Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-409 |
| Cow position: | chr1:25549793-25550198 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 1-482 |
| Cow position: | chr1:62244912-62244433 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 315 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 189, 25 |
| Conread position: | 1-482 |
| Cow position: | chr1:93854250-93854735 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 108, 42 |
| Conread position: | 1-482 |
| Cow position: | chr1:102435298-102434825 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 317 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 1-577 |
| Cow position: | chr1:22000227-21999642 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 379 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 1-577 |
| Cow position: | chr1:57567680-57568267 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 370 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 1-577 |
| Cow position: | chr1:88635108-88635686 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 34 |
| Conread position: | 1-599 |
| Cow position: | chr1:86699488-86698879 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 377 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 1-610 |
| Cow position: | chr1:99374708-99375301 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 2-275 |
| Cow position: | chr1:5501711-5501985 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 188, 35 |
| Conread position: | 2-438 |
| Cow position: | chr1:79920996-79920556 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 183, 33 |
| Conread position: | 2-482 |
| Cow position: | chr1:8554059-8554543 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 185, 35 |
| Conread position: | 2-482 |
| Cow position: | chr1:17013005-17012524 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 188, 33 |
| Conread position: | 2-482 |
| Cow position: | chr1:18244658-18244170 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 324 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 99, 33 |
| Conread position: | 2-482 |
| Cow position: | chr1:72656714-72657201 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 2-482 |
| Cow position: | chr1:82564236-82564718 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 174, 32 |
| Conread position: | 2-482 |
| Cow position: | chr1:89740508-89740054 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 188, 24 |
| Conread position: | 2-482 |
| Cow position: | chr1:101858244-101857771 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 174, 14 |
| Conread position: | 2-519 |
| Cow position: | chr1:89899970-89899445 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 350 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 2-571 |
| Cow position: | chr1:18880654-18880084 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 365 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 2-571 |
| Cow position: | chr1:40053090-40053664 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 366 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 193, 20 |
| Conread position: | 2-571 |
| Cow position: | chr1:62925344-62925922 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 356 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 2-577 |
| Cow position: | chr1:87244530-87245124 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 400 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 174, 40 |
| Conread position: | 2-578 |
| Cow position: | chr1:33851010-33851593 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 365 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 188, 40 |
| Conread position: | 2-578 |
| Cow position: | chr1:39543502-39544085 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 391 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 188, 33 |
| Conread position: | 2-578 |
| Cow position: | chr1:69536646-69537213 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 383 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 19 |
| Conread position: | 3-482 |
| Cow position: | chr1:59210397-59209924 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 203, 42 |
| Conread position: | 4-577 |
| Cow position: | chr1:33711794-33712379 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 379 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 4-577 |
| Cow position: | chr1:53046050-53045475 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 4-609 |
| Cow position: | chr1:63501200-63501801 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 5-268 |
| Cow position: | chr1:102555825-102556079 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 39 |
| Conread position: | 5-482 |
| Cow position: | chr1:1461590-1461117 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 5-577 |
| Cow position: | chr1:13645467-13646027 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 374 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 5-622 |
| Cow position: | chr1:57367402-57366778 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 398 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 9-482 |
| Cow position: | chr1:33895417-33895894 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 181, 28 |
| Conread position: | 10-425 |
| Cow position: | chr1:86608939-86609346 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 186, 63 |
| Conread position: | 11-220 |
| Cow position: | chr1:68219103-68218888 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 177, 35 |
| Conread position: | 12-482 |
| Cow position: | chr1:33388037-33388502 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 12-482 |
| Cow position: | chr1:101149588-101150047 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 312 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 164, 14 |
| Conread position: | 13-482 |
| Cow position: | chr1:31366340-31365862 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 300 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 13-482 |
| Cow position: | chr1:55276744-55276270 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 177, 22 |
| Conread position: | 13-578 |
| Cow position: | chr1:69766207-69766778 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 360 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 181, 22 |
| Conread position: | 14-577 |
| Cow position: | chr1:82918920-82918349 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 374 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 31-607 |
| Cow position: | chr1:19992915-19992344 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 34-275 |
| Cow position: | chr1:89809855-89809612 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 156, 11 |
| Conread position: | 35-577 |
| Cow position: | chr1:40307833-40308373 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 152, 10 |
| Conread position: | 35-623 |
| Cow position: | chr1:27306204-27305650 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 24 |
| Conread position: | 37-571 |
| Cow position: | chr1:40684925-40684382 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 344 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 157, 41 |
| Conread position: | 37-604 |
| Cow position: | chr1:99021189-99020618 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 25 |
| Conread position: | 37-609 |
| Cow position: | chr1:61738739-61738173 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 254 |
| Conread position: | 43-577 |
| Cow position: | chr1:69402763-69403295 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 334 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 45-482 |
| Cow position: | chr1:85781005-85780566 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 50-275 |
| Cow position: | chr1:62806028-62805796 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 50-276 |
| Cow position: | chr1:40513719-40513490 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 144, 28 |
| Conread position: | 50-296 |
| Cow position: | chr1:57661319-57661567 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 50-482 |
| Cow position: | chr1:18406412-18405983 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 50-482 |
| Cow position: | chr1:57656336-57656759 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 151, 23 |
| Conread position: | 50-547 |
| Cow position: | chr1:54366039-54365544 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 333 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 50-560 |
| Cow position: | chr1:56489617-56490138 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 50-571 |
| Cow position: | chr1:86548353-86547826 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 137, 28 |
| Conread position: | 50-575 |
| Cow position: | chr1:34689121-34689653 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 347 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 137, 37 |
| Conread position: | 50-577 |
| Cow position: | chr1:45097486-45098010 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 348 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 140, 28 |
| Conread position: | 50-578 |
| Cow position: | chr1:91898778-91899312 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 350 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 137, 95 |
| Conread position: | 50-599 |
| Cow position: | chr1:72981045-72981606 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 364 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 50-602 |
| Cow position: | chr1:28872855-28873408 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 366 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 50-609 |
| Cow position: | chr1:72136421-72136987 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 370 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 156, 23 |
| Conread position: | 50-615 |
| Cow position: | chr1:20828667-20829243 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 358 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 50-615 |
| Cow position: | chr1:67835360-67834787 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 363 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 50-634 |
| Cow position: | chr1:79637149-79636569 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 366 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 51-599 |
| Cow position: | chr1:25180252-25179692 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 360 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 139, 27 |
| Conread position: | 51-614 |
| Cow position: | chr1:30027762-30027201 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 378 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 51-619 |
| Cow position: | chr1:5318542-5319099 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 382 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 52-334 |
| Cow position: | chr1:32361333-32361052 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 52-387 |
| Cow position: | chr1:29950527-29950197 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 94, 28 |
| Conread position: | 52-487 |
| Cow position: | chr1:98783834-98784267 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 52-577 |
| Cow position: | chr1:71562795-71562260 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 142, 22 |
| Conread position: | 52-578 |
| Cow position: | chr1:21087197-21087729 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 342 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 25 |
| Conread position: | 52-578 |
| Cow position: | chr1:61308782-61309319 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 53-390 |
| Cow position: | chr1:13879916-13880263 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 53-614 |
| Cow position: | chr1:21356828-21356297 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 27 |
| Conread position: | 58-482 |
| Cow position: | chr1:52359490-52359063 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 132, 16 |
| Conread position: | 62-609 |
| Cow position: | chr1:82355518-82356065 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 64-623 |
| Cow position: | chr1:31422442-31421920 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 66-553 |
| Cow position: | chr1:84149208-84149708 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 343 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 71-276 |
| Cow position: | chr1:67313726-67313929 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 89 |
| Conread position: | 85-482 |
| Cow position: | chr1:52233300-52232901 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 85-584 |
| Cow position: | chr1:73009612-73010096 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 343 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 86-575 |
| Cow position: | chr1:52918803-52918316 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 345 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 88-575 |
| Cow position: | chr1:31330969-31330481 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 88-576 |
| Cow position: | chr1:38385466-38384990 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 39 |
| Conread position: | 88-609 |
| Cow position: | chr1:80556234-80555734 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 9 |
| Conread position: | 89-482 |
| Cow position: | chr1:28710732-28711131 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 157 |
| Conread position: | 92-436 |
| Cow position: | chr1:7144617-7144276 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 10 |
| Conread position: | 92-633 |
| Cow position: | chr1:79109116-79109638 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 98-578 |
| Cow position: | chr1:13450035-13450522 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 101-606 |
| Cow position: | chr1:59644682-59645181 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 352 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 21, 197 |
| Conread position: | 103-591 |
| Cow position: | chr1:15025739-15026221 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 103-609 |
| Cow position: | chr1:44101913-44101419 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 106-482 |
| Cow position: | chr1:99910784-99911173 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 70, 299 |
| Conread position: | 108-610 |
| Cow position: | chr1:18014356-18013842 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 208 |
| Conread position: | 109-603 |
| Cow position: | chr1:39482145-39481639 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 170 |
| Conread position: | 112-609 |
| Cow position: | chr1:30058379-30058883 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 354 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 117 |
| Conread position: | 185-578 |
| Cow position: | chr1:29362216-29362612 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 152, 85 |
| Conread position: | 186-594 |
| Cow position: | chr1:32342154-32341745 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 117 |
| Conread position: | 192-497 |
| Cow position: | chr1:20988879-20989189 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 134 |
| Conread position: | 244-609 |
| Cow position: | chr1:77655686-77656043 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 326-638 |
| Cow position: | chr1:98865093-98864771 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 350-573 |
| Cow position: | chr1:38396315-38396540 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 131, 45 |
| Conread position: | 350-609 |
| Cow position: | chr1:44138258-44137999 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 20 |
Show alignments to all cow chromosomes.