Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-276 |
| Cow position: | chr20:20755686-20755408 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 1-482 |
| Cow position: | chr20:25851256-25850772 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 189, 42 |
| Conread position: | 1-553 |
| Cow position: | chr20:23469926-23469371 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 348 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 1-572 |
| Cow position: | chr20:21914060-21914640 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 379 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 115, 41 |
| Conread position: | 1-577 |
| Cow position: | chr20:12439027-12438441 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 389 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 1-577 |
| Cow position: | chr20:30684073-30684640 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 372 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 1-577 |
| Cow position: | chr20:37579193-37579744 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 380 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 1-578 |
| Cow position: | chr20:28160515-28161091 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 376 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 1-616 |
| Cow position: | chr20:22206282-22206895 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 407 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 2-482 |
| Cow position: | chr20:24614290-24614754 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 323 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 168, 19 |
| Conread position: | 2-571 |
| Cow position: | chr20:5560980-5560402 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 359 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 2-571 |
| Cow position: | chr20:8313698-8313127 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 376 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 4-482 |
| Cow position: | chr20:5483929-5484408 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 42 |
| Conread position: | 4-577 |
| Cow position: | chr20:35119310-35119889 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 342 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 6-358 |
| Cow position: | chr20:4799910-4799552 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 71 |
| Conread position: | 32-611 |
| Cow position: | chr20:9954206-9953632 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 380 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 35-529 |
| Cow position: | chr20:13665424-13664944 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 42-472 |
| Cow position: | chr20:11679336-11678900 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 145, 32 |
| Conread position: | 50-276 |
| Cow position: | chr20:35973630-35973394 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 50-482 |
| Cow position: | chr20:23798664-23799105 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 140, 28 |
| Conread position: | 50-482 |
| Cow position: | chr20:27868979-27869416 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 50-577 |
| Cow position: | chr20:3252351-3251815 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 349 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 58-306 |
| Cow position: | chr20:29572393-29572140 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 71-614 |
| Cow position: | chr20:20905385-20904858 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 354 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 203, 118 |
| Conread position: | 77-388 |
| Cow position: | chr20:18328246-18327940 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 68 |
| Conread position: | 80-611 |
| Cow position: | chr20:31379075-31378533 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 344 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 239 |
| Conread position: | 88-367 |
| Cow position: | chr20:22717872-22717586 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 105, 28 |
| Conread position: | 108-440 |
| Cow position: | chr20:24516871-24517208 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 223 |
| Conread position: | 219-500 |
| Cow position: | chr20:10841283-10841005 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 118, 72 |
| Conread position: | 297-510 |
| Cow position: | chr20:19367554-19367334 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 310-614 |
| Cow position: | chr20:8993596-8993292 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 325-570 |
| Cow position: | chr20:13434887-13434643 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 407-537 |
| Cow position: | chr20:18327793-18327666 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 512-623 |
| Cow position: | chr20:19367267-19367153 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.