Cow genome map

Conread name: Ss1.1-Ova1-OVRM10161A11.5

Conread position: 1-173
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 113

Conread position: 1-210
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 12

Conread position: 1-210
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 1-234
Cow position:
Alignm length: 247
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-240
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 13

Conread position: 1-260
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 41, 147

Conread position: 1-260
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 163

Conread position: 1-261
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 115

Conread position: 1-263
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 167

Conread position: 1-263
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 20

Conread position: 1-263
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 25

Conread position: 1-263
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 203

Conread position: 1-263
Cow position:
Alignm length: 269
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 154

Conread position: 1-278
Cow position:
Alignm length: 290
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 27

Conread position: 1-280
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 43, 160

Conread position: 1-285
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 233

Conread position: 1-285
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 25

Conread position: 1-285
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 112

Conread position: 1-285
Cow position:
Alignm length: 300
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 42, 115

Conread position: 1-288
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 196, 114

Conread position: 1-289
Cow position:
Alignm length: 296
Alignm identity: 189
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 242

Conread position: 1-289
Cow position:
Alignm length: 302
Alignm identity: 202
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 199

Conread position: 1-291
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 20

Conread position: 1-291
Cow position:
Alignm length: 303
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 153

Conread position: 1-294
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 1-312
Cow position:
Alignm length: 318
Alignm identity: 214
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 57, 312

Conread position: 2-263
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 28

Conread position: 2-263
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 41

Conread position: 2-263
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 2-288
Cow position:
Alignm length: 294
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 182

Conread position: 2-296
Cow position:
Alignm length: 317
Alignm identity: 222
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 123

Conread position: 3-198
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 84

Conread position: 3-243
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 162

Conread position: 3-263
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 19

Conread position: 3-280
Cow position:
Alignm length: 282
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 3-289
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 40, 66

Conread position: 3-298
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 114

Conread position: 3-301
Cow position:
Alignm length: 312
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 278

Conread position: 3-306
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 3-325
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 39, 19

Conread position: 4-263
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 94, 44

Conread position: 5-262
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 7

Conread position: 5-280
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 17

Conread position: 5-290
Cow position:
Alignm length: 293
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 146

Conread position: 6-286
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 220

Conread position: 17-285
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 111

Conread position: 17-292
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 26, 49

Conread position: 19-263
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 19-263
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 106, 33

Conread position: 19-287
Cow position:
Alignm length: 275
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 179

Conread position: 19-291
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 8

Conread position: 23-196
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 23-301
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 137

Conread position: 23-307
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 91

Conread position: 25-295
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 74

Conread position: 25-299
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 88

Conread position: 28-301
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 100

Conread position: 31-278
Cow position:
Alignm length: 257
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 34-261
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 132

Conread position: 35-292
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 161, 16

Conread position: 42-280
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 44-262
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 126

Conread position: 44-263
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 39

Conread position: 46-328
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 215, 0

Conread position: 48-259
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 141

Conread position: 48-263
Cow position:
Alignm length: 216
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 50-261
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 32

Conread position: 53-287
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 139, 171

Conread position: 54-263
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 7

Conread position: 55-285
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 73-288
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 194

Conread position: 74-280
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 118, 48

Conread position: 80-289
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 101, 163

Conread position: 112-372
Cow position:
Alignm length: 266
Alignm identity: 178
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 42

Conread position: 118-262
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 130-301
Cow position:
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 464-888
Cow position:
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 75

Conread position: 466-886
Cow position:
Alignm length: 443
Alignm identity: 304
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 160, 77

Conread position: 466-887
Cow position:
Alignm length: 428
Alignm identity: 284
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 24, 16

Conread position: 467-794
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 117, 112

Conread position: 467-835
Cow position:
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 75

Conread position: 467-859
Cow position:
Alignm length: 417
Alignm identity: 287
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 119, 92

Conread position: 467-865
Cow position:
Alignm length: 409
Alignm identity: 273
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 160, 89

Conread position: 467-880
Cow position:
Alignm length: 427
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 174, 98

Conread position: 467-880
Cow position:
Alignm length: 433
Alignm identity: 290
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 117, 110

Conread position: 467-882
Cow position:
Alignm length: 433
Alignm identity: 282
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 117, 112

Conread position: 467-882
Cow position:
Alignm length: 448
Alignm identity: 301
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 94, 415

Conread position: 467-882
Cow position:
Alignm length: 435
Alignm identity: 292
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 160, 85

Conread position: 467-882
Cow position:
Alignm length: 434
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 112

Conread position: 467-882
Cow position:
Alignm length: 439
Alignm identity: 298
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 165, 75

Conread position: 467-882
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 100

Conread position: 467-882
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 112

Conread position: 467-882
Cow position:
Alignm length: 420
Alignm identity: 272
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 299, 76

Conread position: 467-882
Cow position:
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 111

Conread position: 467-886
Cow position:
Alignm length: 434
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 98

Conread position: 467-886
Cow position:
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 98

Conread position: 467-888
Cow position:
Alignm length: 447
Alignm identity: 299
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 154, 76

Conread position: 468-888
Cow position:
Alignm length: 428
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 158

Conread position: 469-886
Cow position:
Alignm length: 435
Alignm identity: 289
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 147, 62

Conread position: 469-888
Cow position:
Alignm length: 442
Alignm identity: 289
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 70

Conread position: 469-888
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 115

Conread position: 470-880
Cow position:
Alignm length: 446
Alignm identity: 285
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 94

Conread position: 471-888
Cow position:
Alignm length: 433
Alignm identity: 285
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 211, 58

Conread position: 473-844
Cow position:
Alignm length: 387
Alignm identity: 259
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 92

Conread position: 473-888
Cow position:
Alignm length: 422
Alignm identity: 273
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 141, 64

Conread position: 475-876
Cow position:
Alignm length: 415
Alignm identity: 269
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 109, 125

Conread position: 476-815
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 67

Conread position: 476-880
Cow position:
Alignm length: 432
Alignm identity: 292
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 89

Conread position: 476-880
Cow position:
Alignm length: 431
Alignm identity: 292
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 346

Conread position: 476-882
Cow position:
Alignm length: 430
Alignm identity: 291
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 156, 89

Conread position: 476-886
Cow position:
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 84

Conread position: 476-886
Cow position:
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 84

Conread position: 476-886
Cow position:
Alignm length: 417
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 79

Conread position: 476-887
Cow position:
Alignm length: 427
Alignm identity: 286
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 152, 76

Conread position: 476-888
Cow position:
Alignm length: 422
Alignm identity: 280
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 161, 90

Conread position: 477-766
Cow position:
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 53

Conread position: 477-886
Cow position:
Alignm length: 431
Alignm identity: 294
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 152, 66

Conread position: 477-888
Cow position:
Alignm length: 428
Alignm identity: 288
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 146, 66

Conread position: 478-888
Cow position:
Alignm length: 416
Alignm identity: 262
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 80

Conread position: 489-886
Cow position:
Alignm length: 423
Alignm identity: 276
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 141, 53

Conread position: 494-854
Cow position:
Alignm length: 392
Alignm identity: 266
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 7

Conread position: 494-882
Cow position:
Alignm length: 396
Alignm identity: 266
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 49

Conread position: 497-792
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 109

Conread position: 503-874
Cow position:
Alignm length: 387
Alignm identity: 260
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 126, 229

Conread position: 542-886
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 227

Conread position: 550-887
Cow position:
Alignm length: 360
Alignm identity: 231
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 195

Conread position: 552-792
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 207

Conread position: 553-844
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 77, 237

Conread position: 553-888
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 69

Conread position: 554-772
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 75, 220

Conread position: 562-888
Cow position:
Alignm length: 345
Alignm identity: 231
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 57

Conread position: 571-763
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 89

Conread position: 580-880
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 594-845
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 91

Conread position: 632-842
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 54, 156

Conread position: 632-882
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 229

Conread position: 633-886
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 86

Conread position: 645-886
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 52, 11

Conread position: 668-882
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 112, 184

Conread position: 690-888
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 93, 72

Conread position: 690-888
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 162

Conread position: 706-886
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 67

Conread position: 708-882
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 144

Conread position: 758-888
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 42

Show alignments to all cow chromosomes.