Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10161A11.5 |
| Conread position: | 1-205 |
| Cow position: | chr21:45262832-45262623 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 1-208 |
| Cow position: | chr21:29484958-29485168 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 1-262 |
| Cow position: | chr21:17890282-17890552 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 154 |
| Conread position: | 1-262 |
| Cow position: | chr21:22860978-22861241 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 151 |
| Conread position: | 1-263 |
| Cow position: | chr21:11644991-11644716 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 41, 172 |
| Conread position: | 1-263 |
| Cow position: | chr21:14126267-14126522 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 1-263 |
| Cow position: | chr21:20160657-20160928 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 164 |
| Conread position: | 1-263 |
| Cow position: | chr21:22014166-22014441 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 1-263 |
| Cow position: | chr21:29069350-29069073 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-263 |
| Cow position: | chr21:30848969-30848698 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 1-263 |
| Cow position: | chr21:32559380-32559121 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 1-264 |
| Cow position: | chr21:42135641-42135368 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-277 |
| Cow position: | chr21:28919545-28919267 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 160 |
| Conread position: | 1-280 |
| Cow position: | chr21:6997919-6998208 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 225 |
| Conread position: | 1-280 |
| Cow position: | chr21:32339758-32339478 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-280 |
| Cow position: | chr21:38449468-38449186 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 125 |
| Conread position: | 1-281 |
| Cow position: | chr21:868946-868650 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 34 |
| Conread position: | 1-285 |
| Cow position: | chr21:641565-641854 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 42, 275 |
| Conread position: | 1-285 |
| Cow position: | chr21:643306-643590 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 1-285 |
| Cow position: | chr21:6051486-6051776 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 1-286 |
| Cow position: | chr21:44214103-44214386 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 126 |
| Conread position: | 1-288 |
| Cow position: | chr21:6713547-6713248 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 1-288 |
| Cow position: | chr21:12461991-12461695 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 42, 273 |
| Conread position: | 1-289 |
| Cow position: | chr21:34654055-34654346 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 1-291 |
| Cow position: | chr21:82058-82335 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 191, 41 |
| Conread position: | 1-291 |
| Cow position: | chr21:33982827-33982537 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 1-292 |
| Cow position: | chr21:957651-957945 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 1-293 |
| Cow position: | chr21:23586859-23587151 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 174 |
| Conread position: | 1-294 |
| Cow position: | chr21:48234181-48233891 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 1-296 |
| Cow position: | chr21:29978781-29978487 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 255 |
| Conread position: | 1-312 |
| Cow position: | chr21:11740142-11739818 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 150 |
| Conread position: | 1-330 |
| Cow position: | chr21:27229815-27229484 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 2-209 |
| Cow position: | chr21:30250216-30250013 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 195, 55 |
| Conread position: | 2-229 |
| Cow position: | chr21:9990490-9990727 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 72 |
| Conread position: | 2-260 |
| Cow position: | chr21:47719325-47719057 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 2-261 |
| Cow position: | chr21:31691462-31691720 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 2-279 |
| Cow position: | chr21:7673100-7673379 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 53 |
| Conread position: | 2-285 |
| Cow position: | chr21:29214181-29213887 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 255 |
| Conread position: | 2-285 |
| Cow position: | chr21:40266104-40266396 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 2-289 |
| Cow position: | chr21:12104344-12104632 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 41, 174 |
| Conread position: | 3-261 |
| Cow position: | chr21:24858296-24858564 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 3-262 |
| Cow position: | chr21:7825196-7824941 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 156, 38 |
| Conread position: | 3-263 |
| Cow position: | chr21:28030269-28030529 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 3-263 |
| Cow position: | chr21:46849146-46848883 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 107 |
| Conread position: | 3-278 |
| Cow position: | chr21:44251860-44251576 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 3-280 |
| Cow position: | chr21:37299439-37299727 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 3-285 |
| Cow position: | chr21:742266-742546 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 40, 103 |
| Conread position: | 3-289 |
| Cow position: | chr21:12154114-12154400 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 116 |
| Conread position: | 3-293 |
| Cow position: | chr21:30222324-30222621 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 274 |
| Conread position: | 3-301 |
| Cow position: | chr21:8426427-8426731 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 67 |
| Conread position: | 3-303 |
| Cow position: | chr21:20262353-20262059 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 5-256 |
| Cow position: | chr21:829227-828967 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 7-289 |
| Cow position: | chr21:7169672-7169963 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 9-263 |
| Cow position: | chr21:802320-802073 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 233, 37 |
| Conread position: | 17-210 |
| Cow position: | chr21:11057880-11057687 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 17-309 |
| Cow position: | chr21:13656640-13656338 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 20-333 |
| Cow position: | chr21:44724367-44724056 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 135 |
| Conread position: | 22-261 |
| Cow position: | chr21:24598655-24598891 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 23-182 |
| Cow position: | chr21:20183072-20183235 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-261 |
| Cow position: | chr21:46599360-46599606 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 160 |
| Conread position: | 23-263 |
| Cow position: | chr21:674685-674918 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 131 |
| Conread position: | 23-303 |
| Cow position: | chr21:71586-71876 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 25-289 |
| Cow position: | chr21:33580424-33580688 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 39-280 |
| Cow position: | chr21:21615802-21616042 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 12, 209 |
| Conread position: | 40-257 |
| Cow position: | chr21:19868933-19868718 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 40-263 |
| Cow position: | chr21:19240851-19240628 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 141, 189 |
| Conread position: | 40-288 |
| Cow position: | chr21:36682348-36682601 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 196, 8 |
| Conread position: | 43-262 |
| Cow position: | chr21:47383535-47383300 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 194 |
| Conread position: | 43-277 |
| Cow position: | chr21:17252954-17252712 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 43-286 |
| Cow position: | chr21:20163734-20163979 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 43-288 |
| Cow position: | chr21:41590540-41590291 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 44-313 |
| Cow position: | chr21:30592278-30592013 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 174, 56 |
| Conread position: | 45-289 |
| Cow position: | chr21:38900802-38901039 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 45-292 |
| Cow position: | chr21:44565688-44565450 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 46-263 |
| Cow position: | chr21:41287764-41287546 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 161, 10 |
| Conread position: | 47-263 |
| Cow position: | chr21:24875380-24875602 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 48-280 |
| Cow position: | chr21:16498550-16498782 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 149, 8 |
| Conread position: | 48-289 |
| Cow position: | chr21:46451922-46451696 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 52-263 |
| Cow position: | chr21:22850956-22851165 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 52-285 |
| Cow position: | chr21:6851206-6851437 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 54-285 |
| Cow position: | chr21:39393784-39394023 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 66-280 |
| Cow position: | chr21:25012130-25012348 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 131, 100 |
| Conread position: | 70-280 |
| Cow position: | chr21:40820801-40820586 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 112, 203 |
| Conread position: | 73-297 |
| Cow position: | chr21:15012494-15012715 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 73-304 |
| Cow position: | chr21:11182608-11182844 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 103 |
| Conread position: | 75-286 |
| Cow position: | chr21:39403468-39403254 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 80-329 |
| Cow position: | chr21:20174380-20174629 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 139, 115 |
| Conread position: | 88-287 |
| Cow position: | chr21:8509364-8509163 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 109, 181 |
| Conread position: | 88-293 |
| Cow position: | chr21:8506476-8506271 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 181 |
| Conread position: | 90-289 |
| Cow position: | chr21:27810462-27810666 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 109-263 |
| Cow position: | chr21:7460698-7460855 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 111-273 |
| Cow position: | chr21:40930382-40930216 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 112-278 |
| Cow position: | chr21:21158905-21159069 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 156, 81 |
| Conread position: | 114-289 |
| Cow position: | chr21:18056033-18055854 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 117-263 |
| Cow position: | chr21:8351194-8351044 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 122-260 |
| Cow position: | chr21:36398459-36398321 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-290 |
| Cow position: | chr21:44732940-44732766 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 438-875 |
| Cow position: | chr21:147207-147653 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 466-882 |
| Cow position: | chr21:49296202-49296604 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 77 |
| Conread position: | 466-886 |
| Cow position: | chr21:35774256-35774667 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 7 |
| Conread position: | 467-728 |
| Cow position: | chr21:27036087-27035815 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 76 |
| Conread position: | 467-860 |
| Cow position: | chr21:23804796-23804410 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 28 |
| Conread position: | 467-865 |
| Cow position: | chr21:36979604-36979188 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 67 |
| Conread position: | 467-880 |
| Cow position: | chr21:2512159-2512586 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 467-882 |
| Cow position: | chr21:11506923-11507353 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 467-882 |
| Cow position: | chr21:12054706-12054278 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 467-882 |
| Cow position: | chr21:34822900-34822471 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 75 |
| Conread position: | 467-882 |
| Cow position: | chr21:37149349-37149737 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 289 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 166, 7 |
| Conread position: | 467-882 |
| Cow position: | chr21:37372550-37372965 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 171, 139 |
| Conread position: | 467-882 |
| Cow position: | chr21:39426373-39426811 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 78, 405 |
| Conread position: | 467-886 |
| Cow position: | chr21:10851398-10851820 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 54 |
| Conread position: | 467-886 |
| Cow position: | chr21:30598168-30597727 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 307 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 163, 98 |
| Conread position: | 467-886 |
| Cow position: | chr21:35145071-35145487 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 88 |
| Conread position: | 467-886 |
| Cow position: | chr21:40270360-40269929 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 50 |
| Conread position: | 467-888 |
| Cow position: | chr21:2539789-2539333 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 91, 23 |
| Conread position: | 467-888 |
| Cow position: | chr21:27567065-27567491 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 150, 98 |
| Conread position: | 467-888 |
| Cow position: | chr21:28985418-28985840 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 85 |
| Conread position: | 469-870 |
| Cow position: | chr21:26849704-26849300 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 103, 121 |
| Conread position: | 469-888 |
| Cow position: | chr21:1075378-1075804 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 7 |
| Conread position: | 470-827 |
| Cow position: | chr21:28736490-28736848 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 142, 63 |
| Conread position: | 470-880 |
| Cow position: | chr21:3780085-3780510 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 89 |
| Conread position: | 470-886 |
| Cow position: | chr21:27069649-27069221 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 95 |
| Conread position: | 470-888 |
| Cow position: | chr21:30388-30784 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 472-678 |
| Cow position: | chr21:21916004-21916214 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 5, 89 |
| Conread position: | 472-888 |
| Cow position: | chr21:6625840-6626276 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 78, 266 |
| Conread position: | 473-805 |
| Cow position: | chr21:4185243-4185578 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 153, 60 |
| Conread position: | 473-888 |
| Cow position: | chr21:45782801-45783215 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 156, 60 |
| Conread position: | 475-882 |
| Cow position: | chr21:218347-218747 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 476-860 |
| Cow position: | chr21:42914685-42915082 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 105 |
| Conread position: | 476-880 |
| Cow position: | chr21:10568024-10568436 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 147, 89 |
| Conread position: | 476-882 |
| Cow position: | chr21:26635836-26635418 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 281 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 476-886 |
| Cow position: | chr21:27284789-27285204 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 293 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 154, 89 |
| Conread position: | 476-886 |
| Cow position: | chr21:31514995-31514573 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 89 |
| Conread position: | 476-886 |
| Cow position: | chr21:33253503-33253924 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 107 |
| Conread position: | 476-886 |
| Cow position: | chr21:47646650-47647074 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 477-673 |
| Cow position: | chr21:5839941-5839743 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 152, 66 |
| Conread position: | 477-863 |
| Cow position: | chr21:4588655-4588284 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 193, 75 |
| Conread position: | 477-874 |
| Cow position: | chr21:38023448-38023861 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 102 |
| Conread position: | 477-886 |
| Cow position: | chr21:5018463-5018883 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 92 |
| Conread position: | 478-866 |
| Cow position: | chr21:2417540-2417936 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 137, 43 |
| Conread position: | 478-888 |
| Cow position: | chr21:39480284-39479887 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 314, 116 |
| Conread position: | 478-888 |
| Cow position: | chr21:47942269-47942694 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 483-886 |
| Cow position: | chr21:1286878-1286472 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 73 |
| Conread position: | 484-886 |
| Cow position: | chr21:2712265-2712651 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 127, 59 |
| Conread position: | 516-888 |
| Cow position: | chr21:4564835-4565206 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 541-888 |
| Cow position: | chr21:24085411-24085058 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 553-888 |
| Cow position: | chr21:29004142-29003788 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 556-781 |
| Cow position: | chr21:15278469-15278238 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 576-875 |
| Cow position: | chr21:28613736-28614060 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 54, 246 |
| Conread position: | 577-886 |
| Cow position: | chr21:2880407-2880082 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 43, 220 |
| Conread position: | 595-816 |
| Cow position: | chr21:31250452-31250682 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 595-888 |
| Cow position: | chr21:21024905-21025202 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 173 |
| Conread position: | 605-886 |
| Cow position: | chr21:468354-468644 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 82, 11 |
| Conread position: | 633-886 |
| Cow position: | chr21:26836662-26836933 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 107 |
| Conread position: | 633-886 |
| Cow position: | chr21:30563152-30563413 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 633-886 |
| Cow position: | chr21:34655318-34655571 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 33, 166 |
| Conread position: | 642-882 |
| Cow position: | chr21:997338-997108 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 658-882 |
| Cow position: | chr21:38801949-38802176 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 122, 194 |
| Conread position: | 659-886 |
| Cow position: | chr21:5839671-5839445 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 668-882 |
| Cow position: | chr21:6414502-6414285 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 112, 184 |
| Conread position: | 680-888 |
| Cow position: | chr21:25125143-25125355 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 710-882 |
| Cow position: | chr21:33710713-33710888 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 70, 142 |
Show alignments to all cow chromosomes.