Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
| Conread position: | 395-576 |
| Cow position: | chr24:23176499-23176681 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 424-573 |
| Cow position: | chr24:16315670-16315521 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 427-576 |
| Cow position: | chr24:27054576-27054427 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 125, 10 |
| Conread position: | 433-576 |
| Cow position: | chr24:25678183-25678040 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 433-576 |
| Cow position: | chr24:39350061-39350200 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 436-575 |
| Cow position: | chr24:34368846-34368989 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 437-557 |
| Cow position: | chr24:38292017-38291895 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 437-574 |
| Cow position: | chr24:44929509-44929367 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 437-576 |
| Cow position: | chr24:32758602-32758745 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 439-548 |
| Cow position: | chr24:13296520-13296628 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 439-576 |
| Cow position: | chr24:10546222-10546086 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 439-576 |
| Cow position: | chr24:16055353-16055495 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 439-576 |
| Cow position: | chr24:41332425-41332567 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 440-576 |
| Cow position: | chr24:2143906-2143766 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 440-576 |
| Cow position: | chr24:6427860-6427721 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 440-576 |
| Cow position: | chr24:15909778-15909636 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 440-576 |
| Cow position: | chr24:28279780-28279641 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr24:32158118-32158260 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr24:42942962-42943103 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 441-576 |
| Cow position: | chr24:22939844-22939708 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 445-576 |
| Cow position: | chr24:42916236-42916365 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 457-558 |
| Cow position: | chr24:23684751-23684853 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 467-567 |
| Cow position: | chr24:6246264-6246364 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-576 |
| Cow position: | chr24:25165160-25165050 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 476-576 |
| Cow position: | chr24:39474287-39474387 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 32 |
Show alignments to all cow chromosomes.