Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10199F02.5 |
| Conread position: | 1-577 |
| Cow position: | chr25:8674638-8675224 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 374 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 1-577 |
| Cow position: | chr25:18890292-18889707 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 371 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 189, 41 |
| Conread position: | 1-610 |
| Cow position: | chr25:18092746-18093353 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 410 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 189, 25 |
| Conread position: | 2-482 |
| Cow position: | chr25:34656721-34656239 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 320 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 2-577 |
| Cow position: | chr25:11375617-11375041 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 383 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 189, 28 |
| Conread position: | 2-578 |
| Cow position: | chr25:20777172-20776594 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 373 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 187, 21 |
| Conread position: | 4-608 |
| Cow position: | chr25:20494093-20494690 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 31 |
| Conread position: | 8-577 |
| Cow position: | chr25:26278997-26279567 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 365 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 182, 15 |
| Conread position: | 8-578 |
| Cow position: | chr25:32579694-32580273 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 355 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 9-571 |
| Cow position: | chr25:35362688-35362128 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 178, 26 |
| Conread position: | 9-575 |
| Cow position: | chr25:36240279-36240853 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 9-610 |
| Cow position: | chr25:18255625-18255026 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 390 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 184, 71 |
| Conread position: | 12-571 |
| Cow position: | chr25:18276094-18275527 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 370 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 12-623 |
| Cow position: | chr25:3378992-3378393 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 34-482 |
| Cow position: | chr25:17468935-17468491 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 101, 11 |
| Conread position: | 37-295 |
| Cow position: | chr25:24171787-24172049 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 150, 37 |
| Conread position: | 50-482 |
| Cow position: | chr25:18027858-18027418 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 50-482 |
| Cow position: | chr25:22147266-22147702 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 50-482 |
| Cow position: | chr25:25506421-25506856 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 292 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 50-575 |
| Cow position: | chr25:19288576-19288041 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 50-578 |
| Cow position: | chr25:17589777-17589246 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 28 |
| Conread position: | 71-620 |
| Cow position: | chr25:11933734-11933180 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 367 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 89-488 |
| Cow position: | chr25:13454983-13454595 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 133-286 |
| Cow position: | chr25:37464389-37464546 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 187-516 |
| Cow position: | chr25:23345425-23345088 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 149, 102 |
| Conread position: | 432-609 |
| Cow position: | chr25:18235275-18235451 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 84 |
Show alignments to all cow chromosomes.