Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-482 |
| Cow position: | chr24:12085966-12086449 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 189, 36 |
| Conread position: | 2-388 |
| Cow position: | chr24:14390954-14390574 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 168, 33 |
| Conread position: | 2-405 |
| Cow position: | chr24:17187313-17187718 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 265 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 220, 35 |
| Conread position: | 2-482 |
| Cow position: | chr24:44017313-44017797 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 301 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 2-578 |
| Cow position: | chr24:6025329-6024746 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 373 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 192, 33 |
| Conread position: | 2-578 |
| Cow position: | chr24:6083784-6084369 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 379 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 192, 33 |
| Conread position: | 2-578 |
| Cow position: | chr24:22792944-22793524 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 366 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 2-599 |
| Cow position: | chr24:4415759-4415155 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 388 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 2-615 |
| Cow position: | chr24:6434008-6434628 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 386 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 188, 33 |
| Conread position: | 2-617 |
| Cow position: | chr24:6048025-6048617 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 32 |
| Conread position: | 4-482 |
| Cow position: | chr24:14885465-14885001 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 321 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 6-578 |
| Cow position: | chr24:9188960-9188380 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 360 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 181, 29 |
| Conread position: | 6-579 |
| Cow position: | chr24:36707631-36708199 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 376 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 180, 15 |
| Conread position: | 7-552 |
| Cow position: | chr24:6351968-6352509 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 354 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 273, 30 |
| Conread position: | 9-579 |
| Cow position: | chr24:12485543-12484963 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 357 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 178, 26 |
| Conread position: | 10-571 |
| Cow position: | chr24:8029926-8030496 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 358 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 177, 25 |
| Conread position: | 37-600 |
| Cow position: | chr24:14873540-14872977 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 36 |
| Conread position: | 38-275 |
| Cow position: | chr24:6511326-6511082 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 149, 12 |
| Conread position: | 43-468 |
| Cow position: | chr24:12161688-12162112 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 37 |
| Conread position: | 50-609 |
| Cow position: | chr24:35841799-35841237 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 379 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 52-578 |
| Cow position: | chr24:16084844-16084307 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 341 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 138, 26 |
| Conread position: | 55-582 |
| Cow position: | chr24:6537380-6537892 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 59-602 |
| Cow position: | chr24:40654236-40654762 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 344 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 192, 14 |
| Conread position: | 66-482 |
| Cow position: | chr24:36560252-36559836 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 110, 8 |
| Conread position: | 88-619 |
| Cow position: | chr24:17303745-17303223 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 336 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 89-557 |
| Cow position: | chr24:148763-148288 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 92-577 |
| Cow position: | chr24:9092418-9091933 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 315 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 95, 198 |
| Conread position: | 112-408 |
| Cow position: | chr24:36297036-36297345 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 142-442 |
| Cow position: | chr24:38635666-38635965 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 220-522 |
| Cow position: | chr24:14300833-14301142 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 170, 71 |
| Conread position: | 336-610 |
| Cow position: | chr24:6510723-6510447 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 54 |
Show alignments to all cow chromosomes.