Cow genome map

Conread name: Ss1.1-Ova1-OVRM10161A11.5

Conread position: 1-209
Cow position: chr26:8700115-8699904 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 199

Conread position: 1-217
Cow position: chr26:678047-677826 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 20

Conread position: 1-217
Cow position: chr26:13021213-13020991 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 1-240
Cow position: chr26:33736621-33736376 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 1-262
Cow position: chr26:32834641-32834372 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 34

Conread position: 1-263
Cow position: chr26:9535449-9535716 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 156

Conread position: 1-263
Cow position: chr26:16783756-16784027 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 14

Conread position: 1-263
Cow position: chr26:32897939-32897677 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 164

Conread position: 1-263
Cow position: chr26:33112450-33112183 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 106, 57

Conread position: 1-263
Cow position: chr26:35704320-35704576 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 20

Conread position: 1-264
Cow position: chr26:27491569-27491292 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 121

Conread position: 1-278
Cow position: chr26:7642642-7642356 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 64

Conread position: 1-280
Cow position: chr26:14905879-14905597 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 135

Conread position: 1-280
Cow position: chr26:23924779-23925063 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 197

Conread position: 1-280
Cow position: chr26:24240608-24240904 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 124

Conread position: 1-288
Cow position: chr26:9491858-9492149 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 20

Conread position: 1-288
Cow position: chr26:12893493-12893202 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 42, 154

Conread position: 1-289
Cow position: chr26:6514774-6515061 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 186

Conread position: 1-290
Cow position: chr26:12964764-12964453 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 120

Conread position: 1-290
Cow position: chr26:34060266-34060566 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 193
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-297
Cow position: chr26:5665986-5666275 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 160, 17

Conread position: 1-300
Cow position: chr26:6714361-6714060 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 180, 39

Conread position: 1-303
Cow position: chr26:13979196-13978892 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 137

Conread position: 1-316
Cow position: chr26:23671346-23671670 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 157

Conread position: 1-325
Cow position: chr26:14481621-14481295 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 66, 113

Conread position: 2-263
Cow position: chr26:20769782-20770053 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 2-280
Cow position: chr26:21637107-21636833 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 184

Conread position: 3-263
Cow position: chr26:17057617-17057877 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 33

Conread position: 3-263
Cow position: chr26:22249543-22249287 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 150

Conread position: 3-268
Cow position: chr26:13802047-13802316 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 40, 58

Conread position: 3-280
Cow position: chr26:7687306-7687023 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 178, 53

Conread position: 3-286
Cow position: chr26:8307590-8307303 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 178, 273

Conread position: 3-287
Cow position: chr26:12145186-12144893 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 68

Conread position: 3-287
Cow position: chr26:32670557-32670276 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 13

Conread position: 3-300
Cow position: chr26:647792-647479 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 105

Conread position: 4-209
Cow position: chr26:23315705-23315918 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 5-263
Cow position: chr26:20825173-20824920 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 200, 43

Conread position: 9-279
Cow position: chr26:26888193-26887919 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 155

Conread position: 16-274
Cow position: chr26:28423233-28423499 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 98

Conread position: 17-209
Cow position: chr26:14175229-14175427 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 17-261
Cow position: chr26:22892499-22892247 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 17-278
Cow position: chr26:9604511-9604772 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 175

Conread position: 23-289
Cow position: chr26:28251104-28251382 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 217

Conread position: 23-289
Cow position: chr26:33202115-33201842 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 23-292
Cow position: chr26:19591436-19591709 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 257

Conread position: 23-299
Cow position: chr26:20291738-20291453 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 23-322
Cow position: chr26:12940359-12940667 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 169, 34

Conread position: 25-273
Cow position: chr26:5836864-5836605 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 28-280
Cow position: chr26:19636249-19636509 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 210

Conread position: 45-285
Cow position: chr26:7314601-7314853 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 47-279
Cow position: chr26:34724889-34724656 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 151, 62

Conread position: 48-278
Cow position: chr26:9099546-9099316 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 12

Conread position: 48-286
Cow position: chr26:33253332-33253091 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 147, 10

Conread position: 48-287
Cow position: chr26:4854526-4854774 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 105

Conread position: 48-300
Cow position: chr26:19446117-19446374 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 134, 47

Conread position: 49-290
Cow position: chr26:6487815-6487562 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 51-297
Cow position: chr26:34611195-34610953 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 52-209
Cow position: chr26:33241877-33242033 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 52-263
Cow position: chr26:11875233-11875022 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 145, 10

Conread position: 52-263
Cow position: chr26:34560181-34559969 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 41

Conread position: 57-288
Cow position: chr26:7224350-7224121 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 108

Conread position: 71-294
Cow position: chr26:32517450-32517235 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 84-278
Cow position: chr26:15132656-15132858 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 89-297
Cow position: chr26:33038199-33037988 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 112-302
Cow position: chr26:10502776-10502966 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 135

Conread position: 117-298
Cow position: chr26:32503290-32503107 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 155, 0

Conread position: 118-315
Cow position: chr26:13862984-13862784 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 52

Conread position: 467-676
Cow position: chr26:5218981-5218776 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 147, 75

Conread position: 467-859
Cow position: chr26:9561586-9561179 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 162, 53

Conread position: 467-875
Cow position: chr26:34012878-34013277 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 283
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 147, 85

Conread position: 467-876
Cow position: chr26:14895147-14895567 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 76

Conread position: 467-880
Cow position: chr26:2199838-2200253 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 136

Conread position: 467-882
Cow position: chr26:12587355-12586927 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 60

Conread position: 467-882
Cow position: chr26:18853426-18853839 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 92

Conread position: 467-882
Cow position: chr26:30783964-30784372 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 92, 105

Conread position: 467-886
Cow position: chr26:17325274-17325709 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 98

Conread position: 467-886
Cow position: chr26:19350315-19349882 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 99

Conread position: 467-888
Cow position: chr26:6805859-6805433 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 111

Conread position: 473-756
Cow position: chr26:12666703-12666976 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 160, 61

Conread position: 473-882
Cow position: chr26:21825474-21825056 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 156, 60

Conread position: 476-826
Cow position: chr26:5676321-5676682 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 107

Conread position: 476-829
Cow position: chr26:30588153-30587802 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 157, 78

Conread position: 476-880
Cow position: chr26:8871042-8871458 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 112, 102

Conread position: 476-885
Cow position: chr26:6848228-6847817 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 35

Conread position: 476-886
Cow position: chr26:4603940-4603530 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 67

Conread position: 476-886
Cow position: chr26:17395697-17395281 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 64

Conread position: 489-827
Cow position: chr26:15891615-15891287 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 212
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 491-887
Cow position: chr26:8282582-8282191 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 255
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 111, 69

Conread position: 516-834
Cow position: chr26:18034007-18034307 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 105, 19

Conread position: 542-888
Cow position: chr26:12827202-12827574 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 262

Conread position: 552-875
Cow position: chr26:4328166-4327827 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 187

Conread position: 569-871
Cow position: chr26:1086939-1086616 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 17, 23

Conread position: 594-888
Cow position: chr26:11036735-11037041 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 163

Conread position: 594-888
Cow position: chr26:26271045-26271335 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 9

Conread position: 617-888
Cow position: chr26:16856750-16856471 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 25

Conread position: 645-882
Cow position: chr26:33148487-33148248 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 135, 26

Conread position: 646-844
Cow position: chr26:9843313-9843105 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 668-882
Cow position: chr26:28373819-28373602 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 112, 184

Conread position: 668-882
Cow position: chr26:35369346-35369563 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 112, 184

Conread position: 679-882
Cow position: chr26:9113301-9113508 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 174

Show alignments to all cow chromosomes.