Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-482 |
| Cow position: | chr18:19352159-19352643 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 193, 34 |
| Conread position: | 1-482 |
| Cow position: | chr18:41841052-41840567 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 309 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 1-577 |
| Cow position: | chr18:36508106-36508691 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 371 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 2-384 |
| Cow position: | chr18:17992782-17992401 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 163, 28 |
| Conread position: | 2-470 |
| Cow position: | chr18:1520904-1521375 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 2-482 |
| Cow position: | chr18:43147146-43146668 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 24 |
| Conread position: | 2-571 |
| Cow position: | chr18:33953793-33953223 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 361 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 2-577 |
| Cow position: | chr18:39748356-39748934 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 385 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 2-578 |
| Cow position: | chr18:55089151-55088565 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 192, 33 |
| Conread position: | 2-579 |
| Cow position: | chr18:22602261-22602848 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 361 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 2-625 |
| Cow position: | chr18:47741792-47742425 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 394 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 188, 33 |
| Conread position: | 3-379 |
| Cow position: | chr18:16660229-16659846 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 171, 32 |
| Conread position: | 4-482 |
| Cow position: | chr18:35335266-35335737 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 324 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 6-522 |
| Cow position: | chr18:32293553-32294069 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 333 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 184, 29 |
| Conread position: | 6-560 |
| Cow position: | chr18:23944592-23944034 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 366 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 10-571 |
| Cow position: | chr18:6869469-6868907 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 370 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 166, 16 |
| Conread position: | 16-482 |
| Cow position: | chr18:51257772-51258241 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 23-575 |
| Cow position: | chr18:37599736-37599187 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 358 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 23-578 |
| Cow position: | chr18:2019887-2019327 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 27-553 |
| Cow position: | chr18:16393844-16393313 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 40-637 |
| Cow position: | chr18:9186952-9186354 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 33 |
| Conread position: | 50-275 |
| Cow position: | chr18:45958515-45958736 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 50-571 |
| Cow position: | chr18:48221698-48222230 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 50-577 |
| Cow position: | chr18:16176785-16176259 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 353 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 140, 28 |
| Conread position: | 50-577 |
| Cow position: | chr18:53785662-53786196 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 352 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 50-578 |
| Cow position: | chr18:11275279-11274747 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 336 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 51-519 |
| Cow position: | chr18:33335693-33336165 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 139, 27 |
| Conread position: | 51-571 |
| Cow position: | chr18:51689449-51689976 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 333 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 51-609 |
| Cow position: | chr18:46878165-46877616 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 71-480 |
| Cow position: | chr18:18897334-18897749 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 77-572 |
| Cow position: | chr18:44601387-44601872 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 99-475 |
| Cow position: | chr18:29946064-29946433 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 105-578 |
| Cow position: | chr18:51341561-51342045 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 141 |
| Conread position: | 318-614 |
| Cow position: | chr18:16843241-16842949 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 409-596 |
| Cow position: | chr18:46869004-46868810 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 115 |
| Conread position: | 449-616 |
| Cow position: | chr18:4885352-4885178 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 153 |
Show alignments to all cow chromosomes.