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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10161A11.5
        

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:18172408-18172196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 198
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:20706136-20706345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 165
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:55316119-55316341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr13:18696913-18696696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 170
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr13:20679409-20679196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr13:24230279-24230034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
191, 57
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr13:23479097-23478846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr13:34263299-34263567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr13:20155069-20154809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr13:36877121-36876867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr13:971823-972096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
47, 130
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr13:24586113-24585849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:12207113-12206861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 56
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:15192820-15193088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 112
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:15757190-15756916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:18852150-18851888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:19279166-19278895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:20217323-20217598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:21135830-21136112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:27525195-27525459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:35659823-35659554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:61976895-61977158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
179, 47
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr13:14576276-14576000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr13:21288016-21288299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:1155634-1155926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:12670376-12670668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:19022345-19022048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr13:20288400-20288122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
196, 47
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:17292063-17292345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 115
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:17821198-17821474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 196
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:18058176-18058464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:24715313-24715032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 200
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:41806845-41806560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
42, 245
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:49796086-49795821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
196, 45
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr13:8374702-8374982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:13196311-13196021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 231
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:18166803-18166511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr13:38329696-38329394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr13:43480127-43479842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr13:46329534-46329826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 255
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr13:19882966-19883255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:13089097-13088810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:17089454-17089739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:21235616-21235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
196, 47
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr13:55674139-55674434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 283
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:15194662-15194945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 188
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:34281746-34281456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:45023142-45023447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:49503461-49503762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:52477576-52477871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:54582946-54582648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr13:22085674-22085956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 187
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr13:20473612-20473903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 198
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr13:24753950-24753662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
264, 20
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr13:5671521-5671814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr13:5758271-5758571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 198
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:40722638-40722923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr13:17569030-17569329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr13:13261074-13260755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:6079349-6079650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr13:12974873-12974560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
188, 40
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr13:13338927-13338593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:14063449-14063795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 317
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr13:53574039-53573792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr13:13320863-13320598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:34261299-34261035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr13:54702256-54701981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 250
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr13:35526135-35526411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr13:25817597-25817311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr13:17745314-17745030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr13:54128524-54128824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 153
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr13:6189541-6189835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr13:15903090-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr13:20666317-20666567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr13:20784662-20784394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr13:26698430-26698697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr13:48165356-48165623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
3-279
               

               
Cow position:
               
chr13:42200687-42200404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr13:54388951-54389243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 254
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr13:11808629-11808354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
192, 19
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr13:12045267-12045577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr13:17021661-17021953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr13:49022800-49023095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr13:15288856-15289143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr13:24369648-24369373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr13:20534958-20534665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr13:57769944-57770183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
191, 41
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr13:17114314-17114597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
9-286
               

               
Cow position:
               
chr13:20314557-20314849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr13:18197546-18197837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
11-210
               

               
Cow position:
               
chr13:15460715-15460919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chr13:29831383-29831627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 31
               

               
Conread position:
               
17-288
               

               
Cow position:
               
chr13:21170583-21170305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 241
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr13:19007986-19007711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
23-210
               

               
Cow position:
               
chr13:23856260-23856068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
23-263
               

               
Cow position:
               
chr13:15257321-15257567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
23-280
               

               
Cow position:
               
chr13:46525388-46525645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
23-281
               

               
Cow position:
               
chr13:23667302-23667036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
23-289
               

               
Cow position:
               
chr13:25504581-25504309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 186
               

               
Conread position:
               
23-293
               

               
Cow position:
               
chr13:21171524-21171800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 249
               

               
Conread position:
               
23-297
               

               
Cow position:
               
chr13:17611502-17611784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
19, 251
               

               
Conread position:
               
23-303
               

               
Cow position:
               
chr13:152008-151730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 169
               

               
Conread position:
               
23-341
               

               
Cow position:
               
chr13:21242036-21242358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 176
               

               
Conread position:
               
25-261
               

               
Cow position:
               
chr13:16038247-16038481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 23
               

               
Conread position:
               
26-295
               

               
Cow position:
               
chr13:37775166-37775441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
28-287
               

               
Cow position:
               
chr13:7265078-7265330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr13:45439558-45439297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
37-280
               

               
Cow position:
               
chr13:56535486-56535250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
40-263
               

               
Cow position:
               
chr13:19393319-19393096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
42-280
               

               
Cow position:
               
chr13:6974186-6973945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 119
               

               
Conread position:
               
42-289
               

               
Cow position:
               
chr13:38283953-38284206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
106, 117
               

               
Conread position:
               
43-262
               

               
Cow position:
               
chr13:15083682-15083462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 13
               

               
Conread position:
               
44-286
               

               
Cow position:
               
chr13:47243532-47243774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
44-287
               

               
Cow position:
               
chr13:52055568-52055816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 188
               

               
Conread position:
               
44-289
               

               
Cow position:
               
chr13:5263257-5263503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
45-263
               

               
Cow position:
               
chr13:55494505-55494719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
45-296
               

               
Cow position:
               
chr13:57985916-57986164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
47-263
               

               
Cow position:
               
chr13:11260286-11260077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
162, 42
               

               
Conread position:
               
47-264
               

               
Cow position:
               
chr13:58763598-58763810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
49-263
               

               
Cow position:
               
chr13:35557093-35557311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
51-264
               

               
Cow position:
               
chr13:14645067-14644852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
51-278
               

               
Cow position:
               
chr13:55765162-55765390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr13:38035850-38035623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 69
               

               
Conread position:
               
52-279
               

               
Cow position:
               
chr13:62008122-62007891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr13:11933588-11933832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
52-291
               

               
Cow position:
               
chr13:21980961-21981199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
52-298
               

               
Cow position:
               
chr13:15997049-15996796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
98, 111
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr13:1462282-1462529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
53-293
               

               
Cow position:
               
chr13:620241-620479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
53-297
               

               
Cow position:
               
chr13:14927274-14927031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
56-280
               

               
Cow position:
               
chr13:37614180-37614415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
57-273
               

               
Cow position:
               
chr13:7104664-7104446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
58-315
               

               
Cow position:
               
chr13:33974742-33974498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
69-279
               

               
Cow position:
               
chr13:8450328-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
71-262
               

               
Cow position:
               
chr13:38012328-38012140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
71-263
               

               
Cow position:
               
chr13:6980916-6980725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
81-302
               

               
Cow position:
               
chr13:33854698-33854921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 163
               

               
Conread position:
               
85-293
               

               
Cow position:
               
chr13:21277485-21277686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
204, 119
               

               
Conread position:
               
88-262
               

               
Cow position:
               
chr13:52913852-52913677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
88-280
               

               
Cow position:
               
chr13:16790188-16789993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
88-300
               

               
Cow position:
               
chr13:31507465-31507683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
88-325
               

               
Cow position:
               
chr13:37554895-37555133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
109-263
               

               
Cow position:
               
chr13:55775318-55775165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr13:43342522-43342341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
117-287
               

               
Cow position:
               
chr13:6951529-6951353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 133
               

               
Conread position:
               
117-291
               

               
Cow position:
               
chr13:23823084-23823258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
122-290
               

               
Cow position:
               
chr13:23478847-23478673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
440-888
               

               
Cow position:
               
chr13:5627941-5627495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
452-885
               

               
Cow position:
               
chr13:29517908-29518341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
467-800
               

               
Cow position:
               
chr13:17998478-17998823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
467-825
               

               
Cow position:
               
chr13:23002087-23001720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
467-833
               

               
Cow position:
               
chr13:31729974-31729592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
162, 76
               

               
Conread position:
               
467-844
               

               
Cow position:
               
chr13:34049663-34050038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
467-880
               

               
Cow position:
               
chr13:31732968-31732550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr13:678670-679099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr13:13325850-13326273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr13:17309389-17309811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr13:21697173-21697612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 167
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr13:28860084-28860512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
121, 111
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr13:49974585-49975014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr13:14402176-14401756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 98
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr13:34041417-34040982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 98
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr13:22184426-22183987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr13:30239238-30239681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr13:31555821-31555399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
469-774
               

               
Cow position:
               
chr13:21908171-21907884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
469-882
               

               
Cow position:
               
chr13:12734000-12733583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
161, 7
               

               
Conread position:
               
469-882
               

               
Cow position:
               
chr13:21839271-21838859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 113
               

               
Conread position:
               
469-888
               

               
Cow position:
               
chr13:14177921-14177501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
470-887
               

               
Cow position:
               
chr13:15450196-15449793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
159, 73
               

               
Conread position:
               
473-886
               

               
Cow position:
               
chr13:11797792-11797355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
473-887
               

               
Cow position:
               
chr13:11794131-11793725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
205, 70
               

               
Conread position:
               
473-887
               

               
Cow position:
               
chr13:50661228-50661628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
473-888
               

               
Cow position:
               
chr13:43590257-43590671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
156, 61
               

               
Conread position:
               
473-888
               

               
Cow position:
               
chr13:44652892-44652496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
476-792
               

               
Cow position:
               
chr13:57823758-57823443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
476-821
               

               
Cow position:
               
chr13:15923452-15923091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
151, 84
               

               
Conread position:
               
476-844
               

               
Cow position:
               
chr13:32546320-32546691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
89, 164
               

               
Conread position:
               
476-857
               

               
Cow position:
               
chr13:5625057-5624665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
162, 57
               

               
Conread position:
               
476-871
               

               
Cow position:
               
chr13:4484725-4485129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
476-875
               

               
Cow position:
               
chr13:13900798-13901208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
476-880
               

               
Cow position:
               
chr13:4942313-4942731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:3653389-3652961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 391
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:9045696-9046111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 67
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:15543471-15543892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:31611380-31610959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 98
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:32924194-32923783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
122, 91
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:34324625-34324226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
262, 64
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:34342835-34343258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
84, 138
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr13:35758213-35758633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
144, 31
               

               
Conread position:
               
476-887
               

               
Cow position:
               
chr13:25692607-25693027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
476-888
               

               
Cow position:
               
chr13:6667202-6666785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
476-888
               

               
Cow position:
               
chr13:34030551-34030951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
476-888
               

               
Cow position:
               
chr13:48358571-48358982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
477-886
               

               
Cow position:
               
chr13:31507846-31508259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
133, 75
               

               
Conread position:
               
478-886
               

               
Cow position:
               
chr13:32984411-32983992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
478-888
               

               
Cow position:
               
chr13:34938383-34938792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
498-882
               

               
Cow position:
               
chr13:6358074-6358472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
503-802
               

               
Cow position:
               
chr13:15519564-15519266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
509-887
               

               
Cow position:
               
chr13:26777102-26777471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
541-882
               

               
Cow position:
               
chr13:16253526-16253163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
549-880
               

               
Cow position:
               
chr13:60699572-60699246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
550-813
               

               
Cow position:
               
chr13:30654401-30654106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
550-886
               

               
Cow position:
               
chr13:5501004-5500647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 227
               

               
Conread position:
               
555-878
               

               
Cow position:
               
chr13:34019725-34019396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 215
               

               
Conread position:
               
561-888
               

               
Cow position:
               
chr13:46527458-46527805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 292
               

               
Conread position:
               
564-888
               

               
Cow position:
               
chr13:60648797-60648451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 307
               

               
Conread position:
               
576-886
               

               
Cow position:
               
chr13:33335278-33334967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 154
               

               
Conread position:
               
632-882
               

               
Cow position:
               
chr13:33524865-33524608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 224
               

               
Conread position:
               
634-886
               

               
Cow position:
               
chr13:20541172-20540904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
52, 232
               

               
Conread position:
               
668-876
               

               
Cow position:
               
chr13:50193265-50193055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 182
               

               
Conread position:
               
668-882
               

               
Cow position:
               
chr13:60468557-60468774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 184
               

               
Conread position:
               
682-882
               

               
Cow position:
               
chr13:42217536-42217334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
690-886
               

               
Cow position:
               
chr13:14186153-14186352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
88, 131
               
Show alignments to all cow chromosomes.