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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10149B09.5
        

               
Conread position:
               
431-711
               

               
Cow position:
               
chr6:26413438-26413162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
436-706
               

               
Cow position:
               
chr6:7539625-7539358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
437-708
               

               
Cow position:
               
chr6:46860108-46860384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
437-710
               

               
Cow position:
               
chr6:27480015-27479741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
443-676
               

               
Cow position:
               
chr6:52412905-52412669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
443-701
               

               
Cow position:
               
chr6:58732259-58732524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
443-704
               

               
Cow position:
               
chr6:35993628-35993367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
443-710
               

               
Cow position:
               
chr6:38853607-38853877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
443-710
               

               
Cow position:
               
chr6:46465873-46465609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
443-710
               

               
Cow position:
               
chr6:50747042-50746762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
443-710
               

               
Cow position:
               
chr6:51835444-51835181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
443-710
               

               
Cow position:
               
chr6:54430874-54430600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
443-711
               

               
Cow position:
               
chr6:54365284-54365543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
443-712
               

               
Cow position:
               
chr6:5462014-5462269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
444-711
               

               
Cow position:
               
chr6:8206385-8206117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
444-711
               

               
Cow position:
               
chr6:8753260-8753529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
445-710
               

               
Cow position:
               
chr6:58748262-58747991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
446-662
               

               
Cow position:
               
chr6:58363967-58364183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
446-686
               

               
Cow position:
               
chr6:37467501-37467734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
446-696
               

               
Cow position:
               
chr6:20157374-20157120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
447-708
               

               
Cow position:
               
chr6:8966133-8965873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
447-709
               

               
Cow position:
               
chr6:3978621-3978881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
447-710
               

               
Cow position:
               
chr6:51581211-51581478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
447-710
               

               
Cow position:
               
chr6:52478370-52478646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
447-721
               

               
Cow position:
               
chr6:6701229-6701499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
449-655
               

               
Cow position:
               
chr6:44984368-44984162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
449-698
               

               
Cow position:
               
chr6:61137413-61137158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
449-701
               

               
Cow position:
               
chr6:1886628-1886875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
449-708
               

               
Cow position:
               
chr6:14958303-14958565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
449-708
               

               
Cow position:
               
chr6:25773347-25773598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
449-709
               

               
Cow position:
               
chr6:4864509-4864752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
449-710
               

               
Cow position:
               
chr6:67950993-67950740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
449-711
               

               
Cow position:
               
chr6:12338031-12337765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
449-711
               

               
Cow position:
               
chr6:20230788-20231045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
449-711
               

               
Cow position:
               
chr6:37634827-37634570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
449-711
               

               
Cow position:
               
chr6:38614857-38614604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
449-725
               

               
Cow position:
               
chr6:53460529-53460808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
451-710
               

               
Cow position:
               
chr6:19681488-19681739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
451-710
               

               
Cow position:
               
chr6:40032228-40031975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
452-710
               

               
Cow position:
               
chr6:54132846-54132599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr6:6400986-6400745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
456-711
               

               
Cow position:
               
chr6:611583-611341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
456-711
               

               
Cow position:
               
chr6:60456861-60456610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
95, 59
               

               
Conread position:
               
456-712
               

               
Cow position:
               
chr6:37199495-37199770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
457-711
               

               
Cow position:
               
chr6:36470531-36470783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
458-706
               

               
Cow position:
               
chr6:30285722-30285476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
458-711
               

               
Cow position:
               
chr6:1022809-1022557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
459-694
               

               
Cow position:
               
chr6:48425287-48425524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 151
               

               
Conread position:
               
459-710
               

               
Cow position:
               
chr6:31535540-31535789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
464-710
               

               
Cow position:
               
chr6:18447482-18447727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
465-706
               

               
Cow position:
               
chr6:60350273-60350514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
465-710
               

               
Cow position:
               
chr6:7103200-7103454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 246
               

               
Conread position:
               
466-688
               

               
Cow position:
               
chr6:63720221-63720002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 139
               

               
Conread position:
               
466-699
               

               
Cow position:
               
chr6:21231550-21231329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
467-710
               

               
Cow position:
               
chr6:35181236-35181472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
467-717
               

               
Cow position:
               
chr6:16411215-16410970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
468-705
               

               
Cow position:
               
chr6:59620692-59620455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
468-708
               

               
Cow position:
               
chr6:38207473-38207712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
468-710
               

               
Cow position:
               
chr6:7824788-7824544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
468-710
               

               
Cow position:
               
chr6:55935961-55936195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
469-653
               

               
Cow position:
               
chr6:12542911-12543095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
469-697
               

               
Cow position:
               
chr6:38641516-38641292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
469-710
               

               
Cow position:
               
chr6:15242853-15242617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
469-710
               

               
Cow position:
               
chr6:56850032-56849799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
469-710
               

               
Cow position:
               
chr6:65871052-65870805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
469-711
               

               
Cow position:
               
chr6:24902119-24902361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
469-711
               

               
Cow position:
               
chr6:63047597-63047356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 13
               

               
Conread position:
               
470-710
               

               
Cow position:
               
chr6:29077749-29077510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
470-710
               

               
Cow position:
               
chr6:58173204-58172966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
470-711
               

               
Cow position:
               
chr6:60930879-60931120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
471-634
               

               
Cow position:
               
chr6:17313753-17313587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
471-710
               

               
Cow position:
               
chr6:31526063-31525830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
471-710
               

               
Cow position:
               
chr6:48282011-48281776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
471-710
               

               
Cow position:
               
chr6:53178655-53178421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
472-690
               

               
Cow position:
               
chr6:8788019-8788236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
472-702
               

               
Cow position:
               
chr6:53138902-53139140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
472-709
               

               
Cow position:
               
chr6:47540550-47540308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
472-710
               

               
Cow position:
               
chr6:13687799-13688030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
472-710
               

               
Cow position:
               
chr6:23247944-23248182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
472-710
               

               
Cow position:
               
chr6:53711133-53710899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
472-714
               

               
Cow position:
               
chr6:63272593-63272836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
472-721
               

               
Cow position:
               
chr6:49685603-49685354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
473-700
               

               
Cow position:
               
chr6:457196-456977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 77
               

               
Conread position:
               
476-676
               

               
Cow position:
               
chr6:53519607-53519808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
476-690
               

               
Cow position:
               
chr6:33277057-33276840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
476-696
               

               
Cow position:
               
chr6:445337-445106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
476-709
               

               
Cow position:
               
chr6:8804515-8804745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
476-710
               

               
Cow position:
               
chr6:5958010-5958235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
476-710
               

               
Cow position:
               
chr6:41733640-41733408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
476-711
               

               
Cow position:
               
chr6:607275-607042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
477-694
               

               
Cow position:
               
chr6:66131321-66131105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
477-697
               

               
Cow position:
               
chr6:6098269-6098488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
477-698
               

               
Cow position:
               
chr6:19695824-19695600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 132
               

               
Conread position:
               
477-710
               

               
Cow position:
               
chr6:53401367-53401150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
477-711
               

               
Cow position:
               
chr6:8637289-8637055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
477-721
               

               
Cow position:
               
chr6:52025638-52025886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
477-722
               

               
Cow position:
               
chr6:15937838-15938080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
478-710
               

               
Cow position:
               
chr6:58076243-58076006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
478-711
               

               
Cow position:
               
chr6:10176283-10176521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
482-708
               

               
Cow position:
               
chr6:2013027-2012802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
483-699
               

               
Cow position:
               
chr6:54864662-54864874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
483-716
               

               
Cow position:
               
chr6:39994455-39994686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
484-647
               

               
Cow position:
               
chr6:60740023-60739859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
484-686
               

               
Cow position:
               
chr6:53731529-53731326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
484-702
               

               
Cow position:
               
chr6:23532661-23532452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 41
               

               
Conread position:
               
484-703
               

               
Cow position:
               
chr6:59069619-59069840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
484-706
               

               
Cow position:
               
chr6:34475548-34475758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
484-707
               

               
Cow position:
               
chr6:52248124-52248349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
19, 201
               

               
Conread position:
               
484-708
               

               
Cow position:
               
chr6:26728519-26728743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
484-708
               

               
Cow position:
               
chr6:48344339-48344111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
484-710
               

               
Cow position:
               
chr6:130156-130383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 200
               

               
Conread position:
               
484-710
               

               
Cow position:
               
chr6:16700272-16700040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
484-710
               

               
Cow position:
               
chr6:32121912-32121692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
484-710
               

               
Cow position:
               
chr6:54294115-54293892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
484-710
               

               
Cow position:
               
chr6:54867521-54867292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
484-710
               

               
Cow position:
               
chr6:61631601-61631838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr6:1907548-1907319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr6:10695874-10695649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr6:19427461-19427229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr6:42565696-42565466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr6:45160287-45160511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
484-711
               

               
Cow position:
               
chr6:57686160-57685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
484-717
               

               
Cow position:
               
chr6:24468384-24468618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
484-721
               

               
Cow position:
               
chr6:37149195-37148966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 109
               

               
Conread position:
               
484-749
               

               
Cow position:
               
chr6:56041618-56041881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
486-710
               

               
Cow position:
               
chr6:25359075-25358858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
486-711
               

               
Cow position:
               
chr6:35990230-35990442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
487-686
               

               
Cow position:
               
chr6:47305342-47305144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
487-699
               

               
Cow position:
               
chr6:12630030-12629817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
487-700
               

               
Cow position:
               
chr6:57680426-57680644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
487-701
               

               
Cow position:
               
chr6:44377273-44377056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
487-706
               

               
Cow position:
               
chr6:17997312-17997530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
487-706
               

               
Cow position:
               
chr6:61130472-61130697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
487-708
               

               
Cow position:
               
chr6:5609442-5609657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
487-708
               

               
Cow position:
               
chr6:6343432-6343209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
487-708
               

               
Cow position:
               
chr6:64431939-64431722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
487-709
               

               
Cow position:
               
chr6:242814-242596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
487-710
               

               
Cow position:
               
chr6:12500862-12500641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
487-710
               

               
Cow position:
               
chr6:21542324-21542101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
487-710
               

               
Cow position:
               
chr6:34076031-34075805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
487-710
               

               
Cow position:
               
chr6:44078521-44078303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 108
               

               
Conread position:
               
487-710
               

               
Cow position:
               
chr6:61515187-61515416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
487-711
               

               
Cow position:
               
chr6:5095543-5095770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 124
               

               
Conread position:
               
487-711
               

               
Cow position:
               
chr6:50445756-50445979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
487-715
               

               
Cow position:
               
chr6:7190115-7190343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
487-721
               

               
Cow position:
               
chr6:28977040-28977262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
487-721
               

               
Cow position:
               
chr6:54490731-54490971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 108
               

               
Conread position:
               
487-721
               

               
Cow position:
               
chr6:67304807-67304571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
487-721
               

               
Cow position:
               
chr6:67968609-67968856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
487-731
               

               
Cow position:
               
chr6:15922995-15923237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
488-686
               

               
Cow position:
               
chr6:416103-415901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 196
               

               
Conread position:
               
488-708
               

               
Cow position:
               
chr6:60442421-60442202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
488-710
               

               
Cow position:
               
chr6:33302414-33302191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
488-711
               

               
Cow position:
               
chr6:32126065-32125847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
488-711
               

               
Cow position:
               
chr6:32867211-32867426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
488-712
               

               
Cow position:
               
chr6:899288-899505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
488-716
               

               
Cow position:
               
chr6:14949477-14949706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
489-704
               

               
Cow position:
               
chr6:62924994-62925208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
489-711
               

               
Cow position:
               
chr6:27851705-27851924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
490-665
               

               
Cow position:
               
chr6:60819517-60819341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
490-681
               

               
Cow position:
               
chr6:8187518-8187709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
490-703
               

               
Cow position:
               
chr6:24515196-24515405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
490-704
               

               
Cow position:
               
chr6:62324995-62324777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
490-706
               

               
Cow position:
               
chr6:14201702-14201483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
490-706
               

               
Cow position:
               
chr6:30786154-30786363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
490-708
               

               
Cow position:
               
chr6:32210628-32210843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
490-708
               

               
Cow position:
               
chr6:54368900-54369116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
490-709
               

               
Cow position:
               
chr6:6060568-6060775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
490-710
               

               
Cow position:
               
chr6:2607616-2607394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
490-710
               

               
Cow position:
               
chr6:4383486-4383274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
490-710
               

               
Cow position:
               
chr6:12928120-12927901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
490-710
               

               
Cow position:
               
chr6:14696370-14696591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
490-710
               

               
Cow position:
               
chr6:17557383-17557156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 206
               

               
Conread position:
               
490-710
               

               
Cow position:
               
chr6:40264199-40264416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
490-711
               

               
Cow position:
               
chr6:9008610-9008831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
490-711
               

               
Cow position:
               
chr6:26915331-26915110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
490-711
               

               
Cow position:
               
chr6:61575610-61575384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 187
               

               
Conread position:
               
490-717
               

               
Cow position:
               
chr6:12623465-12623245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
490-717
               

               
Cow position:
               
chr6:68049433-68049210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
490-721
               

               
Cow position:
               
chr6:30826031-30826265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 149
               

               
Conread position:
               
490-721
               

               
Cow position:
               
chr6:31564338-31564564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
491-710
               

               
Cow position:
               
chr6:642565-642796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
491-710
               

               
Cow position:
               
chr6:54647521-54647741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 138
               

               
Conread position:
               
491-722
               

               
Cow position:
               
chr6:17090599-17090369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 185
               

               
Conread position:
               
492-706
               

               
Cow position:
               
chr6:66453798-66453586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
492-710
               

               
Cow position:
               
chr6:21004669-21004437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
492-710
               

               
Cow position:
               
chr6:24327142-24327354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
492-721
               

               
Cow position:
               
chr6:38441175-38440951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
493-710
               

               
Cow position:
               
chr6:16738018-16737802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
493-710
               

               
Cow position:
               
chr6:32915926-32916139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
493-710
               

               
Cow position:
               
chr6:34196152-34196367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 111
               

               
Conread position:
               
493-721
               

               
Cow position:
               
chr6:38218667-38218441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
494-711
               

               
Cow position:
               
chr6:19401853-19401642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
494-715
               

               
Cow position:
               
chr6:65702405-65702626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
494-717
               

               
Cow position:
               
chr6:10332093-10332322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
494-717
               

               
Cow position:
               
chr6:60474127-60473908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
495-710
               

               
Cow position:
               
chr6:65862683-65862467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
498-702
               

               
Cow position:
               
chr6:58439954-58439756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
498-710
               

               
Cow position:
               
chr6:1770205-1770414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
498-710
               

               
Cow position:
               
chr6:21587424-21587640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 27
               

               
Conread position:
               
498-710
               

               
Cow position:
               
chr6:54884917-54885132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
498-711
               

               
Cow position:
               
chr6:25407397-25407616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
500-689
               

               
Cow position:
               
chr6:46634245-46634054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
502-710
               

               
Cow position:
               
chr6:18988201-18987998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
505-706
               

               
Cow position:
               
chr6:55366334-55366538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
505-710
               

               
Cow position:
               
chr6:41823840-41824047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
507-686
               

               
Cow position:
               
chr6:33917869-33918046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
507-710
               

               
Cow position:
               
chr6:20605917-20605715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
507-717
               

               
Cow position:
               
chr6:61113738-61113524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
507-729
               

               
Cow position:
               
chr6:28477159-28476945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
508-675
               

               
Cow position:
               
chr6:1703798-1703630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
508-686
               

               
Cow position:
               
chr6:21456708-21456885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 104
               

               
Conread position:
               
508-703
               

               
Cow position:
               
chr6:47426-47622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 182
               

               
Conread position:
               
508-707
               

               
Cow position:
               
chr6:3374587-3374785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
508-708
               

               
Cow position:
               
chr6:6460523-6460325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 175
               

               
Conread position:
               
508-708
               

               
Cow position:
               
chr6:21110945-21110752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
508-708
               

               
Cow position:
               
chr6:28483000-28482798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
508-708
               

               
Cow position:
               
chr6:28811015-28811211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
508-708
               

               
Cow position:
               
chr6:32421120-32420918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:389150-388952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:1538780-1538577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 176
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:1783797-1783991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:3952498-3952306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:6181591-6181795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:7694368-7694572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 142
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:8562700-8562497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:21311768-21311977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:35471539-35471745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:40713520-40713718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 84
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:42961381-42961586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:44099067-44098866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:46865609-46865818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:50119806-50120006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:50572592-50572388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:55904218-55904014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:60859318-60859525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:65676234-65676038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:65711804-65711608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:66363263-66363463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
508-710
               

               
Cow position:
               
chr6:66566440-66566237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 182
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:1816884-1817085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:3622098-3621893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:15275106-15275311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:16594062-16593857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:36196192-36195994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:53345777-53345576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:58032105-58031900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr6:60877430-60877225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 25
               

               
Conread position:
               
508-717
               

               
Cow position:
               
chr6:27110574-27110365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
45, 177
               

               
Conread position:
               
508-717
               

               
Cow position:
               
chr6:40549566-40549777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 108
               

               
Conread position:
               
508-736
               

               
Cow position:
               
chr6:57384502-57384274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
508-767
               

               
Cow position:
               
chr6:48572903-48573161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
509-709
               

               
Cow position:
               
chr6:19508461-19508648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
509-710
               

               
Cow position:
               
chr6:3929297-3929102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
510-709
               

               
Cow position:
               
chr6:18080529-18080732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
511-709
               

               
Cow position:
               
chr6:54981086-54980884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
511-710
               

               
Cow position:
               
chr6:20097987-20098183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
511-711
               

               
Cow position:
               
chr6:10605665-10605465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
512-708
               

               
Cow position:
               
chr6:45690614-45690810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
514-692
               

               
Cow position:
               
chr6:46245343-46245524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
514-701
               

               
Cow position:
               
chr6:46667086-46666894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
514-711
               

               
Cow position:
               
chr6:9375394-9375594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
514-716
               

               
Cow position:
               
chr6:16746317-16746115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
515-699
               

               
Cow position:
               
chr6:7989436-7989621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
40, 151
               

               
Conread position:
               
515-721
               

               
Cow position:
               
chr6:10106018-10106227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
516-706
               

               
Cow position:
               
chr6:49398642-49398831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
516-709
               

               
Cow position:
               
chr6:9323134-9322941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
516-710
               

               
Cow position:
               
chr6:24074589-24074785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
516-710
               

               
Cow position:
               
chr6:39358372-39358559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
516-710
               

               
Cow position:
               
chr6:43789248-43789445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
517-703
               

               
Cow position:
               
chr6:2896725-2896539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
517-705
               

               
Cow position:
               
chr6:59015587-59015776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
517-708
               

               
Cow position:
               
chr6:50090617-50090423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
517-710
               

               
Cow position:
               
chr6:21535027-21534840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
517-710
               

               
Cow position:
               
chr6:55607841-55608025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
517-710
               

               
Cow position:
               
chr6:69500295-69500111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
517-711
               

               
Cow position:
               
chr6:45617465-45617660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
517-717
               

               
Cow position:
               
chr6:24031351-24031149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
517-717
               

               
Cow position:
               
chr6:44194571-44194771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
517-718
               

               
Cow position:
               
chr6:53652013-53651814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
519-667
               

               
Cow position:
               
chr6:37783389-37783238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
519-701
               

               
Cow position:
               
chr6:54701513-54701330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
520-721
               

               
Cow position:
               
chr6:66433914-66433717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
523-707
               

               
Cow position:
               
chr6:42931140-42931327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
524-707
               

               
Cow position:
               
chr6:52562203-52562390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
525-710
               

               
Cow position:
               
chr6:8209628-8209808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
525-711
               

               
Cow position:
               
chr6:59301857-59302044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
30, 182
               

               
Conread position:
               
526-709
               

               
Cow position:
               
chr6:3719043-3719226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
528-708
               

               
Cow position:
               
chr6:28559384-28559198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
528-741
               

               
Cow position:
               
chr6:36202788-36202577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
529-710
               

               
Cow position:
               
chr6:34235475-34235652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
531-695
               

               
Cow position:
               
chr6:51463654-51463820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
531-704
               

               
Cow position:
               
chr6:54140767-54140601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
531-708
               

               
Cow position:
               
chr6:5673194-5673012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
531-711
               

               
Cow position:
               
chr6:61978217-61978401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
532-711
               

               
Cow position:
               
chr6:21230927-21230746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
533-675
               

               
Cow position:
               
chr6:37603478-37603339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
533-710
               

               
Cow position:
               
chr6:12845267-12845098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
533-710
               

               
Cow position:
               
chr6:16706958-16706788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
533-710
               

               
Cow position:
               
chr6:17067863-17068038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
538-710
               

               
Cow position:
               
chr6:51398752-51398582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
541-695
               

               
Cow position:
               
chr6:88957-89113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
545-712
               

               
Cow position:
               
chr6:21184901-21184735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
553-716
               

               
Cow position:
               
chr6:35613480-35613634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
555-711
               

               
Cow position:
               
chr6:47150711-47150559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
559-707
               

               
Cow position:
               
chr6:12739510-12739365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
560-698
               

               
Cow position:
               
chr6:31260918-31260780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
560-710
               

               
Cow position:
               
chr6:11830099-11829947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
560-710
               

               
Cow position:
               
chr6:54807154-54807004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
560-710
               

               
Cow position:
               
chr6:62486000-62486148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
560-711
               

               
Cow position:
               
chr6:7253495-7253646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
560-711
               

               
Cow position:
               
chr6:13741622-13741476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
565-721
               

               
Cow position:
               
chr6:6117628-6117780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
568-710
               

               
Cow position:
               
chr6:7801446-7801584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
570-710
               

               
Cow position:
               
chr6:32024420-32024557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
572-721
               

               
Cow position:
               
chr6:65846527-65846678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
579-711
               

               
Cow position:
               
chr6:68272216-68272349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
764-919
               

               
Cow position:
               
chr6:59069674-59069829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
764-922
               

               
Cow position:
               
chr6:88954-89113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
764-922
               

               
Cow position:
               
chr6:8966041-8965886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
764-923
               

               
Cow position:
               
chr6:52248181-52248338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
764-923
               

               
Cow position:
               
chr6:54430776-54430614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:2012969-2012813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:13040407-13040246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:14958395-14958555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:23248009-23248169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:36196164-36196008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:44194592-44194751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:53460622-53460777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
764-924
               

               
Cow position:
               
chr6:61575559-61575398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 136
               

               
Conread position:
               
766-922
               

               
Cow position:
               
chr6:51463663-51463820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
767-903
               

               
Cow position:
               
chr6:8187566-8187704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
767-911
               

               
Cow position:
               
chr6:607214-607069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
767-911
               

               
Cow position:
               
chr6:53519676-53519816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
767-913
               

               
Cow position:
               
chr6:53138974-53139123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 142
               

               
Conread position:
               
767-920
               

               
Cow position:
               
chr6:1886716-1886865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
767-921
               

               
Cow position:
               
chr6:51398749-51398598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
767-923
               

               
Cow position:
               
chr6:130214-130369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:389117-388965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:1783830-1783978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:5958073-5958222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:6343374-6343220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:7694401-7694559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:7989462-7989619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:9008664-9008817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:12500809-12500654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:14949531-14949687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:20605883-20605728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:24781609-24781769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 152
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:28482967-28482809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:38207544-38207701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:38641441-38641292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:40032140-40031988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:42565636-42565480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:46667059-46666898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:47540479-47540320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:54368951-54369105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:59301873-59302031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:61137321-61137159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
129, 14
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:61631661-61631825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:67214692-67214536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
767-924
               

               
Cow position:
               
chr6:68049384-68049230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
768-913
               

               
Cow position:
               
chr6:47305286-47305144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
768-921
               

               
Cow position:
               
chr6:63272662-63272816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
768-924
               

               
Cow position:
               
chr6:6098338-6098488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr6:2607558-2607409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr6:60859356-60859510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr6:65676204-65676053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
771-922
               

               
Cow position:
               
chr6:65711774-65711623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:2896699-2896545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:10332147-10332302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:12337930-12337779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:21184901-21184750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:24902195-24902347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:38853711-38853864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 14
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:39994514-39994667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:50746930-50746775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 106
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:60350352-60350505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:61113700-61113544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
771-924
               

               
Cow position:
               
chr6:65862635-65862480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
772-923
               

               
Cow position:
               
chr6:15242778-15242629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
772-924
               

               
Cow position:
               
chr6:10106049-10106202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
773-912
               

               
Cow position:
               
chr6:2547187-2547047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
773-924
               

               
Cow position:
               
chr6:3719061-3719214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
773-924
               

               
Cow position:
               
chr6:6460484-6460336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
773-924
               

               
Cow position:
               
chr6:20329966-20329815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
773-924
               

               
Cow position:
               
chr6:35181316-35181459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
773-924
               

               
Cow position:
               
chr6:44377209-44377060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
774-924
               

               
Cow position:
               
chr6:31535627-31535776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
786-920
               

               
Cow position:
               
chr6:54807155-54807021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
786-923
               

               
Cow position:
               
chr6:445243-445106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:9375442-9375580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:10176373-10176507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:11830100-11829960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:13741623-13741490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:21311826-21311964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:31260919-31260781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:42961435-42961573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
786-924
               

               
Cow position:
               
chr6:67304733-67304596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
787-924
               

               
Cow position:
               
chr6:7824691-7824557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
787-924
               

               
Cow position:
               
chr6:21587490-21587627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
788-924
               

               
Cow position:
               
chr6:642647-642783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
788-924
               

               
Cow position:
               
chr6:48344258-48344122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
788-924
               

               
Cow position:
               
chr6:58439897-58439762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
789-924
               

               
Cow position:
               
chr6:24962074-24961939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
790-924
               

               
Cow position:
               
chr6:16491994-16492126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
797-924
               

               
Cow position:
               
chr6:32024420-32024544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               
Show alignments to all cow chromosomes.