Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
Conread position: | 390-576 |
Cow position: | chr11:69402033-69402225 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 141 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 25, 150 |
Conread position: | 405-558 |
Cow position: | chr11:33191427-33191581 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 21 |
Conread position: | 407-567 |
Cow position: | chr11:76851637-76851805 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 427-576 |
Cow position: | chr11:53452172-53452326 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 433-576 |
Cow position: | chr11:34136673-34136525 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 433-576 |
Cow position: | chr11:40275430-40275578 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 433-576 |
Cow position: | chr11:40278922-40279070 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 433-576 |
Cow position: | chr11:67236566-67236421 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 435-576 |
Cow position: | chr11:20491733-20491592 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 34, 56 |
Conread position: | 436-576 |
Cow position: | chr11:372976-373121 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 436-576 |
Cow position: | chr11:61427755-61427617 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 437-548 |
Cow position: | chr11:50359495-50359608 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 96 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 37, 12 |
Conread position: | 437-574 |
Cow position: | chr11:32072312-32072170 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 11, 118 |
Conread position: | 439-562 |
Cow position: | chr11:60985117-60985240 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 439-574 |
Cow position: | chr11:21136979-21136839 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 439-575 |
Cow position: | chr11:32438787-32438927 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 41, 85 |
Conread position: | 440-536 |
Cow position: | chr11:53977263-53977166 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 83 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 440-557 |
Cow position: | chr11:44609724-44609602 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 99 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 440-558 |
Cow position: | chr11:76856015-76856131 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 440-564 |
Cow position: | chr11:7001765-7001894 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 440-564 |
Cow position: | chr11:58112763-58112892 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 440-571 |
Cow position: | chr11:52832562-52832693 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 111 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 440-574 |
Cow position: | chr11:8828468-8828607 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 108 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 440-574 |
Cow position: | chr11:43646246-43646387 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 440-575 |
Cow position: | chr11:696186-696324 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 35, 12 |
Conread position: | 440-575 |
Cow position: | chr11:50953399-50953539 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 440-576 |
Cow position: | chr11:19502132-19501992 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 34, 120 |
Conread position: | 440-576 |
Cow position: | chr11:40269434-40269572 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 115 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 440-576 |
Cow position: | chr11:49218183-49218325 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 440-576 |
Cow position: | chr11:51745507-51745372 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 34, 79 |
Conread position: | 440-576 |
Cow position: | chr11:76391862-76391999 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 102 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 440-576 |
Cow position: | chr11:77008202-77008064 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 441-576 |
Cow position: | chr11:22009223-22009364 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 441-576 |
Cow position: | chr11:27722556-27722415 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 442-556 |
Cow position: | chr11:72905331-72905213 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 442-562 |
Cow position: | chr11:6041592-6041713 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 442-571 |
Cow position: | chr11:6729830-6729696 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 442-576 |
Cow position: | chr11:41272300-41272160 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 445-564 |
Cow position: | chr11:45553912-45553792 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 445-570 |
Cow position: | chr11:18913318-18913197 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 445-576 |
Cow position: | chr11:54058150-54058014 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 445-576 |
Cow position: | chr11:54244832-54244697 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 115 |
Conread position: | 464-576 |
Cow position: | chr11:50951690-50951580 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 467-564 |
Cow position: | chr11:31422863-31422766 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 82 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 467-570 |
Cow position: | chr11:76007511-76007408 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 84 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 467-576 |
Cow position: | chr11:7684089-7683981 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 467-576 |
Cow position: | chr11:14941478-14941587 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 91 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 467-576 |
Cow position: | chr11:47193646-47193537 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.