Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-482 |
| Cow position: | chr23:2795881-2795400 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 306 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 190, 36 |
| Conread position: | 1-577 |
| Cow position: | chr23:30636621-30636035 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 366 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 2-276 |
| Cow position: | chr23:8980807-8980531 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 2-481 |
| Cow position: | chr23:988959-988484 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 45 |
| Conread position: | 2-577 |
| Cow position: | chr23:4276640-4277219 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 33 |
| Conread position: | 2-578 |
| Cow position: | chr23:2313556-2312974 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 364 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 2-615 |
| Cow position: | chr23:20301893-20302515 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 387 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 4-482 |
| Cow position: | chr23:5779402-5778922 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 172, 70 |
| Conread position: | 5-579 |
| Cow position: | chr23:31446505-31447083 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 362 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 182, 27 |
| Conread position: | 9-622 |
| Cow position: | chr23:27399192-27399808 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 397 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 181, 34 |
| Conread position: | 10-578 |
| Cow position: | chr23:19950895-19950317 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 369 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 35-622 |
| Cow position: | chr23:26835999-26836580 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 152 |
| Conread position: | 37-638 |
| Cow position: | chr23:13508785-13509384 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 27 |
| Conread position: | 43-578 |
| Cow position: | chr23:4359551-4360096 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 350 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 50-269 |
| Cow position: | chr23:7750121-7750345 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 50-474 |
| Cow position: | chr23:11778214-11778628 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 237, 28 |
| Conread position: | 50-523 |
| Cow position: | chr23:15176803-15177287 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 140, 28 |
| Conread position: | 50-536 |
| Cow position: | chr23:34174912-34175401 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 329 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 50-570 |
| Cow position: | chr23:4434193-4434715 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 50-599 |
| Cow position: | chr23:4888409-4888962 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 356 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 58-276 |
| Cow position: | chr23:19017442-19017656 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 58-575 |
| Cow position: | chr23:19332660-19332146 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 362 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 86-482 |
| Cow position: | chr23:2524432-2524032 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 126 |
| Conread position: | 88-452 |
| Cow position: | chr23:2340168-2340530 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 141-603 |
| Cow position: | chr23:6216393-6216865 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 187 |
| Conread position: | 386-628 |
| Cow position: | chr23:3863016-3863265 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 95, 25 |
Show alignments to all cow chromosomes.