Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-368 |
| Cow position: | chr19:29209344-29209711 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 173, 34 |
| Conread position: | 1-435 |
| Cow position: | chr19:55078523-55078961 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 292 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 1-482 |
| Cow position: | chr19:416431-416923 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 1-482 |
| Cow position: | chr19:33941389-33941872 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 304 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 1-557 |
| Cow position: | chr19:40852653-40852096 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 369 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 1-576 |
| Cow position: | chr19:10672529-10671945 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 376 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 175, 42 |
| Conread position: | 1-636 |
| Cow position: | chr19:893825-893200 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 418 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 190, 39 |
| Conread position: | 2-616 |
| Cow position: | chr19:15953637-15954234 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 402 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 2-622 |
| Cow position: | chr19:20111441-20110857 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 19 |
| Conread position: | 3-519 |
| Cow position: | chr19:32244464-32244991 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 333 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 113, 34 |
| Conread position: | 3-578 |
| Cow position: | chr19:7341856-7342431 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 375 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 191, 23 |
| Conread position: | 5-578 |
| Cow position: | chr19:32212286-32211710 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 359 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 189, 30 |
| Conread position: | 6-456 |
| Cow position: | chr19:30372068-30372510 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 170, 29 |
| Conread position: | 6-516 |
| Cow position: | chr19:42299720-42299198 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 324 |
| Conread position: | 7-240 |
| Cow position: | chr19:17018311-17018537 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 172, 15 |
| Conread position: | 8-571 |
| Cow position: | chr19:1031894-1032431 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 372 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 9-513 |
| Cow position: | chr19:39688330-39688828 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 330 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 10-632 |
| Cow position: | chr19:35979055-35979667 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 414 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 16-482 |
| Cow position: | chr19:32665326-32665787 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 35-466 |
| Cow position: | chr19:7405632-7405230 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 5 |
| Conread position: | 40-388 |
| Cow position: | chr19:32183629-32183290 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 153, 34 |
| Conread position: | 40-607 |
| Cow position: | chr19:7450182-7449634 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 75 |
| Conread position: | 43-575 |
| Cow position: | chr19:32202576-32203099 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 353 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 50-569 |
| Cow position: | chr19:30755002-30755523 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 349 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 50-578 |
| Cow position: | chr19:43143544-43144079 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 120, 25 |
| Conread position: | 53-571 |
| Cow position: | chr19:772428-772955 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 324 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 62-521 |
| Cow position: | chr19:40887806-40887348 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 93-614 |
| Cow position: | chr19:42248682-42249201 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 94-473 |
| Cow position: | chr19:359636-359255 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 304-614 |
| Cow position: | chr19:42649026-42648721 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 318-617 |
| Cow position: | chr19:17018564-17018853 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 408-609 |
| Cow position: | chr19:32183293-32183089 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 91, 108 |
Show alignments to all cow chromosomes.