Cow genome map

Conread name: Ss1.1-Ova1-OVRM10148B09.5

Conread position: 1-125
Cow position: chrX:44019972-44020096 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-135
Cow position: chrX:37118031-37117897 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 126, 5

Conread position: 1-176
Cow position: chrX:32584809-32584982 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1-176
Cow position: chrX:38150810-38150637 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-202
Cow position: chrX:30060009-30059810 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 1-215
Cow position: chrX:45373985-45374198 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 25

Conread position: 1-226
Cow position: chrX:5649278-5649506 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 5

Conread position: 1-226
Cow position: chrX:31201964-31201739 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-227
Cow position: chrX:1550087-1549862 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-227
Cow position: chrX:13406164-13406389 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-227
Cow position: chrX:19211966-19212193 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 1-227
Cow position: chrX:25282372-25282597 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 5

Conread position: 1-228
Cow position: chrX:2479506-2479732 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:323036-322811 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:5354180-5354405 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:7551679-7551906 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:17891669-17891439 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 46

Conread position: 1-229
Cow position: chrX:18193812-18193585 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:18950614-18950841 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:22493153-22492929 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:23038862-23039088 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:23452323-23452552 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 68, 5

Conread position: 1-229
Cow position: chrX:24588612-24588839 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:27318353-27318126 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:29099539-29099314 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:29849501-29849722 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:29916223-29916451 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 5

Conread position: 1-229
Cow position: chrX:30180802-30181029 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:30228991-30229217 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 1-229
Cow position: chrX:30455499-30455721 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:8640910-8640681 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:9899216-9899443 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:18656683-18656912 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:20953655-20953428 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:22811012-22810788 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 5

Conread position: 1-231
Cow position: chrX:22869941-22869712 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:23395729-23395500 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:23572695-23572925 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 5

Conread position: 1-231
Cow position: chrX:24292541-24292773 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 5

Conread position: 1-231
Cow position: chrX:26442129-26442357 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:27977712-27977939 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 5, 0

Conread position: 1-231
Cow position: chrX:41156433-41156205 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 5, 0

Conread position: 1-235
Cow position: chrX:21833006-21832775 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 1-236
Cow position: chrX:21582565-21582331 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 5, 0

Conread position: 1-236
Cow position: chrX:23387416-23387645 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 2-149
Cow position: chrX:2932880-2933027 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-172
Cow position: chrX:29722333-29722163 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 42

Conread position: 2-184
Cow position: chrX:3464954-3465134 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 2-206
Cow position: chrX:30159868-30160069 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 88

Conread position: 2-215
Cow position: chrX:14459057-14459271 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 147

Conread position: 2-227
Cow position: chrX:5248505-5248288 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 2-229
Cow position: chrX:2146095-2145872 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 15

Conread position: 2-229
Cow position: chrX:8104385-8104611 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 27

Conread position: 2-229
Cow position: chrX:13654617-13654389 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 76

Conread position: 2-229
Cow position: chrX:16035386-16035613 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 60, 37

Conread position: 2-229
Cow position: chrX:25847937-25847718 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 2-229
Cow position: chrX:28133219-28132996 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 2-229
Cow position: chrX:29779607-29779819 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 2-229
Cow position: chrX:31804012-31803784 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 29

Conread position: 2-231
Cow position: chrX:5365472-5365701 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 77

Conread position: 2-231
Cow position: chrX:7096579-7096352 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 7, 0

Conread position: 2-231
Cow position: chrX:8590703-8590473 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 85, 0

Conread position: 2-231
Cow position: chrX:9227781-9228009 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 111, 77

Conread position: 2-231
Cow position: chrX:10412854-10413081 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 7

Conread position: 2-231
Cow position: chrX:10528664-10528891 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 0

Conread position: 2-231
Cow position: chrX:16359885-16360114 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-231
Cow position: chrX:20674990-20674761 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-231
Cow position: chrX:21767922-21767693 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-231
Cow position: chrX:23341869-23342098 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 2-231
Cow position: chrX:24346171-24345942 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-231
Cow position: chrX:30164116-30164343 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 2-231
Cow position: chrX:35287548-35287318 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 85

Conread position: 2-231
Cow position: chrX:37815300-37815072 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 155, 74

Conread position: 2-231
Cow position: chrX:41847408-41847636 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 202, 19

Conread position: 2-233
Cow position: chrX:40693611-40693841 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 3-214
Cow position: chrX:40225115-40225324 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 3-221
Cow position: chrX:41791595-41791816 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 3-231
Cow position: chrX:15349091-15349320 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 0

Conread position: 5-224
Cow position: chrX:44193317-44193536 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 5-229
Cow position: chrX:5375158-5375381 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 211, 0

Conread position: 5-229
Cow position: chrX:9095762-9095538 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 5-229
Cow position: chrX:16278775-16278551 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 5-229
Cow position: chrX:22330433-22330655 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 5-229
Cow position: chrX:26755522-26755744 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 5-229
Cow position: chrX:30089923-30090147 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 23

Conread position: 5-231
Cow position: chrX:7277078-7276855 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 5-231
Cow position: chrX:21389697-21389471 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 5-231
Cow position: chrX:21414986-21414760 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 5-231
Cow position: chrX:37404111-37404336 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 0

Conread position: 5-236
Cow position: chrX:2300005-2299783 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 112, 0

Conread position: 6-115
Cow position: chrX:39939635-39939744 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 6-141
Cow position: chrX:28866894-28867032 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 6-156
Cow position: chrX:1056269-1056419 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-158
Cow position: chrX:13206073-13205921 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-159
Cow position: chrX:39559235-39559383 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 6-160
Cow position: chrX:5280734-5280887 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 148, 0

Conread position: 6-162
Cow position: chrX:2649231-2649388 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 33

Conread position: 6-162
Cow position: chrX:13031532-13031688 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-163
Cow position: chrX:38218095-38217941 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 71

Conread position: 6-170
Cow position: chrX:22887780-22887616 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position: chrX:3418018-3418187 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position: chrX:22838390-22838221 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position: chrX:24928224-24928393 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-175
Cow position: chrX:25573470-25573302 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 6-175
Cow position: chrX:27070964-27070796 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 43

Conread position: 6-175
Cow position: chrX:33763263-33763094 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-182
Cow position: chrX:33803877-33804044 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 6-184
Cow position: chrX:39185291-39185113 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 6-184
Cow position: chrX:40184191-40184013 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 41

Conread position: 6-186
Cow position: chrX:28058440-28058260 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-188
Cow position: chrX:9763953-9764135 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-190
Cow position: chrX:29892205-29892018 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 6-192
Cow position: chrX:15175433-15175617 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 6-197
Cow position: chrX:27450931-27451117 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 6-198
Cow position: chrX:12346014-12345822 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 6-199
Cow position: chrX:9261529-9261339 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 6-199
Cow position: chrX:35024183-35023996 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 6-199
Cow position: chrX:36839831-36839639 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 119

Conread position: 6-200
Cow position: chrX:40560422-40560614 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 122, 135

Conread position: 6-201
Cow position: chrX:28588088-28587895 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 6-204
Cow position: chrX:47000536-47000733 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 6-205
Cow position: chrX:14597964-14597765 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-205
Cow position: chrX:29047233-29047034 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-205
Cow position: chrX:29759806-29759609 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 73

Conread position: 6-213
Cow position: chrX:2813364-2813572 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 6-215
Cow position: chrX:22118376-22118585 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-217
Cow position: chrX:3649701-3649915 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 138

Conread position: 6-218
Cow position: chrX:5841432-5841220 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 43

Conread position: 6-218
Cow position: chrX:28503454-28503242 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-221
Cow position: chrX:4407001-4406787 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 6-221
Cow position: chrX:12310271-12310482 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 6-221
Cow position: chrX:46296780-46296565 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-223
Cow position: chrX:24280038-24279820 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 200

Conread position: 6-224
Cow position: chrX:4767814-4767599 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 145, 0

Conread position: 6-224
Cow position: chrX:26760450-26760668 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-225
Cow position: chrX:27983235-27983454 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 52

Conread position: 6-226
Cow position: chrX:671875-672093 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 180, 0

Conread position: 6-227
Cow position: chrX:7484925-7484704 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-227
Cow position: chrX:7809875-7810096 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 71

Conread position: 6-227
Cow position: chrX:17054686-17054465 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-227
Cow position: chrX:20999151-20999371 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 45

Conread position: 6-227
Cow position: chrX:23986368-23986150 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 180, 0

Conread position: 6-227
Cow position: chrX:31379060-31378838 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 46

Conread position: 6-227
Cow position: chrX:34553865-34553653 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 195, 42

Conread position: 6-227
Cow position: chrX:38228199-38228418 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 118, 0

Conread position: 6-227
Cow position: chrX:38998951-38998738 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 6-228
Cow position: chrX:3372734-3372956 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-228
Cow position: chrX:40496463-40496681 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 6-229
Cow position: chrX:2185343-2185125 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 51

Conread position: 6-229
Cow position: chrX:3582053-3581832 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 6-229
Cow position: chrX:6201648-6201428 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 41

Conread position: 6-229
Cow position: chrX:6581053-6580830 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 44

Conread position: 6-229
Cow position: chrX:12307644-12307867 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:14050076-14050298 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 6-229
Cow position: chrX:14801701-14801923 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 6-229
Cow position: chrX:15122043-15122265 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 0

Conread position: 6-229
Cow position: chrX:16525908-16525686 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 190, 0

Conread position: 6-229
Cow position: chrX:16702789-16702566 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:16711074-16710851 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:16854247-16854470 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:20503759-20503538 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 101, 38

Conread position: 6-229
Cow position: chrX:23280142-23279922 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 6-229
Cow position: chrX:24321510-24321733 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:25289561-25289784 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:26531091-26530868 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:28624642-28624859 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 6-229
Cow position: chrX:30053350-30053573 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-229
Cow position: chrX:31728586-31728362 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 6-229
Cow position: chrX:32329327-32329097 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 36

Conread position: 6-229
Cow position: chrX:42732990-42732767 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-230
Cow position: chrX:10445297-10445519 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 186, 0

Conread position: 6-230
Cow position: chrX:16782398-16782180 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 6-230
Cow position: chrX:33537698-33537478 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 6-231
Cow position: chrX:620146-620367 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 6-231
Cow position: chrX:1617116-1617336 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 6-231
Cow position: chrX:2008580-2008803 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 127, 0

Conread position: 6-231
Cow position: chrX:2048230-2048005 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:2103523-2103298 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:2382585-2382359 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 6-231
Cow position: chrX:2559842-2560065 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 145, 0

Conread position: 6-231
Cow position: chrX:3082012-3082240 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 135

Conread position: 6-231
Cow position: chrX:3360939-3360715 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 206, 0

Conread position: 6-231
Cow position: chrX:4342869-4342644 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:4622835-4623060 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:5289566-5289791 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:5320598-5320820 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chrX:5332315-5332538 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 6-231
Cow position: chrX:5334697-5334920 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 6-231
Cow position: chrX:5361128-5360903 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:5646986-5647211 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:5866264-5866039 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:6235733-6235954 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 6-231
Cow position: chrX:6279485-6279712 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 81, 36

Conread position: 6-231
Cow position: chrX:6372298-6372073 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:6406471-6406249 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 6-231
Cow position: chrX:6453815-6453591 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 170, 0

Conread position: 6-231
Cow position: chrX:6655902-6656124 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 6-231
Cow position: chrX:6854600-6854820 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 49, 36

Conread position: 6-231
Cow position: chrX:7120725-7120500 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:7572509-7572284 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:7755024-7754799 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:8435084-8435305 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 0

Conread position: 6-231
Cow position: chrX:8482565-8482341 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 105, 0

Conread position: 6-231
Cow position: chrX:9011449-9011224 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:9128173-9127948 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:9169487-9169712 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:9535661-9535436 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 48, 117

Conread position: 6-231
Cow position: chrX:9642314-9642539 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:10059583-10059359 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 6-231
Cow position: chrX:10438787-10439015 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 73

Conread position: 6-231
Cow position: chrX:10866745-10866963 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 6-231
Cow position: chrX:11146215-11146441 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 0

Conread position: 6-231
Cow position: chrX:11409216-11409441 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:11461877-11462100 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 6-231
Cow position: chrX:11499658-11499881 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 6-231
Cow position: chrX:11744386-11744163 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chrX:11976328-11976552 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 16, 74

Conread position: 6-231
Cow position: chrX:11991039-11991257 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 6-231
Cow position: chrX:12145217-12144992 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:12360006-12359778 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position: chrX:12996792-12997017 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:13178489-13178713 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 6-231
Cow position: chrX:13928624-13928849 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:14125126-14125352 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 209, 0

Conread position: 6-231
Cow position: chrX:14462433-14462214 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 44

Conread position: 6-231
Cow position: chrX:14782227-14782452 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:15260501-15260722 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 108, 0

Conread position: 6-231
Cow position: chrX:15621413-15621638 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:16040561-16040785 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 188, 0

Conread position: 6-231
Cow position: chrX:16046091-16045865 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 188, 0

Conread position: 6-231
Cow position: chrX:16085540-16085765 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:16087005-16087230 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:16325408-16325631 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 163

Conread position: 6-231
Cow position: chrX:16803749-16803973 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 157, 0

Conread position: 6-231
Cow position: chrX:16808696-16808920 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 157, 0

Conread position: 6-231
Cow position: chrX:17663798-17664022 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 152, 76

Conread position: 6-231
Cow position: chrX:17782618-17782393 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:18023874-18024099 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:18222532-18222306 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 111, 24

Conread position: 6-231
Cow position: chrX:18488596-18488821 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:19398896-19398671 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:19474030-19474255 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:19608793-19608569 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 129, 0

Conread position: 6-231
Cow position: chrX:20020697-20020465 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 188, 73

Conread position: 6-231
Cow position: chrX:20741971-20741746 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:20792260-20792035 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 192

Conread position: 6-231
Cow position: chrX:20800907-20800682 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:21685737-21685514 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 179, 0

Conread position: 6-231
Cow position: chrX:21793708-21793483 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:21892626-21892401 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:22077224-22077447 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chrX:22538915-22539141 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 149, 0

Conread position: 6-231
Cow position: chrX:22564564-22564791 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 6-231
Cow position: chrX:22612521-22612296 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:22616253-22616478 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:22819196-22818968 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 201, 160

Conread position: 6-231
Cow position: chrX:23134707-23134490 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 6-231
Cow position: chrX:24109486-24109708 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 6-231
Cow position: chrX:24174834-24175056 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 121, 34

Conread position: 6-231
Cow position: chrX:24316940-24316709 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 139

Conread position: 6-231
Cow position: chrX:24413145-24412920 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:24447072-24446847 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:24462325-24462545 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 6-231
Cow position: chrX:24468005-24468230 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:24483245-24483469 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 52

Conread position: 6-231
Cow position: chrX:24734779-24734557 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 50

Conread position: 6-231
Cow position: chrX:24769738-24769963 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:25451456-25451229 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 115, 179

Conread position: 6-231
Cow position: chrX:26230640-26230865 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:26275257-26275032 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:26508346-26508131 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 22

Conread position: 6-231
Cow position: chrX:26618242-26618017 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:27595108-27595332 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 200, 0

Conread position: 6-231
Cow position: chrX:27615930-27615706 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 181, 73

Conread position: 6-231
Cow position: chrX:27754546-27754321 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:27758827-27758602 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:28557484-28557260 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 0

Conread position: 6-231
Cow position: chrX:28753218-28753443 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:29083185-29082965 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 152, 0

Conread position: 6-231
Cow position: chrX:29170663-29170888 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:29225596-29225371 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:29930274-29930499 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:30165544-30165767 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 159, 0

Conread position: 6-231
Cow position: chrX:30172588-30172812 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 167, 0

Conread position: 6-231
Cow position: chrX:30199874-30200099 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:30435499-30435725 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 0

Conread position: 6-231
Cow position: chrX:30836505-30836280 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:30964868-30965093 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:31261515-31261738 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 113, 125

Conread position: 6-231
Cow position: chrX:31495855-31495630 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:31978723-31978946 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 0

Conread position: 6-231
Cow position: chrX:32064050-32064274 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 118, 0

Conread position: 6-231
Cow position: chrX:32643604-32643379 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:33583812-33583586 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 45

Conread position: 6-231
Cow position: chrX:33685249-33685024 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:34094824-34094599 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:34761184-34760959 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:35532973-35532749 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 132, 0

Conread position: 6-231
Cow position: chrX:35937957-35938172 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 6-231
Cow position: chrX:36195214-36194989 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:36535613-36535836 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 85, 0

Conread position: 6-231
Cow position: chrX:36691951-36691737 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 6-231
Cow position: chrX:36729502-36729277 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:37080400-37080621 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 6-231
Cow position: chrX:37852254-37852031 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 6-231
Cow position: chrX:38231149-38231374 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:38852279-38852056 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 0

Conread position: 6-231
Cow position: chrX:39352500-39352718 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 172, 58

Conread position: 6-231
Cow position: chrX:39548517-39548292 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:39560541-39560767 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 6-231
Cow position: chrX:39713669-39713444 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-231
Cow position: chrX:41885060-41885284 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 6-232
Cow position: chrX:27497947-27497723 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 6-232
Cow position: chrX:28647151-28647378 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 6-233
Cow position: chrX:3155465-3155689 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 6-234
Cow position: chrX:17290298-17290072 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 201, 50

Conread position: 6-235
Cow position: chrX:37488069-37487840 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 6-236
Cow position: chrX:6870446-6870674 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 0

Conread position: 6-236
Cow position: chrX:20356877-20357111 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 6-236
Cow position: chrX:30681386-30681610 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 6-236
Cow position: chrX:38961732-38961962 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 6-238
Cow position: chrX:17994577-17994348 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 34

Conread position: 7-172
Cow position: chrX:29700826-29700989 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 7-218
Cow position: chrX:24309983-24310193 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 34

Conread position: 7-223
Cow position: chrX:730207-730423 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-229
Cow position: chrX:502570-502791 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 189, 0

Conread position: 7-229
Cow position: chrX:4905870-4906092 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 7-229
Cow position: chrX:29908085-29908307 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 7-231
Cow position: chrX:15977836-15978058 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 158, 0

Conread position: 7-231
Cow position: chrX:22579270-22579494 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 7-231
Cow position: chrX:27305046-27304824 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 179, 0

Conread position: 7-231
Cow position: chrX:29912456-29912234 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 7-231
Cow position: chrX:33830157-33829937 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 7-231
Cow position: chrX:39697884-39697661 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 66, 144

Conread position: 8-126
Cow position: chrX:11074067-11074185 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-179
Cow position: chrX:44901257-44901089 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 8-193
Cow position: chrX:4326565-4326749 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 8-193
Cow position: chrX:9911532-9911348 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 8-229
Cow position: chrX:15568762-15568982 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 94, 8

Conread position: 8-229
Cow position: chrX:32145139-32145361 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 209, 0

Conread position: 8-231
Cow position: chrX:2579535-2579314 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 188, 0

Conread position: 8-231
Cow position: chrX:4558436-4558219 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 178, 0

Conread position: 8-231
Cow position: chrX:28518604-28518819 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 157, 0

Conread position: 8-231
Cow position: chrX:43074999-43074772 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 0

Conread position: 9-231
Cow position: chrX:40070488-40070710 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-221
Cow position: chrX:17610341-17610548 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 10-227
Cow position: chrX:23022432-23022215 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 11-189
Cow position: chrX:2500517-2500695 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-228
Cow position: chrX:26622697-26622909 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 11

Conread position: 11-229
Cow position: chrX:8400438-8400649 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 11-231
Cow position: chrX:21343508-21343288 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 11-231
Cow position: chrX:28605972-28606196 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 12-229
Cow position: chrX:17889742-17889956 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 12-229
Cow position: chrX:20953219-20953004 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 5

Conread position: 12-229
Cow position: chrX:21500818-21500610 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 12-229
Cow position: chrX:28633341-28633559 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 39

Conread position: 12-229
Cow position: chrX:39556674-39556893 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 30

Conread position: 12-229
Cow position: chrX:40827993-40828210 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 202

Conread position: 12-231
Cow position: chrX:16465419-16465200 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 12-231
Cow position: chrX:18244103-18243886 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 12-231
Cow position: chrX:21592404-21592186 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 68

Conread position: 12-231
Cow position: chrX:26447204-26446993 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 30

Conread position: 12-232
Cow position: chrX:21818346-21818562 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 30

Conread position: 12-236
Cow position: chrX:27590912-27591135 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 44

Conread position: 16-231
Cow position: chrX:34564219-34564007 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 82

Conread position: 18-215
Cow position: chrX:13430686-13430877 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 18-229
Cow position: chrX:15151557-15151769 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 24

Conread position: 18-231
Cow position: chrX:25817711-25817924 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 23-229
Cow position: chrX:35028366-35028163 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 18

Conread position: 31-231
Cow position: chrX:32129870-32129670 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 33-231
Cow position: chrX:13911854-13912049 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 49-214
Cow position: chrX:21226554-21226389 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 51-230
Cow position: chrX:13415370-13415548 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 51-231
Cow position: chrX:42222696-42222876 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 57-231
Cow position: chrX:12186165-12185992 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 61-229
Cow position: chrX:27628899-27628731 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 10

Conread position: 61-230
Cow position: chrX:29790752-29790922 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 64-231
Cow position: chrX:15590372-15590536 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 66-224
Cow position: chrX:7177773-7177615 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 66-226
Cow position: chrX:15140472-15140632 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 87

Conread position: 66-228
Cow position: chrX:24443997-24444159 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 66-229
Cow position: chrX:865164-865003 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 66-229
Cow position: chrX:11950712-11950875 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 66-229
Cow position: chrX:25292021-25292184 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 66-229
Cow position: chrX:28879523-28879685 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 66-229
Cow position: chrX:29288055-29287893 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 66-231
Cow position: chrX:18463409-18463244 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position: chrX:29482678-29482843 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 66-231
Cow position: chrX:38587856-38588021 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 66-239
Cow position: chrX:34221812-34221647 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 150, 25

Conread position: 69-231
Cow position: chrX:5298185-5298347 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 69-231
Cow position: chrX:37186934-37186775 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 70-231
Cow position: chrX:27029184-27029024 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 73-231
Cow position: chrX:41527749-41527908 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 75-225
Cow position: chrX:47396596-47396740 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 75-231
Cow position: chrX:24260323-24260481 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 75-236
Cow position: chrX:16024120-16023960 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 76-224
Cow position: chrX:37781968-37782113 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 76-231
Cow position: chrX:11457766-11457921 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 76-231
Cow position: chrX:27423223-27423378 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 89-230
Cow position: chrX:9068100-9067959 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 114

Conread position: 91-231
Cow position: chrX:5427124-5426984 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 91-235
Cow position: chrX:45112835-45112693 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 75

Conread position: 94-229
Cow position: chrX:30286436-30286301 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 103-231
Cow position: chrX:43436878-43437006 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 105-231
Cow position: chrX:37840167-37840041 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 106-231
Cow position: chrX:721877-721752 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 121-229
Cow position: chrX:4133911-4134019 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 124-229
Cow position: chrX:39564287-39564391 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.