Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-482 |
| Cow position: | chr13:1593697-1593213 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 316 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 122, 36 |
| Conread position: | 1-537 |
| Cow position: | chr13:33336865-33336345 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 353 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 1-557 |
| Cow position: | chr13:15521056-15520493 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 355 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 1-577 |
| Cow position: | chr13:15924925-15924341 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 377 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 1-599 |
| Cow position: | chr13:4940544-4941155 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 380 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 2-480 |
| Cow position: | chr13:34692627-34693103 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 317 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 188, 14 |
| Conread position: | 2-481 |
| Cow position: | chr13:31832067-31832541 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 174, 33 |
| Conread position: | 2-482 |
| Cow position: | chr13:2908985-2908508 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 323 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 2-482 |
| Cow position: | chr13:30245275-30244791 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 322 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 2-510 |
| Cow position: | chr13:34187229-34186709 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 336 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 188, 31 |
| Conread position: | 2-571 |
| Cow position: | chr13:32986587-32986021 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 360 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 185, 32 |
| Conread position: | 2-571 |
| Cow position: | chr13:33825266-33824699 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 372 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 178, 30 |
| Conread position: | 2-571 |
| Cow position: | chr13:62328121-62327548 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 367 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 2-576 |
| Cow position: | chr13:34143199-34142616 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 2-578 |
| Cow position: | chr13:3276618-3277198 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 43 |
| Conread position: | 2-578 |
| Cow position: | chr13:21840735-21840151 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 361 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 2-578 |
| Cow position: | chr13:50108925-50109505 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 376 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 8-578 |
| Cow position: | chr13:4872545-4873118 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 357 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 16-276 |
| Cow position: | chr13:2305980-2306241 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 26-578 |
| Cow position: | chr13:13324240-13324792 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 363 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 150, 24 |
| Conread position: | 34-438 |
| Cow position: | chr13:33928066-33927672 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 286 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 157, 11 |
| Conread position: | 35-577 |
| Cow position: | chr13:35756731-35757284 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 358 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 40-623 |
| Cow position: | chr13:21130827-21131406 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 10 |
| Conread position: | 42-381 |
| Cow position: | chr13:2232157-2232505 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 134, 32 |
| Conread position: | 42-575 |
| Cow position: | chr13:22186219-22185699 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 31 |
| Conread position: | 50-482 |
| Cow position: | chr13:6668618-6668181 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 126, 30 |
| Conread position: | 50-482 |
| Cow position: | chr13:9044016-9044443 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 50-574 |
| Cow position: | chr13:31612830-31612298 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 346 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 140, 28 |
| Conread position: | 50-610 |
| Cow position: | chr13:34936644-34937225 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 378 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 52-615 |
| Cow position: | chr13:60701766-60701211 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 26 |
| Conread position: | 54-609 |
| Cow position: | chr13:31560703-31561259 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 88-577 |
| Cow position: | chr13:56730736-56730246 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 89-578 |
| Cow position: | chr13:49973226-49973727 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 157 |
| Conread position: | 92-486 |
| Cow position: | chr13:30140540-30140939 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 95, 194 |
| Conread position: | 95-482 |
| Cow position: | chr13:23003966-23003574 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 92, 240 |
| Conread position: | 423-623 |
| Cow position: | chr13:43850278-43850070 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 8, 96 |
Show alignments to all cow chromosomes.