Cow genome map

Conread name: Ss1.1-Ova1-OVRM10148B09.5

Conread position: 1-221
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 5

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-230
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 5

Conread position: 1-231
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 115, 5

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 157, 5

Conread position: 1-231
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 5

Conread position: 1-236
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 80

Conread position: 2-227
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 161, 0

Conread position: 2-231
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 5-206
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 26

Conread position: 5-229
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 11

Conread position: 5-230
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 5-231
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 5-231
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 44

Conread position: 5-231
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 5-238
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 223, 0

Conread position: 6-149
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 39

Conread position: 6-159
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-164
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 6-170
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-172
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 6-184
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 31, 9

Conread position: 6-193
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 121

Conread position: 6-203
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 71

Conread position: 6-206
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-206
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 6-214
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 177

Conread position: 6-214
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 141, 113

Conread position: 6-214
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 0

Conread position: 6-216
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 6-218
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 152, 0

Conread position: 6-218
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 190, 0

Conread position: 6-221
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 152, 0

Conread position: 6-221
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 72

Conread position: 6-226
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 6-227
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-227
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 45

Conread position: 6-228
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-228
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 136

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 6-229
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 91

Conread position: 6-229
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 97, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 183, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 171

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 64

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 217, 0

Conread position: 6-231
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 87

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 80, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 169, 25

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 28, 158

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 145, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 199, 179

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 10, 80

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 171, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 183, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 153, 135

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 105, 0

Conread position: 6-231
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 7-227
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 200, 0

Conread position: 7-231
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 7-231
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 8-175
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 8-231
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 42

Conread position: 9-229
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 46, 68

Conread position: 9-231
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 41, 33

Conread position: 11-231
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 70, 89

Conread position: 12-191
Cow position:
Alignm length: 180
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 12-192
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 19

Conread position: 12-229
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 30

Conread position: 12-229
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 37

Conread position: 12-231
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 13-213
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 36

Conread position: 17-229
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 17-231
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 64

Conread position: 18-180
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 107, 0

Conread position: 49-236
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 7

Conread position: 51-176
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 61-229
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 66-230
Cow position:
Alignm length: 166
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 109, 45

Conread position: 66-231
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 69-175
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 73-229
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 79-229
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 39

Conread position: 80-228
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 80-233
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 91-221
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 99-203
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.