Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
| Conread position: | 416-571 |
| Cow position: | chr18:25970474-25970622 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 417-576 |
| Cow position: | chr18:15689451-15689293 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 135, 5 |
| Conread position: | 424-576 |
| Cow position: | chr18:20126944-20127098 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 424-576 |
| Cow position: | chr18:44493324-44493478 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 432-562 |
| Cow position: | chr18:51271588-51271727 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 432-575 |
| Cow position: | chr18:39503543-39503688 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 432-576 |
| Cow position: | chr18:43712203-43712057 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 433-576 |
| Cow position: | chr18:15831447-15831589 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 437-576 |
| Cow position: | chr18:2438615-2438755 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 440-571 |
| Cow position: | chr18:16448687-16448556 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-574 |
| Cow position: | chr18:26373069-26372930 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-575 |
| Cow position: | chr18:48717797-48717928 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 440-576 |
| Cow position: | chr18:7409155-7409294 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr18:22411463-22411604 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 73 |
| Conread position: | 440-576 |
| Cow position: | chr18:44408558-44408426 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 440-576 |
| Cow position: | chr18:55696879-55697016 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 441-548 |
| Cow position: | chr18:24671650-24671758 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 441-571 |
| Cow position: | chr18:50700832-50700700 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 441-576 |
| Cow position: | chr18:36478475-36478342 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 442-576 |
| Cow position: | chr18:10101632-10101496 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 445-550 |
| Cow position: | chr18:15267846-15267956 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 445-571 |
| Cow position: | chr18:14520175-14520048 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 445-576 |
| Cow position: | chr18:6158052-6157921 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-576 |
| Cow position: | chr18:21706047-21706176 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 445-576 |
| Cow position: | chr18:28794979-28794845 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 445-576 |
| Cow position: | chr18:32909185-32909058 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 445-576 |
| Cow position: | chr18:38126306-38126440 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 445-576 |
| Cow position: | chr18:51298623-51298488 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 467-575 |
| Cow position: | chr18:16298222-16298114 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 468-576 |
| Cow position: | chr18:16726764-16726656 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.