Cow genome map

Conread name: Ss1.1-Ova1-OVRM10148B09.5

Conread position: 1-172
Cow position: chr29:27259557-27259728 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 5

Conread position: 1-202
Cow position: chr29:26428003-26428200 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 1-215
Cow position: chr29:14313822-14314035 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-221
Cow position: chr29:9639202-9639422 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 5

Conread position: 1-225
Cow position: chr29:19619942-19620164 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-227
Cow position: chr29:34794536-34794761 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 1-228
Cow position: chr29:2463545-2463771 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-228
Cow position: chr29:6934810-6934593 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:45137-45362 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:2838009-2838236 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:6262682-6262909 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:7427815-7428042 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:7811870-7812097 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:14208240-14208460 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:16052030-16052255 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:16101791-16102017 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:16347526-16347306 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:20254491-20254267 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:22949573-22949797 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 5

Conread position: 1-229
Cow position: chr29:23980037-23979811 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:28697052-28697278 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:32543465-32543238 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:38229334-38229107 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:40498549-40498775 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chr29:40954568-40954795 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr29:10452489-10452717 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chr29:10652082-10651854 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 61, 5

Conread position: 1-235
Cow position: chr29:10820388-10820621 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-236
Cow position: chr29:19515018-19515251 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 99, 5

Conread position: 1-236
Cow position: chr29:22279699-22279467 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-238
Cow position: chr29:13099499-13099264 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 5

Conread position: 2-132
Cow position: chr29:960528-960398 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-229
Cow position: chr29:21255278-21255062 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 2-230
Cow position: chr29:6218482-6218707 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 2-231
Cow position: chr29:2307328-2307100 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 64

Conread position: 2-231
Cow position: chr29:27976678-27976906 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 187, 0

Conread position: 2-231
Cow position: chr29:31094258-31094488 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 2-231
Cow position: chr29:35265244-35265015 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-236
Cow position: chr29:2745177-2745404 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 42

Conread position: 3-224
Cow position: chr29:5339766-5339985 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 71

Conread position: 3-229
Cow position: chr29:6871954-6872174 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 84

Conread position: 3-231
Cow position: chr29:6860407-6860632 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 80

Conread position: 5-190
Cow position: chr29:13652391-13652208 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 5-190
Cow position: chr29:34851082-34850897 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 109, 176

Conread position: 5-221
Cow position: chr29:15943676-15943461 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 5-229
Cow position: chr29:17408454-17408232 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 5-229
Cow position: chr29:25479976-25479753 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 44

Conread position: 5-229
Cow position: chr29:39076395-39076618 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 164, 0

Conread position: 5-231
Cow position: chr29:13058062-13057843 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 5-231
Cow position: chr29:19890892-19890666 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 5-231
Cow position: chr29:35955978-35956204 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 62

Conread position: 5-236
Cow position: chr29:7748373-7748602 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 46

Conread position: 6-118
Cow position: chr29:7289873-7289760 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 6-141
Cow position: chr29:24951793-24951658 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-149
Cow position: chr29:16097135-16096992 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-172
Cow position: chr29:32352918-32352754 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 6-174
Cow position: chr29:9939475-9939646 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 43

Conread position: 6-175
Cow position: chr29:11119389-11119558 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position: chr29:35002351-35002520 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 45

Conread position: 6-175
Cow position: chr29:40116627-40116458 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 140
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-183
Cow position: chr29:26262946-26262768 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 6-193
Cow position: chr29:2402011-2401824 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 6-199
Cow position: chr29:18523101-18523286 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 16

Conread position: 6-199
Cow position: chr29:32806392-32806199 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-207
Cow position: chr29:24983244-24983445 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-214
Cow position: chr29:4366482-4366281 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 139, 51

Conread position: 6-214
Cow position: chr29:19657204-19656999 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 160, 0

Conread position: 6-218
Cow position: chr29:1688071-1687859 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-218
Cow position: chr29:5977997-5978207 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 6-218
Cow position: chr29:16185456-16185668 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-221
Cow position: chr29:12797905-12797692 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 6-224
Cow position: chr29:27823445-27823235 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 158, 0

Conread position: 6-229
Cow position: chr29:2886360-2886576 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 6-229
Cow position: chr29:5240719-5240494 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 0

Conread position: 6-229
Cow position: chr29:7701067-7701284 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 105, 0

Conread position: 6-229
Cow position: chr29:21614585-21614370 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 6-229
Cow position: chr29:26161511-26161733 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 6-229
Cow position: chr29:32732424-32732200 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 6-229
Cow position: chr29:32894036-32893814 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 6-229
Cow position: chr29:34331105-34331329 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 176, 0

Conread position: 6-229
Cow position: chr29:34737370-34737593 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 203, 71

Conread position: 6-229
Cow position: chr29:35273716-35273939 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chr29:40157067-40156844 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-230
Cow position: chr29:45651219-45651451 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 186, 72

Conread position: 6-231
Cow position: chr29:607325-607539 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chr29:727052-726827 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:1478774-1478550 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 132, 0

Conread position: 6-231
Cow position: chr29:3329915-3329690 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:4164011-4163786 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:4200701-4200476 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:4864642-4864421 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 114, 0

Conread position: 6-231
Cow position: chr29:7664676-7664902 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 123

Conread position: 6-231
Cow position: chr29:7847715-7847488 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 188, 0

Conread position: 6-231
Cow position: chr29:9079474-9079701 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position: chr29:11365339-11365118 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 207, 43

Conread position: 6-231
Cow position: chr29:13585538-13585314 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 141, 0

Conread position: 6-231
Cow position: chr29:13624051-13624276 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:13849622-13849850 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 33

Conread position: 6-231
Cow position: chr29:14839339-14839118 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 24

Conread position: 6-231
Cow position: chr29:15072158-15072383 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:15699635-15699410 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:15966231-15966456 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:16012854-16013073 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 6-231
Cow position: chr29:16036094-16036319 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:16065033-16064809 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position: chr29:17153560-17153343 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 0

Conread position: 6-231
Cow position: chr29:18010898-18010673 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:19397811-19397585 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 6-231
Cow position: chr29:20999538-20999335 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 73

Conread position: 6-231
Cow position: chr29:21227298-21227074 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 6-231
Cow position: chr29:21429537-21429762 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:21474472-21474247 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:22746223-22745998 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:24577976-24577750 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 6-231
Cow position: chr29:24806778-24806553 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 162, 134

Conread position: 6-231
Cow position: chr29:28657045-28657270 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:29589672-29589893 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 19, 142

Conread position: 6-231
Cow position: chr29:31765363-31765138 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:32291917-32291691 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 188, 0

Conread position: 6-231
Cow position: chr29:32515651-32515426 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:32556421-32556646 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:32962633-32962412 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 14

Conread position: 6-231
Cow position: chr29:35280807-35281017 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chr29:35739378-35739592 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 45

Conread position: 6-231
Cow position: chr29:38409520-38409293 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 6-231
Cow position: chr29:38746371-38746146 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:40294630-40294405 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:40618532-40618752 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 6-231
Cow position: chr29:42255655-42255880 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chr29:42807309-42807089 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 0

Conread position: 6-233
Cow position: chr29:11786325-11786099 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 6-236
Cow position: chr29:13027543-13027315 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 66

Conread position: 6-236
Cow position: chr29:27702400-27702170 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position: chr29:31184699-31184469 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-248
Cow position: chr29:16170223-16170465 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 32

Conread position: 7-212
Cow position: chr29:5961325-5961122 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 7-229
Cow position: chr29:45462555-45462333 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 7-231
Cow position: chr29:10846278-10846054 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 7-231
Cow position: chr29:13129304-13129524 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 32

Conread position: 7-231
Cow position: chr29:15117504-15117728 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 7-231
Cow position: chr29:30432871-30433094 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 60

Conread position: 8-227
Cow position: chr29:21546432-21546652 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 140

Conread position: 8-229
Cow position: chr29:10644093-10644311 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 8-231
Cow position: chr29:45626660-45626440 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 9-231
Cow position: chr29:2484228-2484006 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 9-231
Cow position: chr29:21535602-21535816 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 11-228
Cow position: chr29:27857888-27857673 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 40

Conread position: 11-229
Cow position: chr29:43326832-43326614 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 11-231
Cow position: chr29:15941708-15941928 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 40

Conread position: 12-161
Cow position: chr29:32643886-32643735 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 12-223
Cow position: chr29:10237350-10237561 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-227
Cow position: chr29:32800592-32800378 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 124, 66

Conread position: 12-231
Cow position: chr29:34780669-34780888 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 37, 29

Conread position: 12-231
Cow position: chr29:36209012-36208795 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 12-231
Cow position: chr29:36634032-36634252 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 169, 182

Conread position: 15-229
Cow position: chr29:799374-799588 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 132

Conread position: 17-218
Cow position: chr29:14454535-14454342 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 30

Conread position: 17-229
Cow position: chr29:2103159-2102947 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 17-229
Cow position: chr29:40418366-40418572 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 23

Conread position: 31-231
Cow position: chr29:2430389-2430190 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 153

Conread position: 51-228
Cow position: chr29:649328-649153 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 51-228
Cow position: chr29:7604667-7604492 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 52-229
Cow position: chr29:27310375-27310552 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 120

Conread position: 57-231
Cow position: chr29:17138380-17138206 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 39

Conread position: 62-229
Cow position: chr29:254154-253985 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 65-213
Cow position: chr29:3712246-3712098 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 11

Conread position: 66-212
Cow position: chr29:10159453-10159598 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 66-229
Cow position: chr29:408001-408164 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position: chr29:3584949-3585114 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position: chr29:35227929-35227767 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 69-231
Cow position: chr29:12194608-12194446 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 69-231
Cow position: chr29:21325884-21326043 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 69-236
Cow position: chr29:19525030-19525196 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 70-228
Cow position: chr29:29702143-29702302 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 76-231
Cow position: chr29:34524069-34524224 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 77-228
Cow position: chr29:959848-959698 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 77-231
Cow position: chr29:38350102-38350257 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 108-229
Cow position: chr29:35076184-35076063 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 122-231
Cow position: chr29:43728830-43728721 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.