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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10161A11.5
        

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:17903734-17903546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr16:17288862-17289070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 204
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr16:34220099-34220315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 175
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr16:40562146-40562360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr16:5363811-5364031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr16:7549882-7550096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr16:17945435-17945647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 200
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr16:20025362-20025570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr16:48006577-48006331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr16:33226623-33226374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 134
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr16:50289065-50289322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 203
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr16:7505003-7505251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 146
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:47964900-47964648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr16:2417674-2417405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr16:42242200-42241942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr16:27701337-27701077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
162, 39
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:14754407-14754141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:18205876-18206142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:21381646-21381385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:33645930-33646202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:33704722-33704989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:38708915-38708649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:14568568-14568303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:10504748-10505004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:34754045-34753756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr16:17135144-17134859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr16:22772893-22773176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 198
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr16:51598690-51598411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
194, 47
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:424898-424605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:23681283-23681565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:25839534-25839814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:31117699-31117412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:39474230-39473954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:42444071-42444364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:45121954-45122245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 277
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:46552722-46552996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
191, 21
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr16:56231742-56232015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 33
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr16:14242286-14242573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr16:51500849-51501136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr16:52275215-52274927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 202
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:8737980-8738274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 277
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:820164-820459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 276
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:24855457-24855742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:40333411-40333126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:45554358-45554647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 197
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr16:12320137-12320434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr16:11660531-11660257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
264, 55
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:4970799-4971099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:19052555-19052846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:21450762-21451069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 179
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:45139587-45139876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:45731473-45731188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 162
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr16:7583313-7583612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr16:13689580-13689878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr16:33134857-33135143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr16:40514565-40514279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
54, 184
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr16:41578141-41578443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 262
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:56358352-56358064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
179, 21
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr16:26649714-26649415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
42, 255
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr16:13306948-13306645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr16:10032555-10032877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 191
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr16:9905006-9905330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
53, 278
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr16:25170309-25170629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr16:42078925-42078607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
200, 47
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr16:3114454-3114667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr16:27659834-27659593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr16:14685473-14685204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr16:48095847-48095582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr16:4857185-4856892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr16:50417771-50417498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr16:52834973-52834684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
36, 186
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr16:47820483-47820796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr16:31079174-31078878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 113
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr16:5256911-5257123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr16:41697168-41696945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr16:25386892-25387155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 110
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr16:23730009-23729725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr16:52169974-52170257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr16:19670430-19670151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr16:11082920-11083208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr16:45677894-45678190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
6, 254
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr16:46433412-46433081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 287
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr16:54579087-54579351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr16:48398335-48398048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr16:9552983-9553222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr16:31149321-31149592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
170, 27
               

               
Conread position:
               
20-289
               

               
Cow position:
               
chr16:45294477-45294758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 218
               

               
Conread position:
               
23-260
               

               
Cow position:
               
chr16:16570852-16571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
23-280
               

               
Cow position:
               
chr16:48956736-48957002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
23-293
               

               
Cow position:
               
chr16:30305877-30305600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
23-295
               

               
Cow position:
               
chr16:54710096-54709832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
23-308
               

               
Cow position:
               
chr16:11584460-11584174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
196, 28
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr16:16597500-16597771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr16:20824423-20824690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
173, 15
               

               
Conread position:
               
25-297
               

               
Cow position:
               
chr16:19643824-19644107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
25-297
               

               
Cow position:
               
chr16:25484283-25484539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr16:56082423-56082128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
26-240
               

               
Cow position:
               
chr16:21370240-21370021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
156, 18
               

               
Conread position:
               
27-264
               

               
Cow position:
               
chr16:15945305-15945064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 17
               

               
Conread position:
               
30-272
               

               
Cow position:
               
chr16:51795655-51795408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr16:9985433-9985245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
43-288
               

               
Cow position:
               
chr16:37401213-37401451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
43-360
               

               
Cow position:
               
chr16:11135019-11134706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
145, 222
               

               
Conread position:
               
46-262
               

               
Cow position:
               
chr16:47518810-47519018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
127, 165
               

               
Conread position:
               
46-298
               

               
Cow position:
               
chr16:45813729-45813477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
47-238
               

               
Cow position:
               
chr16:55945176-55944984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 147
               

               
Conread position:
               
47-296
               

               
Cow position:
               
chr16:22984723-22984974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr16:33235193-33235035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
52-262
               

               
Cow position:
               
chr16:32893599-32893805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 113
               

               
Conread position:
               
52-291
               

               
Cow position:
               
chr16:1582955-1582709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
53-260
               

               
Cow position:
               
chr16:48613503-48613294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
53-278
               

               
Cow position:
               
chr16:11359123-11359349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 116
               

               
Conread position:
               
56-300
               

               
Cow position:
               
chr16:7136370-7136124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
119, 108
               

               
Conread position:
               
58-304
               

               
Cow position:
               
chr16:56626915-56627160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
139, 15
               

               
Conread position:
               
60-263
               

               
Cow position:
               
chr16:53451684-53451892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
68-263
               

               
Cow position:
               
chr16:7812677-7812880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
95, 85
               

               
Conread position:
               
68-288
               

               
Cow position:
               
chr16:14376769-14376993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 47
               

               
Conread position:
               
70-263
               

               
Cow position:
               
chr16:12324444-12324641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
70-292
               

               
Cow position:
               
chr16:31484673-31484449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
75-263
               

               
Cow position:
               
chr16:34205070-34204878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
116, 171
               

               
Conread position:
               
82-257
               

               
Cow position:
               
chr16:39385492-39385670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
115, 85
               

               
Conread position:
               
85-297
               

               
Cow position:
               
chr16:19478761-19478545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 166
               

               
Conread position:
               
106-263
               

               
Cow position:
               
chr16:51143824-51143986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
108-291
               

               
Cow position:
               
chr16:15252025-15251844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
165, 95
               

               
Conread position:
               
111-312
               

               
Cow position:
               
chr16:8810064-8809856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
117-303
               

               
Cow position:
               
chr16:5396781-5396588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
449-888
               

               
Cow position:
               
chr16:16897891-16898338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
466-792
               

               
Cow position:
               
chr16:19638514-19638841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
466-806
               

               
Cow position:
               
chr16:15477297-15477641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
466-886
               

               
Cow position:
               
chr16:27732924-27732499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
467-572
               

               
Cow position:
               
chr16:41755005-41754899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
467-766
               

               
Cow position:
               
chr16:21186069-21186379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
119, 129
               

               
Conread position:
               
467-774
               

               
Cow position:
               
chr16:11284046-11284364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
467-798
               

               
Cow position:
               
chr16:25189102-25189441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
117, 112
               

               
Conread position:
               
467-835
               

               
Cow position:
               
chr16:25171800-25172159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
467-844
               

               
Cow position:
               
chr16:23251983-23251582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
467-875
               

               
Cow position:
               
chr16:40295720-40295291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 304
               

               
Conread position:
               
467-876
               

               
Cow position:
               
chr16:20202448-20202845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
310, 116
               

               
Conread position:
               
467-880
               

               
Cow position:
               
chr16:4478516-4478087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr16:1860670-1861114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr16:5662283-5662718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr16:10375145-10374718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr16:27593961-27594386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 113
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr16:28196791-28196362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
117, 106
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr16:51084606-51085036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 93
               

               
Conread position:
               
467-883
               

               
Cow position:
               
chr16:31591462-31591039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 88
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr16:14665355-14664931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr16:15567710-15568140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 99
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr16:23535436-23535018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 76
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr16:25342412-25342854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 405
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr16:54324881-54324452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 76
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr16:23671151-23671584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
154, 304
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr16:39824389-39824807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 117
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr16:41762292-41762708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 127
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr16:49255774-49255348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
468-880
               

               
Cow position:
               
chr16:19779195-19778775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
468-882
               

               
Cow position:
               
chr16:25001844-25001411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
162, 55
               

               
Conread position:
               
469-888
               

               
Cow position:
               
chr16:28437020-28436577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
470-886
               

               
Cow position:
               
chr16:837774-838200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 89
               

               
Conread position:
               
471-818
               

               
Cow position:
               
chr16:3828814-3828480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
471-873
               

               
Cow position:
               
chr16:17056512-17056105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 81
               

               
Conread position:
               
472-888
               

               
Cow position:
               
chr16:47474717-47475130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
149, 93
               

               
Conread position:
               
473-802
               

               
Cow position:
               
chr16:37455541-37455211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
144, 67
               

               
Conread position:
               
473-886
               

               
Cow position:
               
chr16:25086077-25086495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
141, 70
               

               
Conread position:
               
473-888
               

               
Cow position:
               
chr16:5890457-5890885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
106, 93
               

               
Conread position:
               
475-809
               

               
Cow position:
               
chr16:38023784-38024124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
475-886
               

               
Cow position:
               
chr16:1432653-1433070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 92
               

               
Conread position:
               
475-886
               

               
Cow position:
               
chr16:12537485-12537065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
159, 8
               

               
Conread position:
               
476-681
               

               
Cow position:
               
chr16:20331244-20331464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
476-717
               

               
Cow position:
               
chr16:23801647-23801408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
476-804
               

               
Cow position:
               
chr16:48334107-48333772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
476-833
               

               
Cow position:
               
chr16:7675995-7675622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
153, 104
               

               
Conread position:
               
476-844
               

               
Cow position:
               
chr16:3330401-3330774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
141, 76
               

               
Conread position:
               
476-877
               

               
Cow position:
               
chr16:26664216-26664626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
476-880
               

               
Cow position:
               
chr16:2482676-2482258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
476-880
               

               
Cow position:
               
chr16:2726766-2726338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
82, 396
               

               
Conread position:
               
476-882
               

               
Cow position:
               
chr16:3088742-3088325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:8815641-8815222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:10438715-10439141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:15185535-15185962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:23983759-23984183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 167
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:25442091-25442512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 25
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:29047486-29047905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 25
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:41166183-41165787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
157, 85
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr16:43896811-43896379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 316
               

               
Conread position:
               
476-887
               

               
Cow position:
               
chr16:707793-707381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
476-888
               

               
Cow position:
               
chr16:34530766-34531172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
477-886
               

               
Cow position:
               
chr16:406576-406154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 88
               

               
Conread position:
               
477-886
               

               
Cow position:
               
chr16:1566991-1566571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
477-886
               

               
Cow position:
               
chr16:25457013-25456598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 24
               

               
Conread position:
               
489-886
               

               
Cow position:
               
chr16:28470598-28470187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 49
               

               
Conread position:
               
494-844
               

               
Cow position:
               
chr16:51038557-51038905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
494-888
               

               
Cow position:
               
chr16:10565297-10564898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
496-882
               

               
Cow position:
               
chr16:33011-33404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
509-844
               

               
Cow position:
               
chr16:19080462-19080812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
509-886
               

               
Cow position:
               
chr16:40557451-40557062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
541-770
               

               
Cow position:
               
chr16:25933213-25933463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
550-847
               

               
Cow position:
               
chr16:37481890-37481585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 222
               

               
Conread position:
               
551-888
               

               
Cow position:
               
chr16:27299597-27299264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
552-880
               

               
Cow position:
               
chr16:9931274-9931610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 175
               

               
Conread position:
               
553-886
               

               
Cow position:
               
chr16:16520231-16519888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 93
               

               
Conread position:
               
553-888
               

               
Cow position:
               
chr16:19150052-19149719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
556-804
               

               
Cow position:
               
chr16:27714279-27714026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 173
               

               
Conread position:
               
560-833
               

               
Cow position:
               
chr16:7464854-7465148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
569-876
               

               
Cow position:
               
chr16:16228868-16229190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 246
               

               
Conread position:
               
574-888
               

               
Cow position:
               
chr16:32937075-32937408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
576-888
               

               
Cow position:
               
chr16:2238207-2237884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
579-882
               

               
Cow position:
               
chr16:41685690-41685380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
582-882
               

               
Cow position:
               
chr16:1960051-1959743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
35, 213
               

               
Conread position:
               
587-888
               

               
Cow position:
               
chr16:41754047-41753725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
590-888
               

               
Cow position:
               
chr16:41571960-41572273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 205
               

               
Conread position:
               
632-888
               

               
Cow position:
               
chr16:5871511-5871772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 129
               

               
Conread position:
               
632-888
               

               
Cow position:
               
chr16:52591058-52590798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
642-888
               

               
Cow position:
               
chr16:18677993-18678235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
648-886
               

               
Cow position:
               
chr16:51403236-51402992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
690-888
               

               
Cow position:
               
chr16:37480172-37479971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 141
               

               
Conread position:
               
693-887
               

               
Cow position:
               
chr16:47627960-47627768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
724-888
               

               
Cow position:
               
chr16:34504267-34504427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               
Show alignments to all cow chromosomes.