Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10161A11.5 |
| Conread position: | 1-209 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 199 |
| Conread position: | 1-217 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 1-217 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-240 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-262 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 34 |
| Conread position: | 1-263 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 38, 156 |
| Conread position: | 1-263 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 1-263 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 42, 164 |
| Conread position: | 1-263 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 57 |
| Conread position: | 1-263 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 1-264 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 1-278 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 41, 197 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 124 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 42, 154 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 45, 186 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 1-300 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 180, 39 |
| Conread position: | 1-303 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 1-316 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 157 |
| Conread position: | 1-325 |
| Cow position: | |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 113 |
| Conread position: | 2-263 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 2-280 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 184 |
| Conread position: | 3-263 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 3-263 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 150 |
| Conread position: | 3-268 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 3-280 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 178, 53 |
| Conread position: | 3-286 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 178, 273 |
| Conread position: | 3-287 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 3-287 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 3-300 |
| Cow position: | |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 4-209 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-263 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 200, 43 |
| Conread position: | 9-279 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 38, 155 |
| Conread position: | 16-274 |
| Cow position: | |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 27, 98 |
| Conread position: | 17-209 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 17-261 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 17-278 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 175 |
| Conread position: | 23-289 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 36, 217 |
| Conread position: | 23-289 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-292 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 25, 257 |
| Conread position: | 23-299 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 23-322 |
| Cow position: | |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 169, 34 |
| Conread position: | 25-273 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 28-280 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 210 |
| Conread position: | 45-285 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 47-279 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 151, 62 |
| Conread position: | 48-278 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 144, 12 |
| Conread position: | 48-286 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 147, 10 |
| Conread position: | 48-287 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 8, 105 |
| Conread position: | 48-300 |
| Cow position: | |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 134, 47 |
| Conread position: | 49-290 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 51-297 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 52-209 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 52-263 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 145, 10 |
| Conread position: | 52-263 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 57-288 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 108 |
| Conread position: | 71-294 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 84-278 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 89-297 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 112-302 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 135 |
| Conread position: | 117-298 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 118-315 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 467-676 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 147, 75 |
| Conread position: | 467-859 |
| Cow position: | |
| Alignm length: | 416 |
| Alignm identity: | 284 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 162, 53 |
| Conread position: | 467-875 |
| Cow position: | |
| Alignm length: | 422 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 147, 85 |
| Conread position: | 467-876 |
| Cow position: | |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 76 |
| Conread position: | 467-880 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 136 |
| Conread position: | 467-882 |
| Cow position: | |
| Alignm length: | 440 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 60 |
| Conread position: | 467-882 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 92 |
| Conread position: | 467-882 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 290 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 92, 105 |
| Conread position: | 467-886 |
| Cow position: | |
| Alignm length: | 442 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 98 |
| Conread position: | 467-886 |
| Cow position: | |
| Alignm length: | 443 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 467-888 |
| Cow position: | |
| Alignm length: | 436 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 111 |
| Conread position: | 473-756 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 160, 61 |
| Conread position: | 473-882 |
| Cow position: | |
| Alignm length: | 434 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 156, 60 |
| Conread position: | 476-826 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 476-829 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 157, 78 |
| Conread position: | 476-880 |
| Cow position: | |
| Alignm length: | 421 |
| Alignm identity: | 281 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 112, 102 |
| Conread position: | 476-885 |
| Cow position: | |
| Alignm length: | 423 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 35 |
| Conread position: | 476-886 |
| Cow position: | |
| Alignm length: | 425 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 476-886 |
| Cow position: | |
| Alignm length: | 427 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 64 |
| Conread position: | 489-827 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 491-887 |
| Cow position: | |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 516-834 |
| Cow position: | |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 542-888 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 262 |
| Conread position: | 552-875 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 187 |
| Conread position: | 569-871 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 594-888 |
| Cow position: | |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 594-888 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 617-888 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 645-882 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 646-844 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 668-882 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 112, 184 |
| Conread position: | 668-882 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 184 |
| Conread position: | 679-882 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 174 |
Show alignments to all cow chromosomes.