Cow genome map

Conread name: Ss1.1-Ova1-OVRM10148B09.5

Conread position: 1-179
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 1-218
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-227
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-228
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 111, 5

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 5

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 102, 5

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 5

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 167, 5

Conread position: 1-232
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 1-236
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 2-221
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 37

Conread position: 2-229
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 192, 8

Conread position: 2-229
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 149, 72

Conread position: 2-229
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 101, 26

Conread position: 2-229
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 41

Conread position: 2-230
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-231
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 2-238
Cow position:
Alignm length: 238
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 172, 194

Conread position: 3-176
Cow position:
Alignm length: 174
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-229
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-231
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 5-229
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 36

Conread position: 5-231
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 46

Conread position: 5-231
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 5-231
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 5-236
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 176

Conread position: 6-131
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-149
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-159
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 153

Conread position: 6-170
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-172
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-184
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 6-190
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 6-199
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 34, 44

Conread position: 6-199
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 6-212
Cow position:
Alignm length: 207
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-215
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 6-215
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 83, 0

Conread position: 6-215
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-218
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 176, 27

Conread position: 6-221
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 63, 0

Conread position: 6-227
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 6-227
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 188, 43

Conread position: 6-228
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 151, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 63

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 210, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 36

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-230
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 54, 60

Conread position: 6-230
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 6-230
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 210, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 0

Conread position: 6-231
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 36

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 137, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 107, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 152, 19

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 228
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 37

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-233
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 128

Conread position: 6-237
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 7-158
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 7-192
Cow position:
Alignm length: 187
Alignm identity: 153
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 7-221
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 71

Conread position: 7-229
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 91, 0

Conread position: 7-229
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 7-231
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 93

Conread position: 7-236
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 10-202
Cow position:
Alignm length: 193
Alignm identity: 151
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 11-171
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 11-175
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-229
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 66

Conread position: 11-231
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 11-231
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 51, 38

Conread position: 12-163
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 40

Conread position: 12-229
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 12-231
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 12-231
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 13-231
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-231
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 177, 197

Conread position: 17-231
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 18-227
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 20-227
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 113, 29

Conread position: 38-221
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 45-231
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 49-202
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 49-231
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 65-229
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 66-229
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position:
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 69-231
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 69-231
Cow position:
Alignm length: 163
Alignm identity: 135
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 88-221
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 92-231
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 8

Conread position: 114-218
Cow position:
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.