Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
| Conread position: | 416-576 |
| Cow position: | chr10:6490588-6490747 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 417-574 |
| Cow position: | chr10:16386034-16386186 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 421-576 |
| Cow position: | chr10:19704335-19704496 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 422-574 |
| Cow position: | chr10:32560878-32560719 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 430-576 |
| Cow position: | chr10:1041364-1041218 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 433-559 |
| Cow position: | chr10:49060597-49060468 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 433-576 |
| Cow position: | chr10:16683643-16683790 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 436-576 |
| Cow position: | chr10:52069813-52069957 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 137 |
| Conread position: | 439-570 |
| Cow position: | chr10:67144754-67144623 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-530 |
| Cow position: | chr10:11086341-11086251 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-542 |
| Cow position: | chr10:42005438-42005544 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 440-570 |
| Cow position: | chr10:69226086-69225948 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 440-571 |
| Cow position: | chr10:23404356-23404224 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 440-575 |
| Cow position: | chr10:11497379-11497239 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 440-576 |
| Cow position: | chr10:6038186-6038321 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 440-576 |
| Cow position: | chr10:6568383-6568248 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 440-576 |
| Cow position: | chr10:10124501-10124360 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr10:19590606-19590746 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 440-576 |
| Cow position: | chr10:30741532-30741397 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 440-576 |
| Cow position: | chr10:52889080-52889218 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 440-576 |
| Cow position: | chr10:61113344-61113206 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 440-576 |
| Cow position: | chr10:61426577-61426718 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 440-576 |
| Cow position: | chr10:65071960-65072099 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 440-576 |
| Cow position: | chr10:68566330-68566196 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 441-576 |
| Cow position: | chr10:38518480-38518611 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 71 |
| Conread position: | 442-568 |
| Cow position: | chr10:23096625-23096752 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 445-574 |
| Cow position: | chr10:49586313-49586448 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 445-576 |
| Cow position: | chr10:9341583-9341719 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 445-576 |
| Cow position: | chr10:52244494-52244630 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 445-576 |
| Cow position: | chr10:56705433-56705570 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 445-576 |
| Cow position: | chr10:64364370-64364233 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 446-576 |
| Cow position: | chr10:16649782-16649913 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 457-576 |
| Cow position: | chr10:58746110-58746232 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 467-564 |
| Cow position: | chr10:26620435-26620532 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-571 |
| Cow position: | chr10:42454245-42454140 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 467-576 |
| Cow position: | chr10:2266921-2267029 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 468-576 |
| Cow position: | chr10:48255099-48255208 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 468-576 |
| Cow position: | chr10:52589556-52589665 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 476-575 |
| Cow position: | chr10:1478315-1478414 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.