Cow genome map

Conread name: Ss1.1-Ova1-OVRM10199F02.5

Conread position: 1-468
Cow position: chr22:33350849-33351319 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 324
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 21

Conread position: 1-482
Cow position: chr22:17329059-17328574 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 303
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 186, 36

Conread position: 1-482
Cow position: chr22:34168012-34168497 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 315
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 189, 36

Conread position: 1-599
Cow position: chr22:31335352-31334748 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 386
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 190, 36

Conread position: 2-151
Cow position: chr22:41237255-41237401 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 62, 25

Conread position: 2-401
Cow position: chr22:1321302-1321695 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 259
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 188, 19

Conread position: 2-482
Cow position: chr22:16200176-16200639 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 315
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 185, 40

Conread position: 2-578
Cow position: chr22:1878477-1879059 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 364
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 185, 24

Conread position: 3-482
Cow position: chr22:24949517-24949995 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 312
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 191, 42

Conread position: 3-577
Cow position: chr22:5672421-5673003 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 378
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 44

Conread position: 3-578
Cow position: chr22:10546338-10546912 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 363
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 184, 34

Conread position: 3-610
Cow position: chr22:7277205-7277816 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 398
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 168, 32

Conread position: 4-271
Cow position: chr22:35943705-35943442 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 186, 17

Conread position: 4-577
Cow position: chr22:1319079-1319663 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 31

Conread position: 9-578
Cow position: chr22:3278665-3278090 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 364
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 185, 26

Conread position: 9-578
Cow position: chr22:27310088-27309507 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 367
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 108, 26

Conread position: 9-602
Cow position: chr22:293475-292876 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 69

Conread position: 11-240
Cow position: chr22:10964878-10965112 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 176, 64

Conread position: 19-303
Cow position: chr22:13737751-13737471 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 214

Conread position: 35-482
Cow position: chr22:36736482-36736923 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 298
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 44

Conread position: 43-554
Cow position: chr22:11782809-11782290 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 7

Conread position: 46-552
Cow position: chr22:8149810-8149319 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 23

Conread position: 47-575
Cow position: chr22:32348242-32347727 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 351
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 123, 26

Conread position: 50-482
Cow position: chr22:19143969-19143534 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 276
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 126, 19

Conread position: 50-482
Cow position: chr22:41419955-41419529 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 273
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 165, 24

Conread position: 50-521
Cow position: chr22:37131381-37131848 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 309
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 28

Conread position: 50-557
Cow position: chr22:21589061-21589569 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 338
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 66, 37

Conread position: 50-578
Cow position: chr22:35672627-35672090 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 342
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 140, 24

Conread position: 50-602
Cow position: chr22:42990900-42991457 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 363
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 137, 24

Conread position: 50-610
Cow position: chr22:6503942-6503376 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 371
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 106, 24

Conread position: 50-613
Cow position: chr22:11030688-11031264 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 370
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 24

Conread position: 52-497
Cow position: chr22:36267107-36267548 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 297
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 57

Conread position: 53-482
Cow position: chr22:693363-693791 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 284
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 137, 22

Conread position: 70-188
Cow position: chr22:8874714-8874832 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 89-388
Cow position: chr22:1293730-1293421 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 241

Conread position: 92-576
Cow position: chr22:871086-870602 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 94-458
Cow position: chr22:27386660-27386290 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 236
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 191

Conread position: 94-575
Cow position: chr22:13917278-13917766 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 322
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 97, 22

Conread position: 105-610
Cow position: chr22:298552-298041 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 115

Conread position: 114-276
Cow position: chr22:13493304-13493464 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 131-269
Cow position: chr22:41237700-41237844 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 132-623
Cow position: chr22:34606872-34607370 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 158

Conread position: 175-571
Cow position: chr22:36533877-36533482 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 258
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 161, 32

Conread position: 183-632
Cow position: chr22:8874862-8875313 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 117

Conread position: 195-628
Cow position: chr22:36581286-36580867 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 71

Conread position: 197-513
Cow position: chr22:45975859-45976157 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 103

Conread position: 287-623
Cow position: chr22:21365433-21365085 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 27

Conread position: 310-571
Cow position: chr22:35943212-35942951 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 83

Conread position: 317-609
Cow position: chr22:41238174-41238468 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 366-609
Cow position: chr22:36592460-36592215 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 24

Show alignments to all cow chromosomes.