Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
| Conread position: | 388-571 |
| Cow position: | chr2:72902050-72902242 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 410-576 |
| Cow position: | chr2:38913882-38913712 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 417-567 |
| Cow position: | chr2:20915791-20915939 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 130, 71 |
| Conread position: | 432-565 |
| Cow position: | chr2:85460845-85460978 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-571 |
| Cow position: | chr2:45902062-45901922 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 440-558 |
| Cow position: | chr2:17566726-17566848 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 440-574 |
| Cow position: | chr2:8245701-8245559 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 440-575 |
| Cow position: | chr2:70664200-70664059 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:2937735-2937601 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 440-576 |
| Cow position: | chr2:13466208-13466074 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:15162920-15162786 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:17427353-17427212 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:33659519-33659661 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:41057343-41057482 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:41314070-41313935 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:48748548-48748685 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 440-576 |
| Cow position: | chr2:50515311-50515174 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 441-571 |
| Cow position: | chr2:42925472-42925337 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 441-576 |
| Cow position: | chr2:77981974-77982106 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 442-576 |
| Cow position: | chr2:32836369-32836233 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 443-576 |
| Cow position: | chr2:56752723-56752861 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 445-556 |
| Cow position: | chr2:51028131-51028015 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 449-571 |
| Cow position: | chr2:51041440-51041569 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 450-576 |
| Cow position: | chr2:46783683-46783557 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 457-576 |
| Cow position: | chr2:17342043-17341926 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 95, 11 |
| Conread position: | 458-576 |
| Cow position: | chr2:67758990-67759109 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 464-576 |
| Cow position: | chr2:21955288-21955175 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 467-576 |
| Cow position: | chr2:18061480-18061587 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 24 |
| Conread position: | 467-576 |
| Cow position: | chr2:68981859-68981969 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 470-575 |
| Cow position: | chr2:425961-425857 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.