Cow genome map

Conread name: Ss1.1-Ova1-OVRM10161A11.5

Conread position: 1-167
Cow position: chr18:44483889-44483721 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1-203
Cow position: chr18:37023670-37023462 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 1-208
Cow position: chr18:16686454-16686240 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-209
Cow position: chr18:25647369-25647153 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 127

Conread position: 1-210
Cow position: chr18:39875376-39875163 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 47

Conread position: 1-217
Cow position: chr18:28923953-28923745 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 1-239
Cow position: chr18:34834373-34834625 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 97

Conread position: 1-244
Cow position: chr18:28658026-28657780 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 59

Conread position: 1-244
Cow position: chr18:47511888-47512133 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 27

Conread position: 1-257
Cow position: chr18:29356744-29356486 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 189

Conread position: 1-261
Cow position: chr18:20174246-20173986 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 169
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 171

Conread position: 1-262
Cow position: chr18:5578189-5578447 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 101

Conread position: 1-262
Cow position: chr18:5766295-5766560 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 22

Conread position: 1-262
Cow position: chr18:42432211-42431940 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 1-262
Cow position: chr18:55498954-55499222 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 20

Conread position: 1-263
Cow position: chr18:9365799-9366075 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 1-263
Cow position: chr18:14586582-14586326 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 57

Conread position: 1-263
Cow position: chr18:45904011-45903743 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 15

Conread position: 1-263
Cow position: chr18:49100487-49100232 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 168

Conread position: 1-263
Cow position: chr18:51643483-51643216 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 14

Conread position: 1-264
Cow position: chr18:33158836-33159097 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 192, 46

Conread position: 1-277
Cow position: chr18:38669920-38669656 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 196, 51

Conread position: 1-278
Cow position: chr18:18919074-18918795 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 48

Conread position: 1-279
Cow position: chr18:7109011-7109300 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 173

Conread position: 1-279
Cow position: chr18:46048643-46048923 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 192, 24

Conread position: 1-280
Cow position: chr18:25006606-25006336 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-280
Cow position: chr18:30341291-30341013 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 203, 53

Conread position: 1-280
Cow position: chr18:30360261-30359973 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 46

Conread position: 1-280
Cow position: chr18:50095511-50095239 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 15

Conread position: 1-283
Cow position: chr18:6309964-6310253 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 120

Conread position: 1-285
Cow position: chr18:19193483-19193198 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 214

Conread position: 1-285
Cow position: chr18:50959368-50959665 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 124

Conread position: 1-286
Cow position: chr18:55119752-55120044 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 116

Conread position: 1-287
Cow position: chr18:15517294-15516997 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 160

Conread position: 1-287
Cow position: chr18:20462812-20462532 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 163

Conread position: 1-288
Cow position: chr18:11691525-11691228 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 136

Conread position: 1-288
Cow position: chr18:20126188-20126470 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 135

Conread position: 1-289
Cow position: chr18:12117959-12117674 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 32

Conread position: 1-289
Cow position: chr18:19687903-19688212 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 177

Conread position: 1-289
Cow position: chr18:20641606-20641320 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 272, 47

Conread position: 1-289
Cow position: chr18:44262509-44262802 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 133

Conread position: 1-289
Cow position: chr18:49017385-49017661 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 66

Conread position: 1-289
Cow position: chr18:51756978-51757271 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 25

Conread position: 1-289
Cow position: chr18:56181581-56181279 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 164

Conread position: 1-292
Cow position: chr18:9089582-9089874 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 20

Conread position: 1-292
Cow position: chr18:48713432-48713725 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 195

Conread position: 1-295
Cow position: chr18:11779538-11779834 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 21

Conread position: 1-295
Cow position: chr18:42479705-42479394 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 283

Conread position: 1-297
Cow position: chr18:1571354-1571052 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 109

Conread position: 1-298
Cow position: chr18:19849873-19849586 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 108

Conread position: 1-299
Cow position: chr18:55505290-55505595 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 128

Conread position: 1-303
Cow position: chr18:9010604-9010896 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 192, 28

Conread position: 1-304
Cow position: chr18:22120998-22120689 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 60

Conread position: 1-313
Cow position: chr18:51406026-51405715 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 159

Conread position: 1-320
Cow position: chr18:9557866-9558177 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 44

Conread position: 2-190
Cow position: chr18:11684864-11685057 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 156

Conread position: 2-210
Cow position: chr18:7076840-7077049 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 83

Conread position: 2-263
Cow position: chr18:29065500-29065239 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 32

Conread position: 2-297
Cow position: chr18:247798-247512 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 44

Conread position: 2-298
Cow position: chr18:17391099-17390803 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 191, 46

Conread position: 2-365
Cow position: chr18:10977329-10976962 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 40, 119

Conread position: 3-262
Cow position: chr18:10575987-10576255 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 190

Conread position: 3-278
Cow position: chr18:49038344-49038620 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 40, 247

Conread position: 3-287
Cow position: chr18:1954704-1954400 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 38, 18

Conread position: 3-289
Cow position: chr18:42431728-42431435 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 193

Conread position: 3-291
Cow position: chr18:18592360-18592642 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 189

Conread position: 3-291
Cow position: chr18:31672625-31672335 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 75

Conread position: 3-292
Cow position: chr18:12242159-12242457 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 118

Conread position: 3-294
Cow position: chr18:10904732-10905030 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 270

Conread position: 3-299
Cow position: chr18:8171201-8170903 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 48, 199

Conread position: 3-303
Cow position: chr18:30586336-30586041 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 18

Conread position: 3-318
Cow position: chr18:33299786-33300095 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 185

Conread position: 4-262
Cow position: chr18:11183831-11184091 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 44

Conread position: 4-279
Cow position: chr18:51594917-51594649 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 21

Conread position: 4-289
Cow position: chr18:29958272-29957999 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 11

Conread position: 4-290
Cow position: chr18:9974438-9974148 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 179, 44

Conread position: 4-296
Cow position: chr18:6881463-6881170 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 106, 21

Conread position: 9-180
Cow position: chr18:38686980-38687145 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 9-289
Cow position: chr18:31711677-31711398 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 183

Conread position: 9-291
Cow position: chr18:43797063-43796779 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 276

Conread position: 17-192
Cow position: chr18:45570911-45571089 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 117

Conread position: 17-260
Cow position: chr18:4626880-4626640 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 174, 31

Conread position: 18-289
Cow position: chr18:15613955-15613685 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 135, 7

Conread position: 22-263
Cow position: chr18:32189608-32189364 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 196

Conread position: 23-240
Cow position: chr18:35367282-35367072 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 35

Conread position: 23-263
Cow position: chr18:22569163-22568915 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 217

Conread position: 23-263
Cow position: chr18:28930735-28930488 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 23-263
Cow position: chr18:49015030-49015269 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 102

Conread position: 23-289
Cow position: chr18:8949889-8949617 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 132

Conread position: 23-289
Cow position: chr18:25598337-25598053 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 23-290
Cow position: chr18:46452976-46452703 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 23-291
Cow position: chr18:11790826-11791102 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 99

Conread position: 26-289
Cow position: chr18:22790180-22789913 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 17, 64

Conread position: 26-291
Cow position: chr18:4884612-4884338 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 109

Conread position: 36-277
Cow position: chr18:2146658-2146425 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 153, 0

Conread position: 37-262
Cow position: chr18:29648707-29648932 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 160, 19

Conread position: 40-263
Cow position: chr18:6470020-6470245 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 141, 0

Conread position: 42-203
Cow position: chr18:52413892-52414057 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 42-279
Cow position: chr18:24719241-24719477 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 42-285
Cow position: chr18:37189367-37189118 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 158, 247

Conread position: 43-283
Cow position: chr18:14225319-14225565 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 15

Conread position: 44-262
Cow position: chr18:5647744-5647960 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 44-263
Cow position: chr18:35535217-35534997 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 18

Conread position: 44-269
Cow position: chr18:22516604-22516377 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 148, 13

Conread position: 44-280
Cow position: chr18:9066628-9066870 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 13

Conread position: 44-284
Cow position: chr18:29474674-29474911 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 17

Conread position: 45-287
Cow position: chr18:38601955-38601707 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 45-287
Cow position: chr18:47416931-47417176 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 153

Conread position: 46-288
Cow position: chr18:52251926-52251676 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 113

Conread position: 46-305
Cow position: chr18:50359262-50359517 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 143

Conread position: 47-280
Cow position: chr18:51383463-51383228 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 34

Conread position: 47-288
Cow position: chr18:18843944-18844189 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 6, 86

Conread position: 47-289
Cow position: chr18:23630672-23630434 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 216, 68

Conread position: 48-279
Cow position: chr18:38937755-38937990 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 149, 34

Conread position: 49-291
Cow position: chr18:52642189-52641946 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 212, 8

Conread position: 50-280
Cow position: chr18:47824833-47824604 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 34

Conread position: 52-289
Cow position: chr18:11867275-11867517 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 5

Conread position: 52-297
Cow position: chr18:31557224-31556969 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 6, 118

Conread position: 53-282
Cow position: chr18:31082410-31082171 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 121, 0

Conread position: 53-309
Cow position: chr18:45558085-45558338 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 102

Conread position: 54-197
Cow position: chr18:23505270-23505413 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 57-286
Cow position: chr18:2773450-2773208 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 57-286
Cow position: chr18:2776953-2776711 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 136, 0

Conread position: 58-285
Cow position: chr18:44917701-44917927 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 5

Conread position: 69-287
Cow position: chr18:50632488-50632268 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 143, 113

Conread position: 69-299
Cow position: chr18:4152601-4152370 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 207

Conread position: 85-303
Cow position: chr18:2794001-2793783 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 112, 106

Conread position: 85-324
Cow position: chr18:47802120-47801881 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 30

Conread position: 87-288
Cow position: chr18:11856873-11857071 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 178, 0

Conread position: 88-292
Cow position: chr18:49603070-49602861 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 66

Conread position: 93-261
Cow position: chr18:43125064-43125228 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 99-307
Cow position: chr18:35857940-35857725 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 107-287
Cow position: chr18:9596175-9596352 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 111-261
Cow position: chr18:47419795-47419946 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 59

Conread position: 111-280
Cow position: chr18:49440837-49441013 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 114-263
Cow position: chr18:38228406-38228553 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 117-302
Cow position: chr18:44206082-44205903 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 177, 125

Conread position: 118-280
Cow position: chr18:50004702-50004534 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 118-327
Cow position: chr18:50276240-50276024 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 189

Conread position: 131-288
Cow position: chr18:4485615-4485772 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 135

Conread position: 467-756
Cow position: chr18:46867665-46867385 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 149, 89

Conread position: 467-808
Cow position: chr18:16079906-16080263 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 165, 88

Conread position: 467-819
Cow position: chr18:40479629-40479991 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 117, 106

Conread position: 467-833
Cow position: chr18:11273881-11273502 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 137

Conread position: 467-833
Cow position: chr18:52652145-52652527 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 163, 98

Conread position: 467-882
Cow position: chr18:19353596-19354028 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 290
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 20, 171

Conread position: 467-882
Cow position: chr18:33270178-33270569 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 218, 85

Conread position: 467-882
Cow position: chr18:51342922-51343344 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 286
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 122, 107

Conread position: 467-886
Cow position: chr18:14131629-14132056 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 93

Conread position: 467-886
Cow position: chr18:29865375-29864945 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 88

Conread position: 467-886
Cow position: chr18:37507193-37507627 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 77, 115

Conread position: 467-886
Cow position: chr18:41839577-41839151 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 287
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 63

Conread position: 467-886
Cow position: chr18:51482105-51482519 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 295
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 196, 93

Conread position: 467-886
Cow position: chr18:54022895-54022466 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 292
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 150, 85

Conread position: 467-887
Cow position: chr18:12237456-12237848 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 76

Conread position: 467-888
Cow position: chr18:16392846-16392446 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 37

Conread position: 467-888
Cow position: chr18:32768986-32769392 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 282
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 220, 85

Conread position: 467-888
Cow position: chr18:34043846-34044263 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 284
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 6

Conread position: 468-888
Cow position: chr18:35313607-35314031 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 278
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 137, 58

Conread position: 469-793
Cow position: chr18:8101186-8100843 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 7

Conread position: 469-807
Cow position: chr18:42515436-42515765 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 71

Conread position: 470-875
Cow position: chr18:54004933-54004520 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 162, 82

Conread position: 470-887
Cow position: chr18:38343055-38342638 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 96

Conread position: 473-888
Cow position: chr18:29238138-29238553 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 292
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 156, 85

Conread position: 475-888
Cow position: chr18:37663589-37663976 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 95

Conread position: 476-836
Cow position: chr18:24574706-24574341 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 232
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 153, 63

Conread position: 476-844
Cow position: chr18:56013822-56014210 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 264
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 126, 0

Conread position: 476-882
Cow position: chr18:47742747-47743168 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 288
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 89

Conread position: 476-882
Cow position: chr18:51461808-51461389 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 108

Conread position: 476-886
Cow position: chr18:14417224-14417632 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 57

Conread position: 476-886
Cow position: chr18:16175374-16174955 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 79

Conread position: 476-886
Cow position: chr18:23798891-23799314 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 81

Conread position: 476-886
Cow position: chr18:25352501-25352925 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 319

Conread position: 476-886
Cow position: chr18:27837065-27836640 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 292
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 155, 84

Conread position: 476-886
Cow position: chr18:28972643-28972221 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 84

Conread position: 477-881
Cow position: chr18:20692929-20692516 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 272
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 154, 48

Conread position: 477-888
Cow position: chr18:19405329-19404921 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 276
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 145, 59

Conread position: 478-823
Cow position: chr18:16137603-16137257 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 65

Conread position: 478-882
Cow position: chr18:54170264-54169844 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 151, 56

Conread position: 480-792
Cow position: chr18:46876083-46875776 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 72

Conread position: 495-886
Cow position: chr18:27988446-27988851 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 8, 66

Conread position: 509-886
Cow position: chr18:16089397-16089785 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 51

Conread position: 511-774
Cow position: chr18:25921252-25921529 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 49

Conread position: 538-880
Cow position: chr18:15529502-15529164 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 216
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 147, 93

Conread position: 550-852
Cow position: chr18:43621955-43622242 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 71, 56

Conread position: 553-846
Cow position: chr18:5079168-5078864 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 110, 87

Conread position: 553-886
Cow position: chr18:36509927-36510282 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 318

Conread position: 554-888
Cow position: chr18:29046643-29046289 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 23, 56

Conread position: 556-880
Cow position: chr18:45184603-45184938 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 88, 55

Conread position: 560-797
Cow position: chr18:20235042-20234799 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 130

Conread position: 561-866
Cow position: chr18:29407130-29406817 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 46

Conread position: 576-888
Cow position: chr18:35054476-35054795 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 42, 120

Conread position: 577-738
Cow position: chr18:18528539-18528706 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 37

Conread position: 577-871
Cow position: chr18:4947311-4947605 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 35

Conread position: 587-888
Cow position: chr18:51274728-51274413 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 131

Conread position: 599-888
Cow position: chr18:19485509-19485810 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 7

Conread position: 611-888
Cow position: chr18:37157837-37157559 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 63

Conread position: 690-875
Cow position: chr18:5534477-5534664 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 161

Conread position: 704-888
Cow position: chr18:29021038-29020853 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 45

Conread position: 713-875
Cow position: chr18:35373273-35373112 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 16

Show alignments to all cow chromosomes.