9707980 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 103

Conread position: 2-231
Cow position: chr20:10405073-10404847 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 2-231
Cow position: chr20:13050178-13050424 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 152, 71

Conread position: 2-236
Cow position: chr20:11516662-11516894 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 84, 20

Conread position: 3-218
Cow position: chr20:30816454-30816671 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 3-229
Cow position: chr20:34643391-34643169 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 3-231
Cow position: chr20:7597479-7597707 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 5-172
Cow position: chr20:6500297-6500468 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 5-221
Cow position: chr20:7512564-7512775 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 5-228
Cow position: chr20:2682606-2682386 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 5-228
Cow position: chr20:12333057-12332836 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 27, 0

Conread position: 5-229
Cow position: chr20:25988126-25987907 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 172, 34

Conread position: 5-230
Cow position: chr20:10035366-10035583 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 5-231
Cow position: chr20:6053985-6054205 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 5-231
Cow position: chr20:14721004-14721228 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 50, 12

Conread position: 5-231
Cow position: chr20:24567892-24568119 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 5-231
Cow position: chr20:24904168-24904394 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-231
Cow position: chr20:30146811-30146585 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-233
Cow position: chr20:28483209-28482985 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 211, 46

Conread position: 5-234
Cow position: chr20:27896074-27896295 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 6-125
Cow position: chr20:18322182-18322302 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 115, 0

Conread position: 6-141
Cow position: chr20:26075932-26075797 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-146
Cow position: chr20:14877435-14877295 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-163
Cow position: chr20:26999870-26999714 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 86

Conread position: 6-172
Cow position: chr20:15780826-15780991 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 6-176
Cow position: chr20:7995168-7995338 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-199
Cow position: chr20:28113357-28113172 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 6-205
Cow position: chr20:28282441-28282245 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 6-206
Cow position: chr20:11331299-11331499 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-207
Cow position: chr20:40256037-40255838 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 6-212
Cow position: chr20:12155986-12156185 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 6-213
Cow position: chr20:3782329-3782536 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-214
Cow position: chr20:6258919-6259125 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 63

Conread position: 6-218
Cow position: chr20:13024954-13025166 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 23

Conread position: 6-221
Cow position: chr20:12685207-12685415 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 121, 60

Conread position: 6-224
Cow position: chr20:8445787-8445570 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 0

Conread position: 6-224
Cow position: chr20:14211010-14211221 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 6-229
Cow position: chr20:775033-774810 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chr20:5538547-5538334 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 0

Conread position: 6-229
Cow position: chr20:13660970-13661193 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chr20:15068190-15067966 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 76

Conread position: 6-229
Cow position: chr20:20364369-20364590 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 99

Conread position: 6-229
Cow position: chr20:22185639-22185860 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 6-229
Cow position: chr20:27876861-27876633 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 134, 0

Conread position: 6-229
Cow position: chr20:28294696-28294464 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 6-229
Cow position: chr20:28560519-28560732 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 6-229
Cow position: chr20:30689249-30689027 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 165, 97

Conread position: 6-229
Cow position: chr20:34231495-34231704 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 6-230
Cow position: chr20:753816-753591 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 148, 0

Conread position: 6-230
Cow position: chr20:826155-825931 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-230
Cow position: chr20:13506187-13506407 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 37, 45

Conread position: 6-231
Cow position: chr20:3808398-3808623 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:5085962-5086187 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:5503372-5503597 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:6135616-6135840 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 135, 0

Conread position: 6-231
Cow position: chr20:7568591-7568815 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 146, 63

Conread position: 6-231
Cow position: chr20:7593078-7593302 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 146, 63

Conread position: 6-231
Cow position: chr20:8970518-8970743 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:9223227-9223002 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:9589150-9588926 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 116, 91

Conread position: 6-231
Cow position: chr20:10790829-10790606 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 6-231
Cow position: chr20:12177115-12177340 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:13303923-13304148 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:13653959-13654180 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 145, 181

Conread position: 6-231
Cow position: chr20:14672711-14672492 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 6-231
Cow position: chr20:14741561-14741337 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 6-231
Cow position: chr20:14925267-14925492 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:16559157-16559382 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:18490321-18490099 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 6-231
Cow position: chr20:19018033-19018254 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 6-231
Cow position: chr20:19155788-19156007 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 6-231
Cow position: chr20:19364510-19364731 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 6-231
Cow position: chr20:20092674-20092449 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:20439594-20439820 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 142, 0

Conread position: 6-231
Cow position: chr20:20731633-20731409 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 49, 35

Conread position: 6-231
Cow position: chr20:21398192-21397969 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 74

Conread position: 6-231
Cow position: chr20:22048741-22048516 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:22060802-22061027 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:22222229-22222454 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 220

Conread position: 6-231
Cow position: chr20:25658649-25658873 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position: chr20:26052978-26053203 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:26738152-26737927 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:28246877-28247100 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 9, 0

Conread position: 6-231
Cow position: chr20:28443974-28444198 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 183, 73

Conread position: 6-231
Cow position: chr20:28956576-28956801 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:29371046-29371271 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 34, 44

Conread position: 6-231
Cow position: chr20:30384870-30385095 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:30431646-30431422 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 168, 0

Conread position: 6-231
Cow position: chr20:30479484-30479258 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 6-231
Cow position: chr20:30579238-30579013 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:30737649-30737424 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:31504708-31504480 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 6-231
Cow position: chr20:32164729-32164949 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 170, 0

Conread position: 6-231
Cow position: chr20:32351975-32351752 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 6-231
Cow position: chr20:32639386-32639160 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 0

Conread position: 6-231
Cow position: chr20:35093912-35093688 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 6-231
Cow position: chr20:37154591-37154817 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 106, 0

Conread position: 6-231
Cow position: chr20:38957513-38957288 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr20:39234606-39234381 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-233
Cow position: chr20:9996911-9996682 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 6-234
Cow position: chr20:35844055-35844285 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 54, 217

Conread position: 6-235
Cow position: chr20:36197709-36197942 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 151

Conread position: 6-236
Cow position: chr20:14756891-14757125 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 36

Conread position: 6-236
Cow position: chr20:15527120-15526890 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position: chr20:16106823-16106593 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position: chr20:18092525-18092756 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 106, 0

Conread position: 6-236
Cow position: chr20:28887747-28887517 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position: chr20:34968358-34968127 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 7-217
Cow position: chr20:36374826-36375033 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 33

Conread position: 7-218
Cow position: chr20:27994150-27994361 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 108, 47

Conread position: 7-227
Cow position: chr20:13816996-13816775 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 187, 0

Conread position: 7-229
Cow position: chr20:15295392-15295172 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 0

Conread position: 7-229
Cow position: chr20:24399491-24399713 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 7-229
Cow position: chr20:33295576-33295797 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 177, 130

Conread position: 7-234
Cow position: chr20:13954995-13954773 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 200, 68

Conread position: 8-197
Cow position: chr20:6097292-6097480 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 78, 0

Conread position: 10-109
Cow position: chr20:13501036-13500936 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 10-204
Cow position: chr20:3510227-3510034 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 138, 89

Conread position: 10-231
Cow position: chr20:29806571-29806790 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 67

Conread position: 11-229
Cow position: chr20:15799589-15799808 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 138
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 59, 0

Conread position: 12-169
Cow position: chr20:20935762-20935918 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 37

Conread position: 12-177
Cow position: chr20:34597990-34598151 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 114, 0

Conread position: 12-185
Cow position: chr20:33246936-33247109 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-205
Cow position: chr20:16944866-16944675 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 65

Conread position: 12-231
Cow position: chr20:9536270-9536055 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 12-231
Cow position: chr20:12996893-12997117 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 67

Conread position: 13-231
Cow position: chr20:13325478-13325260 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 93

Conread position: 18-231
Cow position: chr20:12047854-12047644 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 18-231
Cow position: chr20:31220659-31220448 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 60, 13

Conread position: 28-184
Cow position: chr20:39284520-39284364 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 46-231
Cow position: chr20:42923887-42923705 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 51-231
Cow position: chr20:28034535-28034714 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 57-231
Cow position: chr20:19425514-19425343 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 64-230
Cow position: chr20:19441225-19441059 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 64-231
Cow position: chr20:31785064-31785223 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 66-229
Cow position: chr20:23804565-23804728 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 66-229
Cow position: chr20:35037284-35037119 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 66-231
Cow position: chr20:5269718-5269882 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 141, 13

Conread position: 66-231
Cow position: chr20:6239820-6239984 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 66-231
Cow position: chr20:26799969-26800134 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position: chr20:35020234-35020072 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 19

Conread position: 66-231
Cow position: chr20:35159270-35159432 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 69-231
Cow position: chr20:19306073-19306235 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 69-231
Cow position: chr20:33597652-33597814 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 70-231
Cow position: chr20:18608597-18608439 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 71-229
Cow position: chr20:21015706-21015858 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 71-236
Cow position: chr20:8786602-8786437 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 72-231
Cow position: chr20:24542735-24542576 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 73-231
Cow position: chr20:14745920-14745762 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 73-231
Cow position: chr20:31157908-31157750 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 76-227
Cow position: chr20:13575410-13575560 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 79-231
Cow position: chr20:5077288-5077136 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 88-226
Cow position: chr20:10839181-10839319 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 90-231
Cow position: chr20:6476809-6476669 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 114-231
Cow position: chr20:35107920-35108037 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 124-231
Cow position: chr20:42085790-42085683 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.