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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10161A11.5
        

               
Conread position:
               
1-180
               

               
Cow position:
               
chr2:45912718-45912533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr2:46330976-46331171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr2:549412-549215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:42927531-42927329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 143
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:69747703-69747494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr2:45784652-45784862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr2:47015419-47015209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:1638518-1638728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:39798155-39798372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:59952937-59952733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr2:44222738-44222953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr2:70704171-70704398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:39584369-39584589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr2:21003087-21003337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr2:1762712-1762956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:46130233-46129995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
180, 99
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr2:15329309-15329544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr2:45535380-45535637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr2:64323159-64323420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
106, 43
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr2:44170476-44170741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr2:39334949-39334688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr2:85795043-85794783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
192, 13
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:17114816-17114555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:24007339-24007603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:39815367-39815109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:45575078-45574822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 20
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:45642574-45642306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:46202187-46202454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:54790199-54790469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:64212642-64212366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:78249653-78249926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:38658866-38658609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:60315428-60315164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr2:42255352-42255621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr2:45542479-45542210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr2:19212136-19211859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr2:33532035-33531737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 154
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:827698-827417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 197
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:9063188-9063472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:19494127-19494417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
42, 276
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:26501016-26500736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:45499286-45498996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:46120726-46120439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:82581015-82580733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 199
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr2:387858-387569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr2:994449-994161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 226
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr2:13001718-13002003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr2:75600640-75600920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 182
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:80044-79754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 276
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr2:38362452-38362171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr2:7573587-7573302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr2:69350652-69350355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr2:71622133-71621834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr2:18621323-18621624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 284
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr2:34750066-34749775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 6
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr2:41248483-41248779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 189
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr2:46033248-46033552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
42, 253
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr2:42607982-42608284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr2:54967923-54968224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr2:4016923-4016646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr2:41452150-41452447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr2:46058094-46057796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr2:19137977-19137675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 275
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr2:40257499-40257200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
42, 271
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr2:80275377-80275073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr2:46189182-46188870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr2:11599353-11599646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr2:18997641-18997943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr2:44051226-44051534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr2:63331886-63331588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr2:56828652-56828333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr2:33497281-33496954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr2:39590168-39590500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr2:1422276-1422538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr2:38965534-38965796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 138
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr2:77157431-77157158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr2:6160419-6160150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr2:992071-992356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 217
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr2:13684614-13684894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 193
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr2:62744090-62743803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr2:24393774-24393463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr2:43994849-43995155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
49, 248
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr2:58153616-58153934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr2:44191396-44191608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 179
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr2:11656810-11657076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr2:37009334-37009593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr2:70847344-70847076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr2:16481943-16481656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr2:70908403-70908129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr2:73094872-73094596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr2:14826203-14826495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 38
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr2:42183287-42183588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
51, 173
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr2:46343224-46342925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr2:40488728-40489028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
92, 107
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr2:33554254-33553941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
40, 207
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr2:57733348-57733632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
48, 199
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr2:17842064-17841776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr2:53649941-53650226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr2:41381921-41382206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 192
               

               
Conread position:
               
4-291
               

               
Cow position:
               
chr2:44007337-44007643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 282
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr2:7533850-7533556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
5-241
               

               
Cow position:
               
chr2:54971094-54971341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 193
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr2:971746-972017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 244
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr2:84480583-84480290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
5-301
               

               
Cow position:
               
chr2:44065500-44065789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr2:75227117-75227417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr2:43790021-43790263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr2:46968267-46968025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
9-261
               

               
Cow position:
               
chr2:80116022-80116282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr2:42800968-42801222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr2:50449982-50449702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
11-289
               

               
Cow position:
               
chr2:13672450-13672728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr2:46164560-46164279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
178, 34
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chr2:30351774-30351517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chr2:45596912-45597165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
17-289
               

               
Cow position:
               
chr2:60091496-60091223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
17-291
               

               
Cow position:
               
chr2:58074415-58074130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
18-203
               

               
Cow position:
               
chr2:40466567-40466757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
22-279
               

               
Cow position:
               
chr2:53501099-53500844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
23-196
               

               
Cow position:
               
chr2:15694149-15694320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
23-263
               

               
Cow position:
               
chr2:43624599-43624353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
23-264
               

               
Cow position:
               
chr2:19328483-19328719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
23-265
               

               
Cow position:
               
chr2:10439774-10440017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
23-289
               

               
Cow position:
               
chr2:41462489-41462211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
23-289
               

               
Cow position:
               
chr2:63250461-63250200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
23-297
               

               
Cow position:
               
chr2:28301142-28301427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
25-276
               

               
Cow position:
               
chr2:82116029-82116286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 156
               

               
Conread position:
               
25-289
               

               
Cow position:
               
chr2:46161894-46162165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 206
               

               
Conread position:
               
26-280
               

               
Cow position:
               
chr2:45478652-45478398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
26-283
               

               
Cow position:
               
chr2:17492573-17492315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
26-290
               

               
Cow position:
               
chr2:46052439-46052714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
28-263
               

               
Cow position:
               
chr2:21410159-21410416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
28-263
               

               
Cow position:
               
chr2:22372008-22371768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
29-276
               

               
Cow position:
               
chr2:15871881-15872129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr2:45619433-45619197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 9
               

               
Conread position:
               
36-294
               

               
Cow position:
               
chr2:20947329-20947583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
40-240
               

               
Cow position:
               
chr2:39500992-39501200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
41-271
               

               
Cow position:
               
chr2:59819849-59819617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 177
               

               
Conread position:
               
43-212
               

               
Cow position:
               
chr2:44217945-44217779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
43-263
               

               
Cow position:
               
chr2:39750076-39750303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
43-279
               

               
Cow position:
               
chr2:61136695-61136936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
43-286
               

               
Cow position:
               
chr2:50905748-50905493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
135, 235
               

               
Conread position:
               
44-309
               

               
Cow position:
               
chr2:21382886-21382616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
149, 12
               

               
Conread position:
               
45-262
               

               
Cow position:
               
chr2:61562063-61561846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
45-263
               

               
Cow position:
               
chr2:38640288-38640505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
47-286
               

               
Cow position:
               
chr2:50914046-50913805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
157, 62
               

               
Conread position:
               
48-286
               

               
Cow position:
               
chr2:16890085-16889848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
48-286
               

               
Cow position:
               
chr2:40373432-40373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
48-289
               

               
Cow position:
               
chr2:15250148-15250379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
6, 96
               

               
Conread position:
               
49-262
               

               
Cow position:
               
chr2:63074883-63074678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
50-286
               

               
Cow position:
               
chr2:81480819-81481054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
51-263
               

               
Cow position:
               
chr2:46351812-46351596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
51-290
               

               
Cow position:
               
chr2:46312412-46312649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
52-262
               

               
Cow position:
               
chr2:35948708-35948495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
52-280
               

               
Cow position:
               
chr2:28330776-28330547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 105
               

               
Conread position:
               
52-285
               

               
Cow position:
               
chr2:77941697-77941465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
145, 69
               

               
Conread position:
               
53-263
               

               
Cow position:
               
chr2:44168040-44168250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
53-280
               

               
Cow position:
               
chr2:41088127-41087902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
53-281
               

               
Cow position:
               
chr2:37619942-37619705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
55-289
               

               
Cow position:
               
chr2:16686528-16686751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
218, 32
               

               
Conread position:
               
56-289
               

               
Cow position:
               
chr2:7194186-7194418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
57-262
               

               
Cow position:
               
chr2:40703690-40703485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 120
               

               
Conread position:
               
57-272
               

               
Cow position:
               
chr2:53491475-53491260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 140
               

               
Conread position:
               
58-303
               

               
Cow position:
               
chr2:43591396-43591148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr2:47879219-47879464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
68-262
               

               
Cow position:
               
chr2:21049340-21049149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
69-263
               

               
Cow position:
               
chr2:1476398-1476595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
69-263
               

               
Cow position:
               
chr2:51099987-51099787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
69-289
               

               
Cow position:
               
chr2:62271595-62271380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
200, 47
               

               
Conread position:
               
74-289
               

               
Cow position:
               
chr2:72315819-72315599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 79
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr2:4207561-4207363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
90-286
               

               
Cow position:
               
chr2:3773320-3773118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 187
               

               
Conread position:
               
90-351
               

               
Cow position:
               
chr2:78379410-78379150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
94-280
               

               
Cow position:
               
chr2:6952481-6952668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
106-290
               

               
Cow position:
               
chr2:64465751-64465564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
109-240
               

               
Cow position:
               
chr2:35207943-35208073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
109-289
               

               
Cow position:
               
chr2:21327242-21327422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
111-263
               

               
Cow position:
               
chr2:19164937-19164782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
112-303
               

               
Cow position:
               
chr2:1888637-1888450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
175, 93
               

               
Conread position:
               
115-286
               

               
Cow position:
               
chr2:64306810-64306978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
122-285
               

               
Cow position:
               
chr2:9476393-9476227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
124-280
               

               
Cow position:
               
chr2:16412569-16412411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
124-297
               

               
Cow position:
               
chr2:37920717-37920542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
126-288
               

               
Cow position:
               
chr2:73981677-73981840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
139-296
               

               
Cow position:
               
chr2:43577720-43577561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
464-882
               

               
Cow position:
               
chr2:53540615-53541044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
465-886
               

               
Cow position:
               
chr2:10185546-10185115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
467-693
               

               
Cow position:
               
chr2:74857897-74858117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
154, 76
               

               
Conread position:
               
467-714
               

               
Cow position:
               
chr2:20901411-20901150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
467-831
               

               
Cow position:
               
chr2:41048369-41047989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
467-834
               

               
Cow position:
               
chr2:53330443-53330821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
154, 76
               

               
Conread position:
               
467-844
               

               
Cow position:
               
chr2:211577-211219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
305, 106
               

               
Conread position:
               
467-844
               

               
Cow position:
               
chr2:28613657-28613260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
467-875
               

               
Cow position:
               
chr2:28793928-28794340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
467-880
               

               
Cow position:
               
chr2:19012035-19012471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 93
               

               
Conread position:
               
467-880
               

               
Cow position:
               
chr2:38374468-38374889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
161, 76
               

               
Conread position:
               
467-880
               

               
Cow position:
               
chr2:45916148-45915733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
467-880
               

               
Cow position:
               
chr2:52748191-52747775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:364387-363959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 133
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:2412115-2411678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
97, 382
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:3323880-3323456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:4402477-4402041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:6962198-6962619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
133, 98
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:9908595-9909023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:9958386-9957964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 119
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:17424533-17424968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 402
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:25028611-25028196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
162, 98
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:26905073-26904646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:26922107-26922536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:39422305-39422734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:47037753-47037324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 108
               

               
Conread position:
               
467-882
               

               
Cow position:
               
chr2:52617156-52617585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
117, 106
               

               
Conread position:
               
467-885
               

               
Cow position:
               
chr2:51617934-51618375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr2:10610965-10610532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
165, 98
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr2:13045032-13044595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
162, 88
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr2:16074851-16074427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr2:24925246-24925679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
467-886
               

               
Cow position:
               
chr2:65937551-65937115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
163, 98
               

               
Conread position:
               
467-887
               

               
Cow position:
               
chr2:35356697-35357117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:174878-174452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:387099-386670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 70
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:11693167-11693590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:15576157-15575736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 54
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:36277712-36277307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:41180819-41181228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:41687451-41687883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 72
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:42332208-42331775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
162, 29
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:43961377-43961774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
217, 54
               

               
Conread position:
               
467-888
               

               
Cow position:
               
chr2:45967344-45966921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
468-664
               

               
Cow position:
               
chr2:45918873-45918657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
469-801
               

               
Cow position:
               
chr2:62055874-62056206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
469-835
               

               
Cow position:
               
chr2:49625221-49624857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
469-886
               

               
Cow position:
               
chr2:28648919-28648497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
469-886
               

               
Cow position:
               
chr2:78743266-78743673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
205, 53
               

               
Conread position:
               
470-888
               

               
Cow position:
               
chr2:19225564-19225980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
472-888
               

               
Cow position:
               
chr2:36975781-36976199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
473-880
               

               
Cow position:
               
chr2:34563975-34563556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
141, 69
               

               
Conread position:
               
473-888
               

               
Cow position:
               
chr2:44934294-44933874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
475-886
               

               
Cow position:
               
chr2:1691658-1692074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
151, 77
               

               
Conread position:
               
476-676
               

               
Cow position:
               
chr2:24147553-24147748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
476-785
               

               
Cow position:
               
chr2:1114222-1114537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
476-788
               

               
Cow position:
               
chr2:31298481-31298802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
163, 102
               

               
Conread position:
               
476-875
               

               
Cow position:
               
chr2:47602575-47602163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
154, 76
               

               
Conread position:
               
476-877
               

               
Cow position:
               
chr2:72187797-72187391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 67
               

               
Conread position:
               
476-880
               

               
Cow position:
               
chr2:289092-288682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
476-880
               

               
Cow position:
               
chr2:11158432-11158014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 88
               

               
Conread position:
               
476-882
               

               
Cow position:
               
chr2:574283-574699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
138, 84
               

               
Conread position:
               
476-882
               

               
Cow position:
               
chr2:49628467-49628886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
113, 124
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:282001-281573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:5903631-5903228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 84
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:8119234-8119655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 84
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:12223584-12223165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:16900949-16901368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 80
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:25743233-25743651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:42670015-42669596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 111
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:47811538-47811963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
154, 64
               

               
Conread position:
               
476-886
               

               
Cow position:
               
chr2:80292063-80291650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
476-888
               

               
Cow position:
               
chr2:247188-246770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
476-888
               

               
Cow position:
               
chr2:16283027-16283431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
477-875
               

               
Cow position:
               
chr2:57336236-57336647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 88
               

               
Conread position:
               
477-882
               

               
Cow position:
               
chr2:2087475-2087060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 75
               

               
Conread position:
               
477-882
               

               
Cow position:
               
chr2:36992877-36993279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
164, 18
               

               
Conread position:
               
477-886
               

               
Cow position:
               
chr2:45938991-45938588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
477-886
               

               
Cow position:
               
chr2:81257859-81258290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
101, 394
               

               
Conread position:
               
478-882
               

               
Cow position:
               
chr2:34051848-34052272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
478-886
               

               
Cow position:
               
chr2:25887855-25887436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 102
               

               
Conread position:
               
484-873
               

               
Cow position:
               
chr2:26868051-26867676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
489-833
               

               
Cow position:
               
chr2:40453604-40453951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
97, 85
               

               
Conread position:
               
489-888
               

               
Cow position:
               
chr2:55483448-55483041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
495-882
               

               
Cow position:
               
chr2:6673946-6674333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
496-888
               

               
Cow position:
               
chr2:32656356-32656752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
116, 37
               

               
Conread position:
               
499-882
               

               
Cow position:
               
chr2:14210085-14209714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
501-886
               

               
Cow position:
               
chr2:10264689-10264297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
535-877
               

               
Cow position:
               
chr2:36082545-36082907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
547-886
               

               
Cow position:
               
chr2:33795112-33794759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
81, 248
               

               
Conread position:
               
550-880
               

               
Cow position:
               
chr2:25766767-25767106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
65, 164
               

               
Conread position:
               
550-882
               

               
Cow position:
               
chr2:31662829-31663168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
550-886
               

               
Cow position:
               
chr2:32065282-32064926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 231
               

               
Conread position:
               
550-887
               

               
Cow position:
               
chr2:34473825-34473482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
550-888
               

               
Cow position:
               
chr2:10732078-10731746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 101
               

               
Conread position:
               
553-882
               

               
Cow position:
               
chr2:36029616-36029288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
553-886
               

               
Cow position:
               
chr2:52063523-52063872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
77, 313
               

               
Conread position:
               
553-888
               

               
Cow position:
               
chr2:905035-905377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 167
               

               
Conread position:
               
553-888
               

               
Cow position:
               
chr2:16291445-16291801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 186
               

               
Conread position:
               
557-888
               

               
Cow position:
               
chr2:32458288-32457951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
562-844
               

               
Cow position:
               
chr2:5869577-5869289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
569-887
               

               
Cow position:
               
chr2:13481912-13481592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 156
               

               
Conread position:
               
574-880
               

               
Cow position:
               
chr2:56801841-56801548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
574-888
               

               
Cow position:
               
chr2:24471850-24471512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 299
               

               
Conread position:
               
575-833
               

               
Cow position:
               
chr2:50078349-50078629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
590-888
               

               
Cow position:
               
chr2:54693747-54694056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 226
               

               
Conread position:
               
590-888
               

               
Cow position:
               
chr2:72906418-72906100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 280
               

               
Conread position:
               
596-883
               

               
Cow position:
               
chr2:49631324-49631615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
633-886
               

               
Cow position:
               
chr2:24926266-24926528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
53, 138
               

               
Conread position:
               
680-888
               

               
Cow position:
               
chr2:56888642-56888852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
683-882
               

               
Cow position:
               
chr2:12696560-12696360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 142
               

               
Conread position:
               
687-886
               

               
Cow position:
               
chr2:22078814-22079018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 165
               

               
Conread position:
               
692-886
               

               
Cow position:
               
chr2:50982224-50982035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
712-888
               

               
Cow position:
               
chr2:12363049-12362867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               
Show alignments to all cow chromosomes.