Cow genome map

Conread name: Ss1.1-Ova1-OVRM10148B09.5

Conread position: 1-171
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 1-176
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-206
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 1-225
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 1-226
Cow position:
Alignm length: 226
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-227
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 82, 5

Conread position: 1-227
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 5

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 176, 29

Conread position: 1-231
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 78

Conread position: 1-231
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 79

Conread position: 2-175
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 2-226
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 2-229
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 193, 40

Conread position: 2-229
Cow position:
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 2-229
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 2-229
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 2-229
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 14

Conread position: 2-230
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 2-231
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 2-231
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 2-231
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 2-231
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 2-232
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 2-234
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 13

Conread position: 2-236
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 3-183
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 5-194
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 5-218
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 5-221
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 132, 23

Conread position: 5-226
Cow position:
Alignm length: 224
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 69

Conread position: 5-227
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 128, 0

Conread position: 5-229
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 5-229
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 5-231
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 131

Conread position: 5-234
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 5-236
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 6-146
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-158
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-164
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-172
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 6-175
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position:
Alignm length: 170
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 6-184
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 6-191
Cow position:
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 10

Conread position: 6-199
Cow position:
Alignm length: 196
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 43

Conread position: 6-199
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 129

Conread position: 6-199
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 0

Conread position: 6-203
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 45

Conread position: 6-206
Cow position:
Alignm length: 202
Alignm identity: 159
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 141, 43

Conread position: 6-215
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-217
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 16

Conread position: 6-221
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 25

Conread position: 6-222
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 19, 23

Conread position: 6-226
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 6-227
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 34, 0

Conread position: 6-227
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 190, 0

Conread position: 6-228
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 6-228
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 126, 0

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 152, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 73

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 6-229
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 22

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 131, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 74, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 6-231
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 41

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 142, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 159, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 190, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 15, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 0

Conread position: 6-233
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 150, 36

Conread position: 7-229
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 44

Conread position: 7-229
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 7-231
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 131, 44

Conread position: 8-209
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 145, 110

Conread position: 8-231
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 9-234
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 10-218
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 32

Conread position: 10-231
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 10-231
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 11-209
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 12-231
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 140, 79

Conread position: 12-272
Cow position:
Alignm length: 261
Alignm identity: 153
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 243, 0

Conread position: 14-227
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 74

Conread position: 17-204
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 134, 0

Conread position: 17-205
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 18-205
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 109, 25

Conread position: 19-218
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 152, 29

Conread position: 63-229
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 66-227
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 107, 13

Conread position: 69-231
Cow position:
Alignm length: 163
Alignm identity: 133
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 77-231
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 0

Conread position: 83-231
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 92-231
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 111-231
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 121-231
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.