Cow genome map

Conread name: Ss1.1-Ova1-OVRM10161A11.5

Conread position: 1-180
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 24

Conread position: 1-209
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 14

Conread position: 1-261
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 92

Conread position: 1-261
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 112

Conread position: 1-262
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 1-263
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 159

Conread position: 1-263
Cow position:
Alignm length: 280
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 25

Conread position: 1-263
Cow position:
Alignm length: 271
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 210

Conread position: 1-263
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 20

Conread position: 1-263
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 1-263
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 1-263
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-263
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 96

Conread position: 1-264
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 181, 55

Conread position: 1-264
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 34

Conread position: 1-267
Cow position:
Alignm length: 279
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 27

Conread position: 1-276
Cow position:
Alignm length: 287
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 169

Conread position: 1-279
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 73

Conread position: 1-280
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 196, 54

Conread position: 1-280
Cow position:
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 21

Conread position: 1-280
Cow position:
Alignm length: 291
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 275

Conread position: 1-280
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 170

Conread position: 1-280
Cow position:
Alignm length: 288
Alignm identity: 189
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 10

Conread position: 1-283
Cow position:
Alignm length: 294
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 274

Conread position: 1-284
Cow position:
Alignm length: 286
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 6

Conread position: 1-287
Cow position:
Alignm length: 294
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 128

Conread position: 1-288
Cow position:
Alignm length: 293
Alignm identity: 189
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 21

Conread position: 1-289
Cow position:
Alignm length: 308
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 56

Conread position: 1-289
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 21

Conread position: 1-290
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 15

Conread position: 1-290
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 42, 194

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 42, 56

Conread position: 1-291
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 56

Conread position: 1-293
Cow position:
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 275

Conread position: 1-297
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 46, 115

Conread position: 2-209
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 13

Conread position: 2-260
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 195, 19

Conread position: 2-262
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 55

Conread position: 2-263
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 179, 40

Conread position: 2-289
Cow position:
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 251

Conread position: 2-289
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 122

Conread position: 2-290
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 252

Conread position: 2-293
Cow position:
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 14

Conread position: 2-300
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 49, 19

Conread position: 3-181
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 53

Conread position: 3-240
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 31

Conread position: 3-263
Cow position:
Alignm length: 265
Alignm identity: 175
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 108

Conread position: 3-263
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 44, 26

Conread position: 3-274
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 3-278
Cow position:
Alignm length: 285
Alignm identity: 189
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 146

Conread position: 3-278
Cow position:
Alignm length: 287
Alignm identity: 187
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 153

Conread position: 3-288
Cow position:
Alignm length: 297
Alignm identity: 197
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 38, 15

Conread position: 3-290
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 43, 194

Conread position: 4-260
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 31

Conread position: 5-262
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 91

Conread position: 5-321
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 113

Conread position: 9-289
Cow position:
Alignm length: 290
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 60

Conread position: 15-280
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 17-263
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 176

Conread position: 19-263
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 23-263
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 23-264
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 165

Conread position: 23-280
Cow position:
Alignm length: 269
Alignm identity: 186
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 78

Conread position: 26-294
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 87

Conread position: 27-180
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 27-294
Cow position:
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 170

Conread position: 39-263
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 41-287
Cow position:
Alignm length: 249
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 154

Conread position: 42-257
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 211

Conread position: 42-292
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 151, 6

Conread position: 42-338
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 143, 175

Conread position: 43-263
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 120

Conread position: 44-263
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 110

Conread position: 47-259
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 0

Conread position: 47-263
Cow position:
Alignm length: 218
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 10

Conread position: 47-263
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 63

Conread position: 48-264
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 133, 0

Conread position: 48-289
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 165, 0

Conread position: 49-261
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 142, 0

Conread position: 49-262
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 106

Conread position: 56-285
Cow position:
Alignm length: 234
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 58-263
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 97

Conread position: 59-263
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 50

Conread position: 60-263
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 69-277
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 73-279
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 124, 42

Conread position: 73-297
Cow position:
Alignm length: 225
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 73-319
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 196

Conread position: 94-279
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 103, 53

Conread position: 95-294
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 96-280
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 106-286
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 109-263
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 45

Conread position: 109-304
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 160

Conread position: 118-262
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 130-280
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 132-263
Cow position:
Alignm length: 132
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 466-867
Cow position:
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 9

Conread position: 467-767
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 98

Conread position: 467-846
Cow position:
Alignm length: 383
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 23

Conread position: 467-876
Cow position:
Alignm length: 438
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 47

Conread position: 467-880
Cow position:
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 98

Conread position: 467-882
Cow position:
Alignm length: 425
Alignm identity: 287
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 87

Conread position: 467-882
Cow position:
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 112

Conread position: 467-882
Cow position:
Alignm length: 429
Alignm identity: 287
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 119, 140

Conread position: 467-882
Cow position:
Alignm length: 434
Alignm identity: 285
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 92, 45

Conread position: 467-886
Cow position:
Alignm length: 436
Alignm identity: 292
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 119, 92

Conread position: 467-886
Cow position:
Alignm length: 439
Alignm identity: 291
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 119, 400

Conread position: 467-888
Cow position:
Alignm length: 441
Alignm identity: 292
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 162, 66

Conread position: 469-882
Cow position:
Alignm length: 441
Alignm identity: 294
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 76, 368

Conread position: 469-888
Cow position:
Alignm length: 449
Alignm identity: 300
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 80, 23

Conread position: 469-888
Cow position:
Alignm length: 433
Alignm identity: 294
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 175, 15

Conread position: 470-886
Cow position:
Alignm length: 433
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 117, 94

Conread position: 472-887
Cow position:
Alignm length: 428
Alignm identity: 272
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 6, 19

Conread position: 473-887
Cow position:
Alignm length: 425
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 79

Conread position: 473-888
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 91, 104

Conread position: 473-888
Cow position:
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 70

Conread position: 476-871
Cow position:
Alignm length: 406
Alignm identity: 269
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 94, 130

Conread position: 476-882
Cow position:
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 83

Conread position: 476-882
Cow position:
Alignm length: 427
Alignm identity: 283
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 94, 132

Conread position: 476-886
Cow position:
Alignm length: 431
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 84

Conread position: 476-886
Cow position:
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 65

Conread position: 476-886
Cow position:
Alignm length: 431
Alignm identity: 286
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 104, 378

Conread position: 477-886
Cow position:
Alignm length: 430
Alignm identity: 289
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 35

Conread position: 478-882
Cow position:
Alignm length: 415
Alignm identity: 266
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 138, 35

Conread position: 497-875
Cow position:
Alignm length: 392
Alignm identity: 258
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 182, 71

Conread position: 550-886
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 310

Conread position: 551-887
Cow position:
Alignm length: 342
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 78, 97

Conread position: 552-888
Cow position:
Alignm length: 360
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 553-888
Cow position:
Alignm length: 362
Alignm identity: 248
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 76, 254

Conread position: 636-887
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 14

Conread position: 657-882
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 85

Conread position: 668-882
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 115, 184

Conread position: 682-842
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 8

Conread position: 697-882
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 155

Show alignments to all cow chromosomes.