Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
| Conread position: | 384-562 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 385-576 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 169 |
| Conread position: | 386-570 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 402-557 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 409-576 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 412-550 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 414-576 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 148 |
| Conread position: | 421-564 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 422-576 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 423-576 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 425-576 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 426-576 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 427-571 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 427-576 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 428-555 |
| Cow position: | |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 430-567 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 430-567 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 430-567 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 432-576 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 433-559 |
| Cow position: | |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 435-575 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 437-562 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 437-571 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 437-576 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 440-556 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-557 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 85 |
| Conread position: | 440-570 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 440-573 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 440-574 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-574 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 97 |
| Conread position: | 440-574 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 125 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 440-576 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 441-574 |
| Cow position: | |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 112, 83 |
| Conread position: | 441-576 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 441-576 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 441-576 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 441-576 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-576 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 72 |
| Conread position: | 442-558 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 442-576 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 442-576 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 443-576 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 445-570 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 445-576 |
| Cow position: | |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 445-576 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 446-567 |
| Cow position: | |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 37 |
| Conread position: | 447-576 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 450-576 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 458-569 |
| Cow position: | |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 467-571 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-571 |
| Cow position: | |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-575 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 84, 64 |
| Conread position: | 467-576 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 467-576 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 467-576 |
| Cow position: | |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 468-576 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 469-576 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 44 |
Show alignments to all cow chromosomes.