Cow genome map

Conread name: Ss1.1-Ova1-OVRM10199F02.5

Conread position: 1-264
Cow position: chr28:1168439-1168173 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 189, 36

Conread position: 1-264
Cow position: chr28:34593568-34593833 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 36

Conread position: 1-482
Cow position: chr28:7001713-7002199 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 317
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 175, 36

Conread position: 1-552
Cow position: chr28:17667787-17667229 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 360
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 175, 44

Conread position: 1-553
Cow position: chr28:10582260-10581701 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 359
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 190, 36

Conread position: 1-577
Cow position: chr28:17388206-17388792 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 374
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 166, 36

Conread position: 1-578
Cow position: chr28:1952864-1953440 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 366
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 193, 44

Conread position: 1-599
Cow position: chr28:782123-782729 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 379
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 190, 36

Conread position: 1-599
Cow position: chr28:1815142-1814533 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 385
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 108, 36

Conread position: 2-388
Cow position: chr28:10591645-10591267 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 72

Conread position: 2-435
Cow position: chr28:15950707-15951142 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 272
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 185, 33

Conread position: 2-519
Cow position: chr28:21358746-21359256 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 342
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 204, 33

Conread position: 2-571
Cow position: chr28:13441151-13440573 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 356
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 174, 33

Conread position: 2-577
Cow position: chr28:2591647-2592225 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 378
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 47

Conread position: 2-578
Cow position: chr28:14750274-14750857 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 369
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 185, 33

Conread position: 3-557
Cow position: chr28:13459698-13460259 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 357
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 34

Conread position: 3-577
Cow position: chr28:9953862-9954443 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 382
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 44

Conread position: 4-571
Cow position: chr28:9155552-9154982 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 377
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 131, 28

Conread position: 6-620
Cow position: chr28:34648672-34649292 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 410
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 24

Conread position: 8-513
Cow position: chr28:8721715-8721200 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 339
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 18, 74

Conread position: 9-497
Cow position: chr28:5565594-5566082 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 314
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 36

Conread position: 27-482
Cow position: chr28:4381066-4380635 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 301
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 251, 15

Conread position: 34-482
Cow position: chr28:7901114-7901564 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 305
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 159, 11

Conread position: 37-614
Cow position: chr28:18102166-18101608 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 36

Conread position: 50-260
Cow position: chr28:5752104-5751886 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 140, 24

Conread position: 50-276
Cow position: chr28:24652064-24652297 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 28

Conread position: 50-482
Cow position: chr28:7822027-7822467 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 289
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 24

Conread position: 50-482
Cow position: chr28:22261378-22260941 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 284
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 66, 28

Conread position: 50-557
Cow position: chr28:8378340-8378858 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 348
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 141, 24

Conread position: 50-577
Cow position: chr28:3193018-3192481 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 345
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 140, 24

Conread position: 50-577
Cow position: chr28:32792606-32792070 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 351
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 140, 24

Conread position: 50-578
Cow position: chr28:24587206-24587745 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 335
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 144, 24

Conread position: 51-578
Cow position: chr28:6780555-6780023 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 332
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 23

Conread position: 52-296
Cow position: chr28:34324603-34324851 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 22

Conread position: 52-482
Cow position: chr28:2083379-2083806 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 287
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 61, 26

Conread position: 78-600
Cow position: chr28:24667381-24667913 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 343
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 87, 59

Conread position: 85-610
Cow position: chr28:15585201-15585736 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 97-522
Cow position: chr28:12233155-12232744 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 297
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 19

Conread position: 135-312
Cow position: chr28:17311771-17311960 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 192-570
Cow position: chr28:9137127-9136749 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 15

Conread position: 317-544
Cow position: chr28:5800669-5800895 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 22, 74

Conread position: 326-608
Cow position: chr28:18181095-18180813 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 10, 67

Conread position: 371-610
Cow position: chr28:29437196-29436938 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 67, 16

Show alignments to all cow chromosomes.