Cow genome map

Conread name: Ss1.1-Ova1-OVRM10161A11.5

Conread position: 1-210
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 165

Conread position: 1-236
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 195, 35

Conread position: 1-236
Cow position:
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 108

Conread position: 1-239
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 127

Conread position: 1-256
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 51, 203

Conread position: 1-259
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 1-262
Cow position:
Alignm length: 269
Alignm identity: 177
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 203

Conread position: 1-262
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 43

Conread position: 1-263
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 74

Conread position: 1-263
Cow position:
Alignm length: 274
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 149

Conread position: 1-263
Cow position:
Alignm length: 268
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 20

Conread position: 1-263
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 149

Conread position: 1-264
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 162

Conread position: 1-264
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 42, 197

Conread position: 1-273
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 126

Conread position: 1-279
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 191, 57

Conread position: 1-280
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 177, 21

Conread position: 1-280
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 1-280
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 124

Conread position: 1-285
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 36

Conread position: 1-285
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 21

Conread position: 1-287
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 70, 167

Conread position: 1-287
Cow position:
Alignm length: 293
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 126

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 104

Conread position: 1-288
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 255, 67

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 195
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 162, 11

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 74

Conread position: 1-289
Cow position:
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 18

Conread position: 1-289
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 1-289
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 66

Conread position: 1-289
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 124

Conread position: 1-291
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 105

Conread position: 1-291
Cow position:
Alignm length: 306
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 159

Conread position: 1-292
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 110

Conread position: 1-292
Cow position:
Alignm length: 301
Alignm identity: 195
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 43

Conread position: 1-294
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 61, 29

Conread position: 1-297
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 259

Conread position: 1-298
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 9

Conread position: 1-301
Cow position:
Alignm length: 310
Alignm identity: 205
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 119

Conread position: 1-301
Cow position:
Alignm length: 316
Alignm identity: 208
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 25

Conread position: 2-180
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 71

Conread position: 2-298
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 278

Conread position: 2-345
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 46, 264

Conread position: 3-203
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 103, 115

Conread position: 3-263
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 57

Conread position: 3-263
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 3-287
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 162

Conread position: 3-291
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 195

Conread position: 3-293
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 167

Conread position: 3-294
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 147, 55

Conread position: 3-306
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 137

Conread position: 3-316
Cow position:
Alignm length: 328
Alignm identity: 229
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 48, 145

Conread position: 3-322
Cow position:
Alignm length: 329
Alignm identity: 207
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 86

Conread position: 4-291
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 41

Conread position: 5-263
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 179

Conread position: 13-238
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 143

Conread position: 23-209
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 11

Conread position: 23-263
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 20

Conread position: 23-285
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 151, 25

Conread position: 26-297
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 43

Conread position: 27-263
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 164, 21

Conread position: 37-288
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 232, 0

Conread position: 43-263
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 113

Conread position: 43-264
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 13

Conread position: 44-278
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 154, 175

Conread position: 45-277
Cow position:
Alignm length: 236
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 109, 146

Conread position: 46-262
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 48-262
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 183

Conread position: 48-287
Cow position:
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 25

Conread position: 52-263
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 30

Conread position: 54-289
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 138, 9

Conread position: 55-247
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 10

Conread position: 69-259
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 85

Conread position: 74-263
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 74-301
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 44

Conread position: 84-288
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 85-262
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 106-288
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 109-286
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 11

Conread position: 122-286
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 466-880
Cow position:
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 8

Conread position: 467-693
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 162, 71

Conread position: 467-709
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 5

Conread position: 467-733
Cow position:
Alignm length: 277
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 158, 91

Conread position: 467-880
Cow position:
Alignm length: 418
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 98

Conread position: 467-880
Cow position:
Alignm length: 436
Alignm identity: 297
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 154, 88

Conread position: 467-880
Cow position:
Alignm length: 439
Alignm identity: 300
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 40

Conread position: 467-882
Cow position:
Alignm length: 431
Alignm identity: 284
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 119, 15

Conread position: 467-882
Cow position:
Alignm length: 441
Alignm identity: 299
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 119, 92

Conread position: 467-886
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 402

Conread position: 467-886
Cow position:
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 48

Conread position: 467-886
Cow position:
Alignm length: 435
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 97

Conread position: 467-886
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 157, 64

Conread position: 467-886
Cow position:
Alignm length: 431
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 137

Conread position: 467-887
Cow position:
Alignm length: 427
Alignm identity: 289
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 5

Conread position: 467-888
Cow position:
Alignm length: 441
Alignm identity: 303
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 11, 6

Conread position: 467-888
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 91

Conread position: 467-888
Cow position:
Alignm length: 423
Alignm identity: 273
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 6

Conread position: 468-888
Cow position:
Alignm length: 439
Alignm identity: 299
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 27

Conread position: 469-875
Cow position:
Alignm length: 420
Alignm identity: 274
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 73

Conread position: 469-877
Cow position:
Alignm length: 422
Alignm identity: 285
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 152, 110

Conread position: 472-888
Cow position:
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 94

Conread position: 473-717
Cow position:
Alignm length: 251
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 473-888
Cow position:
Alignm length: 429
Alignm identity: 277
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 143, 93

Conread position: 476-833
Cow position:
Alignm length: 383
Alignm identity: 261
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 151, 89

Conread position: 476-880
Cow position:
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 78

Conread position: 476-886
Cow position:
Alignm length: 434
Alignm identity: 299
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 154, 84

Conread position: 476-886
Cow position:
Alignm length: 429
Alignm identity: 286
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 386

Conread position: 476-886
Cow position:
Alignm length: 434
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 395

Conread position: 476-888
Cow position:
Alignm length: 422
Alignm identity: 282
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 137, 67

Conread position: 477-886
Cow position:
Alignm length: 438
Alignm identity: 291
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 190, 80

Conread position: 477-888
Cow position:
Alignm length: 418
Alignm identity: 273
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 58

Conread position: 478-802
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 75

Conread position: 478-856
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 106, 100

Conread position: 480-818
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 149, 54

Conread position: 489-882
Cow position:
Alignm length: 406
Alignm identity: 274
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 129, 63

Conread position: 500-886
Cow position:
Alignm length: 405
Alignm identity: 278
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 121, 56

Conread position: 501-888
Cow position:
Alignm length: 402
Alignm identity: 266
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 101

Conread position: 511-887
Cow position:
Alignm length: 388
Alignm identity: 261
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 119, 20

Conread position: 515-845
Cow position:
Alignm length: 347
Alignm identity: 229
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 75, 62

Conread position: 550-849
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 189

Conread position: 553-882
Cow position:
Alignm length: 357
Alignm identity: 243
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 40

Conread position: 553-886
Cow position:
Alignm length: 357
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 70, 319

Conread position: 562-830
Cow position:
Alignm length: 284
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 257

Conread position: 562-888
Cow position:
Alignm length: 342
Alignm identity: 224
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 19

Conread position: 577-875
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 145

Conread position: 635-882
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 55

Conread position: 637-882
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 42, 222

Conread position: 689-886
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 83, 160

Show alignments to all cow chromosomes.