Cow genome map

Conread name: Ss1.1-Ova1-OVRM10204B04.5

Conread position: 390-576
Cow position: chr11:69402033-69402225 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 150

Conread position: 405-558
Cow position: chr11:33191427-33191581 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 21

Conread position: 407-567
Cow position: chr11:76851637-76851805 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 427-576
Cow position: chr11:53452172-53452326 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 433-576
Cow position: chr11:34136673-34136525 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 433-576
Cow position: chr11:40275430-40275578 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 433-576
Cow position: chr11:40278922-40279070 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 433-576
Cow position: chr11:67236566-67236421 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 435-576
Cow position: chr11:20491733-20491592 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 56

Conread position: 436-576
Cow position: chr11:372976-373121 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 436-576
Cow position: chr11:61427755-61427617 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 437-548
Cow position: chr11:50359495-50359608 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 12

Conread position: 437-574
Cow position: chr11:32072312-32072170 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 118

Conread position: 439-562
Cow position: chr11:60985117-60985240 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 439-574
Cow position: chr11:21136979-21136839 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 439-575
Cow position: chr11:32438787-32438927 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 85

Conread position: 440-536
Cow position: chr11:53977263-53977166 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 440-557
Cow position: chr11:44609724-44609602 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 440-558
Cow position: chr11:76856015-76856131 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 440-564
Cow position: chr11:7001765-7001894 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 440-564
Cow position: chr11:58112763-58112892 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 440-571
Cow position: chr11:52832562-52832693 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 111
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 440-574
Cow position: chr11:8828468-8828607 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 440-574
Cow position: chr11:43646246-43646387 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 440-575
Cow position: chr11:696186-696324 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 35, 12

Conread position: 440-575
Cow position: chr11:50953399-50953539 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 440-576
Cow position: chr11:19502132-19501992 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 120

Conread position: 440-576
Cow position: chr11:40269434-40269572 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 440-576
Cow position: chr11:49218183-49218325 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 440-576
Cow position: chr11:51745507-51745372 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 79

Conread position: 440-576
Cow position: chr11:76391862-76391999 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 440-576
Cow position: chr11:77008202-77008064 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 441-576
Cow position: chr11:22009223-22009364 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 441-576
Cow position: chr11:27722556-27722415 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 442-556
Cow position: chr11:72905331-72905213 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 442-562
Cow position: chr11:6041592-6041713 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 442-571
Cow position: chr11:6729830-6729696 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 442-576
Cow position: chr11:41272300-41272160 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 445-564
Cow position: chr11:45553912-45553792 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 445-570
Cow position: chr11:18913318-18913197 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 445-576
Cow position: chr11:54058150-54058014 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 445-576
Cow position: chr11:54244832-54244697 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 115

Conread position: 464-576
Cow position: chr11:50951690-50951580 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 467-564
Cow position: chr11:31422863-31422766 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 467-570
Cow position: chr11:76007511-76007408 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 467-576
Cow position: chr11:7684089-7683981 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 467-576
Cow position: chr11:14941478-14941587 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 467-576
Cow position: chr11:47193646-47193537 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.