Cow genome map

Conread name: Ss1.1-Ova1-OVRM10161A11.5

Conread position: 1-167
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 119

Conread position: 1-206
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-232
Cow position:
Alignm length: 244
Alignm identity: 169
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 99

Conread position: 1-239
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 193, 14

Conread position: 1-259
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 180, 47

Conread position: 1-260
Cow position:
Alignm length: 275
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 1-260
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-260
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 20

Conread position: 1-262
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 57, 125

Conread position: 1-263
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 18

Conread position: 1-263
Cow position:
Alignm length: 264
Alignm identity: 173
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 85, 47

Conread position: 1-263
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 47, 121

Conread position: 1-263
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 107

Conread position: 1-263
Cow position:
Alignm length: 276
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 118

Conread position: 1-265
Cow position:
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 109

Conread position: 1-272
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 246

Conread position: 1-278
Cow position:
Alignm length: 281
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 1-279
Cow position:
Alignm length: 294
Alignm identity: 192
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1-280
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 158, 43

Conread position: 1-287
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 142

Conread position: 1-288
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 42, 195

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 27

Conread position: 1-290
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 47

Conread position: 1-291
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 119

Conread position: 1-294
Cow position:
Alignm length: 295
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 69

Conread position: 1-297
Cow position:
Alignm length: 306
Alignm identity: 213
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 196, 110

Conread position: 1-297
Cow position:
Alignm length: 303
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 14

Conread position: 1-297
Cow position:
Alignm length: 309
Alignm identity: 201
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 113

Conread position: 1-299
Cow position:
Alignm length: 313
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 308

Conread position: 1-326
Cow position:
Alignm length: 347
Alignm identity: 225
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 159

Conread position: 1-337
Cow position:
Alignm length: 352
Alignm identity: 235
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 32

Conread position: 2-263
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 195, 13

Conread position: 2-285
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 197

Conread position: 2-289
Cow position:
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 19

Conread position: 2-292
Cow position:
Alignm length: 299
Alignm identity: 195
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 71

Conread position: 3-180
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 113

Conread position: 3-261
Cow position:
Alignm length: 275
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 3-263
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 120

Conread position: 3-273
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 171

Conread position: 4-263
Cow position:
Alignm length: 268
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 5-289
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 64

Conread position: 9-301
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 264

Conread position: 17-271
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 93

Conread position: 19-286
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 95

Conread position: 20-263
Cow position:
Alignm length: 250
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 141

Conread position: 21-298
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 7

Conread position: 23-278
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 11

Conread position: 23-288
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 113

Conread position: 23-302
Cow position:
Alignm length: 287
Alignm identity: 188
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 153

Conread position: 26-298
Cow position:
Alignm length: 275
Alignm identity: 186
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 167, 22

Conread position: 27-273
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 163

Conread position: 28-298
Cow position:
Alignm length: 279
Alignm identity: 190
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 156

Conread position: 30-287
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 233

Conread position: 43-291
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 154, 33

Conread position: 44-277
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 185

Conread position: 44-305
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 109

Conread position: 45-259
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 153, 124

Conread position: 45-262
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 147, 0

Conread position: 47-263
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 0

Conread position: 47-300
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 123

Conread position: 48-263
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 48-303
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 149, 67

Conread position: 51-309
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 49

Conread position: 52-303
Cow position:
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 119

Conread position: 54-263
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 54-287
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 123

Conread position: 56-299
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 107, 54

Conread position: 60-288
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 62-285
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 53

Conread position: 74-262
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 28

Conread position: 75-294
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 54

Conread position: 75-327
Cow position:
Alignm length: 259
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 79

Conread position: 80-288
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 108, 190

Conread position: 80-290
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 194

Conread position: 84-289
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 41

Conread position: 85-291
Cow position:
Alignm length: 207
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 88-262
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 110, 28

Conread position: 88-263
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 93-291
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 189, 59

Conread position: 93-311
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 81, 99

Conread position: 109-263
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 109-280
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 145, 133

Conread position: 465-880
Cow position:
Alignm length: 432
Alignm identity: 284
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 113, 9

Conread position: 466-888
Cow position:
Alignm length: 442
Alignm identity: 275
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 41

Conread position: 467-686
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 40

Conread position: 467-831
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 7

Conread position: 467-875
Cow position:
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 76

Conread position: 467-877
Cow position:
Alignm length: 428
Alignm identity: 265
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 163, 6

Conread position: 467-882
Cow position:
Alignm length: 433
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 111

Conread position: 467-886
Cow position:
Alignm length: 447
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 216

Conread position: 467-886
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 467-886
Cow position:
Alignm length: 432
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 76

Conread position: 467-886
Cow position:
Alignm length: 436
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 23

Conread position: 467-886
Cow position:
Alignm length: 438
Alignm identity: 292
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 89, 117

Conread position: 469-674
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 154, 73

Conread position: 470-886
Cow position:
Alignm length: 441
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 73

Conread position: 473-863
Cow position:
Alignm length: 393
Alignm identity: 265
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 93, 63

Conread position: 473-882
Cow position:
Alignm length: 423
Alignm identity: 265
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 96

Conread position: 474-885
Cow position:
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 81

Conread position: 475-888
Cow position:
Alignm length: 422
Alignm identity: 280
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 155, 32

Conread position: 476-886
Cow position:
Alignm length: 429
Alignm identity: 287
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 112, 84

Conread position: 476-886
Cow position:
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 76

Conread position: 476-886
Cow position:
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 64

Conread position: 478-882
Cow position:
Alignm length: 438
Alignm identity: 284
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 95

Conread position: 478-886
Cow position:
Alignm length: 432
Alignm identity: 293
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 65

Conread position: 509-882
Cow position:
Alignm length: 382
Alignm identity: 260
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 106, 56

Conread position: 516-886
Cow position:
Alignm length: 388
Alignm identity: 251
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 89

Conread position: 550-880
Cow position:
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 550-886
Cow position:
Alignm length: 367
Alignm identity: 254
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 248

Conread position: 557-882
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 29, 34

Conread position: 573-846
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 218

Conread position: 589-882
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 183

Conread position: 632-886
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 211

Conread position: 658-886
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 23

Conread position: 674-888
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 180

Conread position: 683-882
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 97, 169

Conread position: 696-888
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 160

Show alignments to all cow chromosomes.