Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
| Conread position: | 402-576 |
| Cow position: | chr6:30160576-30160399 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 403-557 |
| Cow position: | chr6:24582977-24583132 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 408-562 |
| Cow position: | chr6:4023355-4023196 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 425-575 |
| Cow position: | chr6:48806777-48806928 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 426-576 |
| Cow position: | chr6:1732574-1732420 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 13 |
| Conread position: | 436-576 |
| Cow position: | chr6:14658825-14658686 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 436-576 |
| Cow position: | chr6:31225933-31225787 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 437-573 |
| Cow position: | chr6:17232231-17232366 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 438-576 |
| Cow position: | chr6:33985446-33985306 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 439-571 |
| Cow position: | chr6:64427448-64427310 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 439-576 |
| Cow position: | chr6:56376130-56376268 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 33, 71 |
| Conread position: | 440-574 |
| Cow position: | chr6:16626167-16626031 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 440-576 |
| Cow position: | chr6:827486-827627 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr6:7707355-7707213 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr6:13718986-13718844 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr6:15996999-15997137 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 440-576 |
| Cow position: | chr6:24545835-24545694 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 440-576 |
| Cow position: | chr6:50034513-50034646 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 440-576 |
| Cow position: | chr6:53674082-53673944 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 440-576 |
| Cow position: | chr6:53939185-53939044 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 440-576 |
| Cow position: | chr6:59496434-59496300 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 441-570 |
| Cow position: | chr6:6596786-6596658 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 441-576 |
| Cow position: | chr6:48572663-48572800 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 441-576 |
| Cow position: | chr6:62379919-62379785 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 445-556 |
| Cow position: | chr6:23986249-23986361 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 445-576 |
| Cow position: | chr6:37612322-37612186 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 445-576 |
| Cow position: | chr6:55475472-55475335 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 447-576 |
| Cow position: | chr6:7836116-7835995 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 464-574 |
| Cow position: | chr6:25224432-25224321 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 466-575 |
| Cow position: | chr6:15782324-15782433 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-570 |
| Cow position: | chr6:1907709-1907606 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-576 |
| Cow position: | chr6:29649295-29649186 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.